RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 RRBP1Q9P2E9 1410 aaKnown RBP29.39■■■□□ 2.3
CTDSP1-213ENST00000496785 PLPPR3Q6T4P5 718 aa29.39■■■□□ 2.3
CTDSP1-213ENST00000496785 RNF17Q9BXT8 1623 aaKnown RBP29.36■■■□□ 2.29
CTDSP1-213ENST00000496785 KDM5DQ9BY66 1539 aa29.35■■■□□ 2.29
CTDSP1-213ENST00000496785 CLTCQ00610 1675 aaKnown RBP29.34■■■□□ 2.29
CTDSP1-213ENST00000496785 C3P01024 1663 aa29.34■■■□□ 2.29
CTDSP1-213ENST00000496785 ZMYM3Q14202 1370 aa29.32■■■□□ 2.28
CTDSP1-213ENST00000496785 CEBPAP49715 358 aaPredicted RBP29.32■■■□□ 2.28
CTDSP1-213ENST00000496785 ROCK1Q13464 1354 aa29.31■■■□□ 2.28
CTDSP1-213ENST00000496785 WASHC2CQ9Y4E1 1318 aa29.3■■■□□ 2.28
CTDSP1-213ENST00000496785 NPATQ14207 1427 aa29.28■■■□□ 2.28
CTDSP1-213ENST00000496785 PTPRKQ15262 1439 aa29.28■■■□□ 2.28
CTDSP1-213ENST00000496785 ZC3H13Q5T200 1668 aaKnown RBP29.28■■■□□ 2.28
CTDSP1-213ENST00000496785 ITGAEP38570 1179 aa29.26■■■□□ 2.27
CTDSP1-213ENST00000496785 ANKRD50Q9ULJ7 1429 aa29.25■■■□□ 2.27
CTDSP1-213ENST00000496785 PREX1Q8TCU6 1659 aa29.25■■■□□ 2.27
CTDSP1-213ENST00000496785 SETD1BQ9UPS6 1966 aaKnown RBP29.24■■■□□ 2.27
CTDSP1-213ENST00000496785 PRDM15P57071 1507 aaPredicted RBP29.24■■■□□ 2.27
CTDSP1-213ENST00000496785 KANK1Q14678 1352 aa29.23■■■□□ 2.27
CTDSP1-213ENST00000496785 MROH1Q8NDA8 1641 aa29.23■■■□□ 2.27
CTDSP1-213ENST00000496785 LMTK3Q96Q04 1460 aa29.23■■■□□ 2.27
CTDSP1-213ENST00000496785 UHRF1BP1Q6BDS2 1440 aa29.22■■■□□ 2.27
CTDSP1-213ENST00000496785 DEPDC5O75140 1603 aa29.21■■■□□ 2.27
CTDSP1-213ENST00000496785 ABCC3O15438 1527 aa29.2■■■□□ 2.27
CTDSP1-213ENST00000496785 PZPP20742 1482 aa29.18■■■□□ 2.26
CTDSP1-213ENST00000496785 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.15■■■□□ 2.26
CTDSP1-213ENST00000496785 CEP152O94986 1710 aa29.11■■■□□ 2.25
CTDSP1-213ENST00000496785 CAMSAP1Q5T5Y3 1602 aa29.1■■■□□ 2.25
CTDSP1-213ENST00000496785 LMTK2Q8IWU2 1503 aa29.09■■■□□ 2.25
CTDSP1-213ENST00000496785 VWDEQ8N2E2 1590 aa29.09■■■□□ 2.25
CTDSP1-213ENST00000496785 ARHGAP31Q2M1Z3 1444 aa29.08■■■□□ 2.25
CTDSP1-213ENST00000496785 TNRQ92752 1358 aa29.07■■■□□ 2.24
CTDSP1-213ENST00000496785 MYO3AQ8NEV4 1616 aa29.06■■■□□ 2.24
CTDSP1-213ENST00000496785 UNC13BO14795 1591 aa29.05■■■□□ 2.24
CTDSP1-213ENST00000496785 HSPA2P54652 639 aa29.04■■■□□ 2.24
CTDSP1-213ENST00000496785 FBXO31Q5XUX0 539 aaPredicted RBP29.03■■■□□ 2.24
CTDSP1-213ENST00000496785 ZNF142P52746 1687 aaPredicted RBP29.02■■■□□ 2.24
CTDSP1-213ENST00000496785 SPATA31D1Q6ZQQ2 1576 aa29.01■■■□□ 2.24
CTDSP1-213ENST00000496785 ERVK-7P63135 1459 aa29.01■■■□□ 2.23
CTDSP1-213ENST00000496785 GCC2Q8IWJ2 1684 aa29.01■■■□□ 2.23
CTDSP1-213ENST00000496785 HFM1A2PYH4 1435 aa29.01■■■□□ 2.23
CTDSP1-213ENST00000496785 NAIPQ13075 1403 aa29■■■□□ 2.23
CTDSP1-213ENST00000496785 CEP170BQ9Y4F5 1589 aaPredicted RBP29■■■□□ 2.23
CTDSP1-213ENST00000496785 NLRP1Q9C000 1473 aa28.99■■■□□ 2.23
CTDSP1-213ENST00000496785 EFCAB6Q5THR3 1501 aa28.99■■■□□ 2.23
CTDSP1-213ENST00000496785 A2ML1A8K2U0 1454 aa28.98■■■□□ 2.23
CTDSP1-213ENST00000496785 RPRD2Q5VT52 1461 aaKnown RBP28.95■■■□□ 2.22
CTDSP1-213ENST00000496785 TET3O43151 1660 aa28.95■■■□□ 2.22
CTDSP1-213ENST00000496785 IQGAP3Q86VI3 1631 aa28.94■■■□□ 2.22
CTDSP1-213ENST00000496785 NUP155O75694 1391 aa28.93■■■□□ 2.22
CTDSP1-213ENST00000496785 DMRT2Q9Y5R5 561 aa28.89■■■□□ 2.22
CTDSP1-213ENST00000496785 PLA2R1Q13018 1463 aa28.89■■■□□ 2.22
CTDSP1-213ENST00000496785 CFAP65Q6ZU64 1925 aaKnown RBP28.86■■■□□ 2.21
CTDSP1-213ENST00000496785 UGGT1Q9NYU2 1555 aa28.86■■■□□ 2.21
CTDSP1-213ENST00000496785 THEMISQ8N1K5 641 aaPredicted RBP28.85■■■□□ 2.21
CTDSP1-213ENST00000496785 ACIN1Q9UKV3 1341 aaKnown RBP28.84■■■□□ 2.21
CTDSP1-213ENST00000496785 NOS1P29475 1434 aa28.84■■■□□ 2.21
CTDSP1-213ENST00000496785 PKD2Q13563 968 aa28.81■■■□□ 2.2
CTDSP1-213ENST00000496785 STRCQ7RTU9 1775 aa28.8■■■□□ 2.2
CTDSP1-213ENST00000496785 SLC52A1Q9NWF4 448 aa28.79■■■□□ 2.2
CTDSP1-213ENST00000496785 E9PCH4 1651 aa28.78■■■□□ 2.2
CTDSP1-213ENST00000496785 TRIM52Q96A61 297 aa28.78■■■□□ 2.2
CTDSP1-213ENST00000496785 PTPRTO14522 1441 aa28.77■■■□□ 2.2
CTDSP1-213ENST00000496785 SYNMO15061 1565 aa28.77■■■□□ 2.2
CTDSP1-213ENST00000496785 STAG3Q9UJ98 1225 aa28.75■■■□□ 2.19
CTDSP1-213ENST00000496785 SETD5Q9C0A6 1442 aa28.74■■■□□ 2.19
CTDSP1-213ENST00000496785 KDM5AP29375 1690 aaKnown RBP28.74■■■□□ 2.19
CTDSP1-213ENST00000496785 UBR1Q8IWV7 1749 aa28.73■■■□□ 2.19
CTDSP1-213ENST00000496785 ANKLE2Q86XL3 938 aa28.72■■■□□ 2.19
CTDSP1-213ENST00000496785 PIK3C2BO00750 1634 aa28.72■■■□□ 2.19
CTDSP1-213ENST00000496785 IDI1Q13907 227 aa28.71■■■□□ 2.19
CTDSP1-213ENST00000496785 NCKAP5LQ9HCH0 1330 aa28.7■■■□□ 2.19
CTDSP1-213ENST00000496785 POLR1AO95602 1720 aaPredicted RBP28.69■■■□□ 2.18
CTDSP1-213ENST00000496785 SLC4A1APQ9BWU0 796 aaKnown RBP28.67■■■□□ 2.18
CTDSP1-213ENST00000496785 ADGRB3O60242 1522 aa28.67■■■□□ 2.18
CTDSP1-213ENST00000496785 SLIT1O75093 1534 aa28.65■■■□□ 2.18
CTDSP1-213ENST00000496785 SPHKAPQ2M3C7 1700 aa28.63■■■□□ 2.17
CTDSP1-213ENST00000496785 ARHGAP23Q9P227 1491 aa28.63■■■□□ 2.17
CTDSP1-213ENST00000496785 EID1Q9Y6B2 187 aa28.62■■■□□ 2.17
CTDSP1-213ENST00000496785 TMEM2Q9UHN6 1383 aa28.62■■■□□ 2.17
CTDSP1-213ENST00000496785 MED14O60244 1454 aa28.61■■■□□ 2.17
CTDSP1-213ENST00000496785 RAB3GAP2Q9H2M9 1393 aa28.61■■■□□ 2.17
CTDSP1-213ENST00000496785 NEURL4Q96JN8 1562 aa28.6■■■□□ 2.17
CTDSP1-213ENST00000496785 SCAF11Q99590 1463 aaKnown RBP28.59■■■□□ 2.17
CTDSP1-213ENST00000496785 NPHP4O75161 1426 aaPredicted RBP28.59■■■□□ 2.17
CTDSP1-213ENST00000496785 TRPM2O94759 1503 aa28.58■■■□□ 2.17
CTDSP1-213ENST00000496785 HRCP23327 699 aa28.56■■■□□ 2.16
CTDSP1-213ENST00000496785 HDGFP51858 240 aaKnown RBP28.56■■■□□ 2.16
CTDSP1-213ENST00000496785 TXNDC2Q86VQ3 553 aa28.56■■■□□ 2.16
CTDSP1-213ENST00000496785 TMEM131LA2VDJ0 1609 aa28.55■■■□□ 2.16
CTDSP1-213ENST00000496785 CHGAP10645 457 aaKnown RBP28.55■■■□□ 2.16
CTDSP1-213ENST00000496785 MPHOSPH9Q99550 1183 aa28.54■■■□□ 2.16
CTDSP1-213ENST00000496785 IQGAP1P46940 1657 aa28.53■■■□□ 2.16
CTDSP1-213ENST00000496785 LTKP29376 864 aa28.49■■■□□ 2.15
CTDSP1-213ENST00000496785 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.48■■■□□ 2.15
CTDSP1-213ENST00000496785 RIMS2Q9UQ26 1411 aa28.47■■■□□ 2.15
CTDSP1-213ENST00000496785 CLTCL1P53675 1640 aa28.47■■■□□ 2.15
CTDSP1-213ENST00000496785 MYO5BQ9ULV0 1848 aa28.46■■■□□ 2.15
CTDSP1-213ENST00000496785 ZFYVE9O95405 1425 aa28.45■■■□□ 2.15
CTDSP1-213ENST00000496785 PPP1R15AO75807 674 aaPredicted RBP28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms