RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 MROH1Q8NDA8 1641 aa24.93■■□□□ 1.58
DNMT3A-215ENST00000496570 ADGRL2O95490 1459 aa24.91■■□□□ 1.58
DNMT3A-215ENST00000496570 PTPRKQ15262 1439 aa24.91■■□□□ 1.58
DNMT3A-215ENST00000496570 FAM135AQ9P2D6 1515 aa24.91■■□□□ 1.58
DNMT3A-215ENST00000496570 NCOA1Q15788 1441 aa24.9■■□□□ 1.58
DNMT3A-215ENST00000496570 RRP7BPQ9NSQ0 103 aa24.9■■□□□ 1.58
DNMT3A-215ENST00000496570 CHIC2Q9UKJ5 165 aa24.9■■□□□ 1.58
DNMT3A-215ENST00000496570 KDM5DQ9BY66 1539 aa24.89■■□□□ 1.57
DNMT3A-215ENST00000496570 NPATQ14207 1427 aa24.87■■□□□ 1.57
DNMT3A-215ENST00000496570 ERBINQ96RT1 1412 aa24.87■■□□□ 1.57
DNMT3A-215ENST00000496570 ANKRD30AQ9BXX3 1397 aa24.87■■□□□ 1.57
DNMT3A-215ENST00000496570 SETD1BQ9UPS6 1966 aaKnown RBP24.87■■□□□ 1.57
DNMT3A-215ENST00000496570 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.85■■□□□ 1.57
DNMT3A-215ENST00000496570 HSPA2P54652 639 aa24.85■■□□□ 1.57
DNMT3A-215ENST00000496570 ABCC3O15438 1527 aa24.82■■□□□ 1.56
DNMT3A-215ENST00000496570 UHRF1BP1Q6BDS2 1440 aa24.82■■□□□ 1.56
DNMT3A-215ENST00000496570 RRBP1Q9P2E9 1410 aaKnown RBP24.82■■□□□ 1.56
DNMT3A-215ENST00000496570 DEPDC5O75140 1603 aa24.82■■□□□ 1.56
DNMT3A-215ENST00000496570 PRDM15P57071 1507 aaPredicted RBP24.81■■□□□ 1.56
DNMT3A-215ENST00000496570 WASHC2CQ9Y4E1 1318 aa24.81■■□□□ 1.56
DNMT3A-215ENST00000496570 ZC3H13Q5T200 1668 aaKnown RBP24.8■■□□□ 1.56
DNMT3A-215ENST00000496570 PZPP20742 1482 aa24.79■■□□□ 1.56
DNMT3A-215ENST00000496570 CEP152O94986 1710 aa24.78■■□□□ 1.56
DNMT3A-215ENST00000496570 MYO3AQ8NEV4 1616 aa24.76■■□□□ 1.55
DNMT3A-215ENST00000496570 FBXO31Q5XUX0 539 aaPredicted RBP24.75■■□□□ 1.55
DNMT3A-215ENST00000496570 ROCK1Q13464 1354 aa24.75■■□□□ 1.55
DNMT3A-215ENST00000496570 VWDEQ8N2E2 1590 aa24.74■■□□□ 1.55
DNMT3A-215ENST00000496570 ZNF142P52746 1687 aaPredicted RBP24.73■■□□□ 1.55
DNMT3A-215ENST00000496570 CAMSAP1Q5T5Y3 1602 aa24.73■■□□□ 1.55
DNMT3A-215ENST00000496570 ANKRD50Q9ULJ7 1429 aa24.72■■□□□ 1.55
DNMT3A-215ENST00000496570 STRCQ7RTU9 1775 aa24.71■■□□□ 1.55
DNMT3A-215ENST00000496570 CEP170BQ9Y4F5 1589 aaPredicted RBP24.69■■□□□ 1.54
DNMT3A-215ENST00000496570 SPATA31D1Q6ZQQ2 1576 aa24.68■■□□□ 1.54
DNMT3A-215ENST00000496570 LMTK2Q8IWU2 1503 aa24.68■■□□□ 1.54
DNMT3A-215ENST00000496570 ITGAEP38570 1179 aa24.68■■□□□ 1.54
DNMT3A-215ENST00000496570 TNRQ92752 1358 aa24.67■■□□□ 1.54
DNMT3A-215ENST00000496570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.66■■□□□ 1.543e-8■■□□□ 12
DNMT3A-215ENST00000496570 ARHGAP31Q2M1Z3 1444 aa24.66■■□□□ 1.54
DNMT3A-215ENST00000496570 ERVK-7P63135 1459 aa24.65■■□□□ 1.54
DNMT3A-215ENST00000496570 A2ML1A8K2U0 1454 aa24.64■■□□□ 1.54
DNMT3A-215ENST00000496570 UNC13BO14795 1591 aa24.63■■□□□ 1.53
DNMT3A-215ENST00000496570 KANK1Q14678 1352 aa24.62■■□□□ 1.53
DNMT3A-215ENST00000496570 EFCAB6Q5THR3 1501 aa24.59■■□□□ 1.53
DNMT3A-215ENST00000496570 NLRP1Q9C000 1473 aa24.58■■□□□ 1.53
DNMT3A-215ENST00000496570 CFAP65Q6ZU64 1925 aaKnown RBP24.58■■□□□ 1.53
DNMT3A-215ENST00000496570 PLA2R1Q13018 1463 aa24.57■■□□□ 1.52
DNMT3A-215ENST00000496570 NAIPQ13075 1403 aa24.53■■□□□ 1.52
DNMT3A-215ENST00000496570 TET3O43151 1660 aa24.53■■□□□ 1.52
DNMT3A-215ENST00000496570 IQGAP3Q86VI3 1631 aa24.53■■□□□ 1.52
DNMT3A-215ENST00000496570 GCC2Q8IWJ2 1684 aa24.53■■□□□ 1.52
DNMT3A-215ENST00000496570 PTPRTO14522 1441 aa24.52■■□□□ 1.52
DNMT3A-215ENST00000496570 SYNMO15061 1565 aa24.51■■□□□ 1.51
DNMT3A-215ENST00000496570 UGGT1Q9NYU2 1555 aa24.51■■□□□ 1.51
DNMT3A-215ENST00000496570 NOS1P29475 1434 aa24.51■■□□□ 1.51
DNMT3A-215ENST00000496570 NCKAP5LQ9HCH0 1330 aa24.5■■□□□ 1.51
DNMT3A-215ENST00000496570 HFM1A2PYH4 1435 aa24.48■■□□□ 1.51
DNMT3A-215ENST00000496570 RPRD2Q5VT52 1461 aaKnown RBP24.48■■□□□ 1.51
DNMT3A-215ENST00000496570 UBR1Q8IWV7 1749 aa24.48■■□□□ 1.51
DNMT3A-215ENST00000496570 DMRT2Q9Y5R5 561 aa24.47■■□□□ 1.51
DNMT3A-215ENST00000496570 E9PCH4 1651 aa24.46■■□□□ 1.51
DNMT3A-215ENST00000496570 NEURL4Q96JN8 1562 aa24.46■■□□□ 1.51
DNMT3A-215ENST00000496570 NUP155O75694 1391 aa24.45■■□□□ 1.5
DNMT3A-215ENST00000496570 PKD2Q13563 968 aa24.45■■□□□ 1.5
DNMT3A-215ENST00000496570 PIK3C2BO00750 1634 aa24.45■■□□□ 1.5
DNMT3A-215ENST00000496570 POLR1AO95602 1720 aaPredicted RBP24.44■■□□□ 1.5
DNMT3A-215ENST00000496570 THEMISQ8N1K5 641 aaPredicted RBP24.43■■□□□ 1.5
DNMT3A-215ENST00000496570 IDI1Q13907 227 aa24.4■■□□□ 1.5
DNMT3A-215ENST00000496570 KDM5AP29375 1690 aaKnown RBP24.38■■□□□ 1.49
DNMT3A-215ENST00000496570 ARHGAP23Q9P227 1491 aa24.38■■□□□ 1.49
DNMT3A-215ENST00000496570 SLIT1O75093 1534 aa24.37■■□□□ 1.49
DNMT3A-215ENST00000496570 MED14O60244 1454 aa24.37■■□□□ 1.49
DNMT3A-215ENST00000496570 LTBP4Q8N2S1 1624 aa24.35■■□□□ 1.49
DNMT3A-215ENST00000496570 ANKLE2Q86XL3 938 aa24.35■■□□□ 1.49
DNMT3A-215ENST00000496570 ADGRB3O60242 1522 aa24.34■■□□□ 1.49
DNMT3A-215ENST00000496570 SLC52A1Q9NWF4 448 aa24.33■■□□□ 1.49
DNMT3A-215ENST00000496570 TMEM2Q9UHN6 1383 aa24.3■■□□□ 1.48
DNMT3A-215ENST00000496570 NPHP4O75161 1426 aaPredicted RBP24.3■■□□□ 1.48
DNMT3A-215ENST00000496570 LTKP29376 864 aa24.3■■□□□ 1.48
DNMT3A-215ENST00000496570 CERKQ8TCT0 537 aa24.29■■□□□ 1.48
DNMT3A-215ENST00000496570 SCAF11Q99590 1463 aaKnown RBP24.29■■□□□ 1.48
DNMT3A-215ENST00000496570 IQGAP1P46940 1657 aa24.29■■□□□ 1.48
DNMT3A-215ENST00000496570 ZNF335Q9H4Z2 1342 aaPredicted RBP24.29■■□□□ 1.48
DNMT3A-215ENST00000496570 TMEM131LA2VDJ0 1609 aa24.28■■□□□ 1.48
DNMT3A-215ENST00000496570 MYO5BQ9ULV0 1848 aa24.28■■□□□ 1.48
DNMT3A-215ENST00000496570 SPHKAPQ2M3C7 1700 aa24.27■■□□□ 1.48
DNMT3A-215ENST00000496570 ILDR1Q86SU0 546 aaPredicted RBP24.26■■□□□ 1.47
DNMT3A-215ENST00000496570 STAG3Q9UJ98 1225 aa24.24■■□□□ 1.47
DNMT3A-215ENST00000496570 TXNDC2Q86VQ3 553 aa24.23■■□□□ 1.47
DNMT3A-215ENST00000496570 TRIM52Q96A61 297 aa24.23■■□□□ 1.47
DNMT3A-215ENST00000496570 ZFYVE9O95405 1425 aa24.22■■□□□ 1.47
DNMT3A-215ENST00000496570 SETD5Q9C0A6 1442 aa24.21■■□□□ 1.47
DNMT3A-215ENST00000496570 TRPM2O94759 1503 aa24.2■■□□□ 1.47
DNMT3A-215ENST00000496570 FBXO41Q8TF61 875 aa24.19■■□□□ 1.46
DNMT3A-215ENST00000496570 CLTCL1P53675 1640 aa24.18■■□□□ 1.46
DNMT3A-215ENST00000496570 EID1Q9Y6B2 187 aa24.17■■□□□ 1.46
DNMT3A-215ENST00000496570 STRCP1A6NGW2 1772 aa24.16■■□□□ 1.46
DNMT3A-215ENST00000496570 SLC4A1APQ9BWU0 796 aaKnown RBP24.16■■□□□ 1.46
DNMT3A-215ENST00000496570 RIMS2Q9UQ26 1411 aa24.15■■□□□ 1.46
DNMT3A-215ENST00000496570 RAB3GAP2Q9H2M9 1393 aa24.14■■□□□ 1.45
DNMT3A-215ENST00000496570 IQSEC2Q5JU85 1478 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms