RNA–Protein interactions for RNA: ENST00000496728.1

TSC22D4-206, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-206ENST00000496728 ROCK1Q13464 1354 aa30.66■■■□□ 2.5
TSC22D4-206ENST00000496728 ERBINQ96RT1 1412 aa30.66■■■□□ 2.5
TSC22D4-206ENST00000496728 CEBPAP49715 358 aaPredicted RBP30.62■■■□□ 2.49
TSC22D4-206ENST00000496728 WASHC2CQ9Y4E1 1318 aa30.61■■■□□ 2.49
TSC22D4-206ENST00000496728 EIF2AK4Q9P2K8 1649 aaKnown RBP30.6■■■□□ 2.49
TSC22D4-206ENST00000496728 ANKRD50Q9ULJ7 1429 aa30.58■■■□□ 2.49
TSC22D4-206ENST00000496728 ZMYM3Q14202 1370 aa30.57■■■□□ 2.48
TSC22D4-206ENST00000496728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.55■■■□□ 2.48
TSC22D4-206ENST00000496728 FAM135AQ9P2D6 1515 aa30.52■■■□□ 2.48
TSC22D4-206ENST00000496728 RNF17Q9BXT8 1623 aaKnown RBP30.52■■■□□ 2.48
TSC22D4-206ENST00000496728 KDM5DQ9BY66 1539 aa30.51■■■□□ 2.47
TSC22D4-206ENST00000496728 KANK1Q14678 1352 aa30.5■■■□□ 2.47
TSC22D4-206ENST00000496728 CLTCQ00610 1675 aaKnown RBP30.49■■■□□ 2.47
TSC22D4-206ENST00000496728 MROH2AA6NES4 1674 aa30.47■■■□□ 2.47
TSC22D4-206ENST00000496728 MROH1Q8NDA8 1641 aa30.44■■■□□ 2.46
TSC22D4-206ENST00000496728 C3P01024 1663 aa30.44■■■□□ 2.46
TSC22D4-206ENST00000496728 ABCC3O15438 1527 aa30.42■■■□□ 2.46
TSC22D4-206ENST00000496728 PRDM15P57071 1507 aaPredicted RBP30.42■■■□□ 2.46
TSC22D4-206ENST00000496728 NPATQ14207 1427 aa30.41■■■□□ 2.46
TSC22D4-206ENST00000496728 DEPDC5O75140 1603 aa30.39■■■□□ 2.46
TSC22D4-206ENST00000496728 NAIPQ13075 1403 aa30.39■■■□□ 2.45
TSC22D4-206ENST00000496728 HFM1A2PYH4 1435 aa30.37■■■□□ 2.45
TSC22D4-206ENST00000496728 PZPP20742 1482 aa30.37■■■□□ 2.45
TSC22D4-206ENST00000496728 ZC3H13Q5T200 1668 aaKnown RBP30.36■■■□□ 2.45
TSC22D4-206ENST00000496728 FBXO31Q5XUX0 539 aaPredicted RBP30.36■■■□□ 2.45
TSC22D4-206ENST00000496728 UHRF1BP1Q6BDS2 1440 aa30.34■■■□□ 2.45
TSC22D4-206ENST00000496728 SETD1BQ9UPS6 1966 aaKnown RBP30.32■■■□□ 2.44
TSC22D4-206ENST00000496728 VWDEQ8N2E2 1590 aa30.31■■■□□ 2.44
TSC22D4-206ENST00000496728 NUP155O75694 1391 aa30.3■■■□□ 2.44
TSC22D4-206ENST00000496728 LMTK2Q8IWU2 1503 aa30.3■■■□□ 2.44
TSC22D4-206ENST00000496728 LMTK3Q96Q04 1460 aa30.3■■■□□ 2.44
TSC22D4-206ENST00000496728 ARHGAP31Q2M1Z3 1444 aa30.3■■■□□ 2.44
TSC22D4-206ENST00000496728 CEP152O94986 1710 aa30.29■■■□□ 2.44
TSC22D4-206ENST00000496728 TNRQ92752 1358 aa30.28■■■□□ 2.44
TSC22D4-206ENST00000496728 UNC13BO14795 1591 aa30.27■■■□□ 2.44
TSC22D4-206ENST00000496728 CAMSAP1Q5T5Y3 1602 aa30.26■■■□□ 2.44
TSC22D4-206ENST00000496728 HSPA2P54652 639 aa30.25■■■□□ 2.43
TSC22D4-206ENST00000496728 GCC2Q8IWJ2 1684 aa30.25■■■□□ 2.43
TSC22D4-206ENST00000496728 PREX1Q8TCU6 1659 aa30.24■■■□□ 2.43
TSC22D4-206ENST00000496728 TRIM52Q96A61 297 aa30.23■■■□□ 2.43
TSC22D4-206ENST00000496728 ERVK-7P63135 1459 aa30.21■■■□□ 2.43
TSC22D4-206ENST00000496728 SETD5Q9C0A6 1442 aa30.18■■■□□ 2.42
TSC22D4-206ENST00000496728 EFCAB6Q5THR3 1501 aa30.17■■■□□ 2.42
TSC22D4-206ENST00000496728 SPATA31D1Q6ZQQ2 1576 aa30.17■■■□□ 2.42
TSC22D4-206ENST00000496728 IQGAP3Q86VI3 1631 aa30.15■■■□□ 2.42
TSC22D4-206ENST00000496728 RPRD2Q5VT52 1461 aaKnown RBP30.15■■■□□ 2.42
TSC22D4-206ENST00000496728 ACIN1Q9UKV3 1341 aaKnown RBP30.15■■■□□ 2.42
TSC22D4-206ENST00000496728 NLRP1Q9C000 1473 aa30.14■■■□□ 2.42
TSC22D4-206ENST00000496728 TET3O43151 1660 aa30.14■■■□□ 2.41
TSC22D4-206ENST00000496728 MYO3AQ8NEV4 1616 aa30.13■■■□□ 2.41
TSC22D4-206ENST00000496728 A2ML1A8K2U0 1454 aa30.12■■■□□ 2.41
TSC22D4-206ENST00000496728 CEP170BQ9Y4F5 1589 aaPredicted RBP30.1■■■□□ 2.41
TSC22D4-206ENST00000496728 NOS1P29475 1434 aa30.09■■■□□ 2.41
TSC22D4-206ENST00000496728 SLC4A1APQ9BWU0 796 aaKnown RBP30.08■■■□□ 2.41
TSC22D4-206ENST00000496728 CFAP65Q6ZU64 1925 aaKnown RBP30.08■■■□□ 2.41
TSC22D4-206ENST00000496728 THEMISQ8N1K5 641 aaPredicted RBP30.07■■■□□ 2.4
TSC22D4-206ENST00000496728 RAB3GAP2Q9H2M9 1393 aa30.06■■■□□ 2.4
TSC22D4-206ENST00000496728 SLC52A1Q9NWF4 448 aa30.06■■■□□ 2.4
TSC22D4-206ENST00000496728 ZNF142P52746 1687 aaPredicted RBP30.04■■■□□ 2.4
TSC22D4-206ENST00000496728 IDI1Q13907 227 aa30.04■■■□□ 2.4
TSC22D4-206ENST00000496728 PKD2Q13563 968 aa30.03■■■□□ 2.4
TSC22D4-206ENST00000496728 STAG3Q9UJ98 1225 aa30.03■■■□□ 2.4
TSC22D4-206ENST00000496728 UGGT1Q9NYU2 1555 aa30.02■■■□□ 2.4
TSC22D4-206ENST00000496728 HRCP23327 699 aa30■■■□□ 2.39
TSC22D4-206ENST00000496728 E9PCH4 1651 aa30■■■□□ 2.39
TSC22D4-206ENST00000496728 TRIM26Q12899 539 aaPredicted RBP29.99■■■□□ 2.39
TSC22D4-206ENST00000496728 MPHOSPH9Q99550 1183 aa29.98■■■□□ 2.39
TSC22D4-206ENST00000496728 DMRT2Q9Y5R5 561 aa29.98■■■□□ 2.39
TSC22D4-206ENST00000496728 SYNMO15061 1565 aa29.98■■■□□ 2.39
TSC22D4-206ENST00000496728 PLA2R1Q13018 1463 aa29.96■■■□□ 2.39
TSC22D4-206ENST00000496728 NCKAP5LQ9HCH0 1330 aa29.95■■■□□ 2.38
TSC22D4-206ENST00000496728 ANKLE2Q86XL3 938 aa29.94■■■□□ 2.38
TSC22D4-206ENST00000496728 PTPRTO14522 1441 aa29.92■■■□□ 2.38
TSC22D4-206ENST00000496728 CHGAP10645 457 aaKnown RBP29.9■■■□□ 2.38
TSC22D4-206ENST00000496728 PIK3C2BO00750 1634 aa29.88■■■□□ 2.37
TSC22D4-206ENST00000496728 FOXD1Q16676 465 aa29.87■■■□□ 2.37
TSC22D4-206ENST00000496728 STRCQ7RTU9 1775 aa29.85■■■□□ 2.37
TSC22D4-206ENST00000496728 EID1Q9Y6B2 187 aa29.85■■■□□ 2.37
TSC22D4-206ENST00000496728 UBR1Q8IWV7 1749 aa29.85■■■□□ 2.37
TSC22D4-206ENST00000496728 TMEM2Q9UHN6 1383 aa29.83■■■□□ 2.37
TSC22D4-206ENST00000496728 TXNDC2Q86VQ3 553 aa29.83■■■□□ 2.37
TSC22D4-206ENST00000496728 ADGRB3O60242 1522 aa29.82■■■□□ 2.36
TSC22D4-206ENST00000496728 SPHKAPQ2M3C7 1700 aa29.82■■■□□ 2.36
TSC22D4-206ENST00000496728 TRPM2O94759 1503 aa29.8■■■□□ 2.36
TSC22D4-206ENST00000496728 KDM5AP29375 1690 aaKnown RBP29.79■■■□□ 2.36
TSC22D4-206ENST00000496728 HDGFP51858 240 aaKnown RBP29.79■■■□□ 2.36
TSC22D4-206ENST00000496728 SLIT1O75093 1534 aa29.79■■■□□ 2.36
TSC22D4-206ENST00000496728 ARHGAP23Q9P227 1491 aa29.79■■■□□ 2.36
TSC22D4-206ENST00000496728 LTKP29376 864 aa29.78■■■□□ 2.36
TSC22D4-206ENST00000496728 SCAF11Q99590 1463 aaKnown RBP29.76■■■□□ 2.35
TSC22D4-206ENST00000496728 NPHP4O75161 1426 aaPredicted RBP29.74■■■□□ 2.35
TSC22D4-206ENST00000496728 TMEM131LA2VDJ0 1609 aa29.74■■■□□ 2.35
TSC22D4-206ENST00000496728 ZNF326Q5BKZ1 582 aaKnown RBP29.72■■■□□ 2.35
TSC22D4-206ENST00000496728 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.72■■■□□ 2.35
TSC22D4-206ENST00000496728 MED14O60244 1454 aa29.72■■■□□ 2.35
TSC22D4-206ENST00000496728 CLTCL1P53675 1640 aa29.71■■■□□ 2.35
TSC22D4-206ENST00000496728 CCDC144AA2RUR9 1427 aa29.71■■■□□ 2.35
TSC22D4-206ENST00000496728 RIMS2Q9UQ26 1411 aa29.71■■■□□ 2.35
TSC22D4-206ENST00000496728 PPP1R15AO75807 674 aaPredicted RBP29.7■■■□□ 2.35
TSC22D4-206ENST00000496728 NEURL4Q96JN8 1562 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms