RNA–Protein interactions for RNA: ENST00000496580.1

LRP8-211, Transcript of LDL receptor related protein 8, humanhuman

TSL 2

Gene LRP8, Length 507 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-211ENST00000496580 TIAM1Q13009 1591 aa18.25■□□□□ 0.51
LRP8-211ENST00000496580 ZNF644Q9H582 1327 aaPredicted RBP18.24■□□□□ 0.51
LRP8-211ENST00000496580 VWDEQ8N2E2 1590 aa18.23■□□□□ 0.51
LRP8-211ENST00000496580 MBD5Q9P267 1494 aa18.23■□□□□ 0.51
LRP8-211ENST00000496580 FBXO31Q5XUX0 539 aaPredicted RBP18.23■□□□□ 0.51
LRP8-211ENST00000496580 TNRQ92752 1358 aa18.22■□□□□ 0.51
LRP8-211ENST00000496580 TOM1O60784 492 aa18.22■□□□□ 0.51
LRP8-211ENST00000496580 PZPP20742 1482 aa18.2■□□□□ 0.5
LRP8-211ENST00000496580 MTUS2Q5JR59 1369 aa18.19■□□□□ 0.5
LRP8-211ENST00000496580 DHX29Q7Z478 1369 aaKnown RBP18.19■□□□□ 0.5
LRP8-211ENST00000496580 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.19■□□□□ 0.51e-6■■■■■ 32.9
LRP8-211ENST00000496580 KDM5DQ9BY66 1539 aa18.19■□□□□ 0.5
LRP8-211ENST00000496580 RTEL1-TNFRSF6BF6WH68 1400 aa18.17■□□□□ 0.5
LRP8-211ENST00000496580 STRCP1A6NGW2 1772 aa18.17■□□□□ 0.5
LRP8-211ENST00000496580 KIF3BO15066 747 aa18.16■□□□□ 0.5
LRP8-211ENST00000496580 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
LRP8-211ENST00000496580 NPHP4O75161 1426 aaPredicted RBP18.15■□□□□ 0.5
LRP8-211ENST00000496580 EHBP1L1Q8N3D4 1523 aa18.15■□□□□ 0.5
LRP8-211ENST00000496580 PHF23Q9BUL5 403 aaPredicted RBP18.15■□□□□ 0.5
LRP8-211ENST00000496580 UGGT1Q9NYU2 1555 aa18.14■□□□□ 0.49
LRP8-211ENST00000496580 DEPDC5O75140 1603 aa18.14■□□□□ 0.49
LRP8-211ENST00000496580 IQGAP1P46940 1657 aa18.13■□□□□ 0.49
LRP8-211ENST00000496580 ANKLE2Q86XL3 938 aa18.13■□□□□ 0.49
LRP8-211ENST00000496580 MED14O60244 1454 aa18.13■□□□□ 0.49
LRP8-211ENST00000496580 FAM135AQ9P2D6 1515 aa18.13■□□□□ 0.49
LRP8-211ENST00000496580 MIA2Q96PC5 1412 aa18.12■□□□□ 0.49
LRP8-211ENST00000496580 CCDC141Q6ZP82 1450 aa18.12■□□□□ 0.49
LRP8-211ENST00000496580 NLRP1Q9C000 1473 aa18.12■□□□□ 0.49
LRP8-211ENST00000496580 LRRC7Q96NW7 1537 aa18.1■□□□□ 0.49
LRP8-211ENST00000496580 WASHC2CQ9Y4E1 1318 aa18.1■□□□□ 0.49
LRP8-211ENST00000496580 RNF17Q9BXT8 1623 aaKnown RBP18.09■□□□□ 0.49
LRP8-211ENST00000496580 CAMSAP2Q08AD1 1489 aa18.09■□□□□ 0.49
LRP8-211ENST00000496580 CEP162Q5TB80 1403 aa18.09■□□□□ 0.49
LRP8-211ENST00000496580 THEMISQ8N1K5 641 aaPredicted RBP18.09■□□□□ 0.49
LRP8-211ENST00000496580 SYNMO15061 1565 aa18.07■□□□□ 0.48
LRP8-211ENST00000496580 ZC3H13Q5T200 1668 aaKnown RBP18.06■□□□□ 0.48
LRP8-211ENST00000496580 ABCC3O15438 1527 aa18.03■□□□□ 0.48
LRP8-211ENST00000496580 NCOA2Q15596 1464 aa18.03■□□□□ 0.48
LRP8-211ENST00000496580 RGS17Q9UGC6 210 aaPredicted RBP18.02■□□□□ 0.48
LRP8-211ENST00000496580 ERVK-7P63135 1459 aa18.01■□□□□ 0.47
LRP8-211ENST00000496580 ARHGEF5Q12774 1597 aa18.01■□□□□ 0.47
LRP8-211ENST00000496580 UBR1Q8IWV7 1749 aa18.01■□□□□ 0.47
LRP8-211ENST00000496580 XIRP1Q702N8 1843 aaKnown RBP18■□□□□ 0.47
LRP8-211ENST00000496580 MROH1Q8NDA8 1641 aa17.99■□□□□ 0.47
LRP8-211ENST00000496580 CEP152O94986 1710 aa17.99■□□□□ 0.47
LRP8-211ENST00000496580 SCAF11Q99590 1463 aaKnown RBP17.96■□□□□ 0.47
LRP8-211ENST00000496580 CFAP65Q6ZU64 1925 aaKnown RBP17.96■□□□□ 0.47
LRP8-211ENST00000496580 RSPH4AQ5TD94 716 aa17.95■□□□□ 0.46
LRP8-211ENST00000496580 MAST1Q9Y2H9 1570 aa17.95■□□□□ 0.46
LRP8-211ENST00000496580 EIF2AK4Q9P2K8 1649 aaKnown RBP17.94■□□□□ 0.46
LRP8-211ENST00000496580 TSPY4P0CV99 314 aa17.93■□□□□ 0.46
LRP8-211ENST00000496580 TSPY10P0CW01 314 aa17.93■□□□□ 0.46
LRP8-211ENST00000496580 LTKP29376 864 aa17.93■□□□□ 0.46
LRP8-211ENST00000496580 ARHGAP23Q9P227 1491 aa17.92■□□□□ 0.46
LRP8-211ENST00000496580 SLIT1O75093 1534 aa17.92■□□□□ 0.46
LRP8-211ENST00000496580 POTEAQ6S8J7 498 aa17.89■□□□□ 0.45
LRP8-211ENST00000496580 TXNDC2Q86VQ3 553 aa17.88■□□□□ 0.45
LRP8-211ENST00000496580 PIK3C2BO00750 1634 aa17.87■□□□□ 0.45
LRP8-211ENST00000496580 SETD1AO15047 1707 aaKnown RBP17.86■□□□□ 0.45
LRP8-211ENST00000496580 FAM135BQ49AJ0 1406 aa17.86■□□□□ 0.45
LRP8-211ENST00000496580 ROBO1Q9Y6N7 1651 aa17.86■□□□□ 0.45
LRP8-211ENST00000496580 PRDM15P57071 1507 aaPredicted RBP17.84■□□□□ 0.45
LRP8-211ENST00000496580 MAP3K1Q13233 1512 aa17.84■□□□□ 0.45
LRP8-211ENST00000496580 DUOX2Q9NRD8 1548 aa17.83■□□□□ 0.45
LRP8-211ENST00000496580 LRRC9Q6ZRR7 1453 aa17.83■□□□□ 0.45
LRP8-211ENST00000496580 TMEM94Q12767 1356 aa17.83■□□□□ 0.45
LRP8-211ENST00000496580 RBM33Q96EV2 1170 aaKnown RBP17.82■□□□□ 0.44
LRP8-211ENST00000496580 ARHGAP31Q2M1Z3 1444 aa17.81■□□□□ 0.44
LRP8-211ENST00000496580 TMEM2Q9UHN6 1383 aa17.8■□□□□ 0.44
LRP8-211ENST00000496580 EID1Q9Y6B2 187 aa17.8■□□□□ 0.44
LRP8-211ENST00000496580 KIF15Q9NS87 1388 aa17.78■□□□□ 0.44
LRP8-211ENST00000496580 EFCAB6Q5THR3 1501 aa17.77■□□□□ 0.44
LRP8-211ENST00000496580 CROCC2H7BZ55 1655 aa17.77■□□□□ 0.44
LRP8-211ENST00000496580 TET3O43151 1660 aa17.77■□□□□ 0.44
LRP8-211ENST00000496580 MYOM3Q5VTT5 1437 aa17.76■□□□□ 0.43
LRP8-211ENST00000496580 KANK4Q5T7N3 995 aaPredicted RBP17.76■□□□□ 0.43
LRP8-211ENST00000496580 PHLPP1O60346 1717 aa17.75■□□□□ 0.43
LRP8-211ENST00000496580 NWD1Q149M9 1564 aa17.75■□□□□ 0.43
LRP8-211ENST00000496580 ERBINQ96RT1 1412 aa17.75■□□□□ 0.43
LRP8-211ENST00000496580 KCNA6P17658 529 aa17.75■□□□□ 0.43
LRP8-211ENST00000496580 SLC26A8Q96RN1 970 aa17.75■□□□□ 0.43
LRP8-211ENST00000496580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.438e-10■■■□□ 17.1
LRP8-211ENST00000496580 KDM5AP29375 1690 aaKnown RBP17.74■□□□□ 0.43
LRP8-211ENST00000496580 PROSER2Q86WR7 435 aaPredicted RBP17.74■□□□□ 0.43
LRP8-211ENST00000496580 STAG3Q9UJ98 1225 aa17.74■□□□□ 0.43
LRP8-211ENST00000496580 RRP7BPQ9NSQ0 103 aa17.73■□□□□ 0.43
LRP8-211ENST00000496580 ABCC5O15440 1437 aa17.72■□□□□ 0.43
LRP8-211ENST00000496580 VPS8Q8N3P4 1428 aa17.72■□□□□ 0.43
LRP8-211ENST00000496580 NKTRP30414 1462 aaKnown RBP17.72■□□□□ 0.43
LRP8-211ENST00000496580 IDI1Q13907 227 aa17.72■□□□□ 0.43
LRP8-211ENST00000496580 ADGRB3O60242 1522 aa17.71■□□□□ 0.43
LRP8-211ENST00000496580 COL16A1Q07092 1604 aaPredicted RBP17.69■□□□□ 0.42
LRP8-211ENST00000496580 LMTK2Q8IWU2 1503 aa17.69■□□□□ 0.42
LRP8-211ENST00000496580 LRP6O75581 1613 aa17.69■□□□□ 0.42
LRP8-211ENST00000496580 JCADQ9P266 1359 aa17.68■□□□□ 0.42
LRP8-211ENST00000496580 PTPN23Q9H3S7 1636 aa17.68■□□□□ 0.42
LRP8-211ENST00000496580 MSH6P52701 1360 aa17.67■□□□□ 0.42
LRP8-211ENST00000496580 KANK1Q14678 1352 aa17.67■□□□□ 0.42
LRP8-211ENST00000496580 NOS1P29475 1434 aa17.66■□□□□ 0.42
LRP8-211ENST00000496580 DAPK1P53355 1430 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms