RNA–Protein interactions for RNA: ENST00000496216.5

STX1A-213, Transcript of syntaxin 1A, humanhuman

TSL 5

Gene STX1A, Length 714 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-213ENST00000496216 DNMT1P26358 1616 aaKnown RBP24.24■■□□□ 1.47
STX1A-213ENST00000496216 MTUS2Q5JR59 1369 aa24.24■■□□□ 1.47
STX1A-213ENST00000496216 PHF23Q9BUL5 403 aaPredicted RBP24.23■■□□□ 1.47
STX1A-213ENST00000496216 MED1Q15648 1581 aaPredicted RBP24.22■■□□□ 1.47
STX1A-213ENST00000496216 FBXO31Q5XUX0 539 aaPredicted RBP24.21■■□□□ 1.47
STX1A-213ENST00000496216 ADGBQ8N7X0 1667 aa24.21■■□□□ 1.47
STX1A-213ENST00000496216 KIF3BO15066 747 aa24.2■■□□□ 1.46
STX1A-213ENST00000496216 WASHC2CQ9Y4E1 1318 aa24.19■■□□□ 1.46
STX1A-213ENST00000496216 RSPH4AQ5TD94 716 aa24.19■■□□□ 1.46
STX1A-213ENST00000496216 ZNF644Q9H582 1327 aaPredicted RBP24.18■■□□□ 1.46
STX1A-213ENST00000496216 MBD5Q9P267 1494 aa24.18■■□□□ 1.46
STX1A-213ENST00000496216 FAM135AQ9P2D6 1515 aa24.17■■□□□ 1.46
STX1A-213ENST00000496216 PZPP20742 1482 aa24.16■■□□□ 1.46
STX1A-213ENST00000496216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.16■■□□□ 1.467e-6■■■□□ 16.5
STX1A-213ENST00000496216 MIA2Q96PC5 1412 aa24.15■■□□□ 1.46
STX1A-213ENST00000496216 NLRP1Q9C000 1473 aa24.13■■□□□ 1.45
STX1A-213ENST00000496216 NEURL4Q96JN8 1562 aa24.13■■□□□ 1.45
STX1A-213ENST00000496216 MED14O60244 1454 aa24.12■■□□□ 1.45
STX1A-213ENST00000496216 NPHP4O75161 1426 aaPredicted RBP24.11■■□□□ 1.45
STX1A-213ENST00000496216 KDM5DQ9BY66 1539 aa24.11■■□□□ 1.45
STX1A-213ENST00000496216 POLR1AO95602 1720 aaPredicted RBP24.1■■□□□ 1.45
STX1A-213ENST00000496216 VWDEQ8N2E2 1590 aa24.08■■□□□ 1.44
STX1A-213ENST00000496216 UGGT1Q9NYU2 1555 aa24.08■■□□□ 1.44
STX1A-213ENST00000496216 CEP162Q5TB80 1403 aa24.06■■□□□ 1.44
STX1A-213ENST00000496216 TSPY4P0CV99 314 aa24.05■■□□□ 1.44
STX1A-213ENST00000496216 TSPY10P0CW01 314 aa24.05■■□□□ 1.44
STX1A-213ENST00000496216 CCDC141Q6ZP82 1450 aa24.05■■□□□ 1.44
STX1A-213ENST00000496216 TIAM1Q13009 1591 aa24.04■■□□□ 1.44
STX1A-213ENST00000496216 DEPDC5O75140 1603 aa24.04■■□□□ 1.44
STX1A-213ENST00000496216 EHBP1L1Q8N3D4 1523 aa24.03■■□□□ 1.44
STX1A-213ENST00000496216 LRRC7Q96NW7 1537 aa23.99■■□□□ 1.43
STX1A-213ENST00000496216 ALKQ9UM73 1620 aa23.98■■□□□ 1.43
STX1A-213ENST00000496216 SENP3Q9H4L4 574 aaPredicted RBP23.95■■□□□ 1.42
STX1A-213ENST00000496216 IQGAP1P46940 1657 aa23.94■■□□□ 1.42
STX1A-213ENST00000496216 CAMSAP2Q08AD1 1489 aa23.94■■□□□ 1.42
STX1A-213ENST00000496216 RNF17Q9BXT8 1623 aaKnown RBP23.91■■□□□ 1.42
STX1A-213ENST00000496216 NCOA2Q15596 1464 aa23.9■■□□□ 1.42
STX1A-213ENST00000496216 SYNMO15061 1565 aa23.9■■□□□ 1.42
STX1A-213ENST00000496216 RGS17Q9UGC6 210 aaPredicted RBP23.89■■□□□ 1.41
STX1A-213ENST00000496216 ARHGEF5Q12774 1597 aa23.87■■□□□ 1.41
STX1A-213ENST00000496216 TXNDC2Q86VQ3 553 aa23.87■■□□□ 1.41
STX1A-213ENST00000496216 EID1Q9Y6B2 187 aa23.87■■□□□ 1.41
STX1A-213ENST00000496216 ERVK-7P63135 1459 aa23.87■■□□□ 1.41
STX1A-213ENST00000496216 SCAF11Q99590 1463 aaKnown RBP23.86■■□□□ 1.41
STX1A-213ENST00000496216 ABCC3O15438 1527 aa23.85■■□□□ 1.41
STX1A-213ENST00000496216 LTKP29376 864 aa23.83■■□□□ 1.41
STX1A-213ENST00000496216 FAM135BQ49AJ0 1406 aa23.83■■□□□ 1.4
STX1A-213ENST00000496216 ZC3H13Q5T200 1668 aaKnown RBP23.82■■□□□ 1.4
STX1A-213ENST00000496216 STRCP1A6NGW2 1772 aa23.8■■□□□ 1.4
STX1A-213ENST00000496216 ARHGAP23Q9P227 1491 aa23.78■■□□□ 1.4
STX1A-213ENST00000496216 SLIT1O75093 1534 aa23.77■■□□□ 1.4
STX1A-213ENST00000496216 ARHGAP31Q2M1Z3 1444 aa23.76■■□□□ 1.39
STX1A-213ENST00000496216 MAST1Q9Y2H9 1570 aa23.75■■□□□ 1.39
STX1A-213ENST00000496216 EIF2AK4Q9P2K8 1649 aaKnown RBP23.75■■□□□ 1.39
STX1A-213ENST00000496216 STAG3Q9UJ98 1225 aa23.75■■□□□ 1.39
STX1A-213ENST00000496216 POTEAQ6S8J7 498 aa23.74■■□□□ 1.39
STX1A-213ENST00000496216 KCNA6P17658 529 aa23.73■■□□□ 1.39
STX1A-213ENST00000496216 UBR1Q8IWV7 1749 aa23.73■■□□□ 1.39
STX1A-213ENST00000496216 TMEM2Q9UHN6 1383 aa23.71■■□□□ 1.39
STX1A-213ENST00000496216 TMEM94Q12767 1356 aa23.7■■□□□ 1.38
STX1A-213ENST00000496216 DUOX2Q9NRD8 1548 aa23.69■■□□□ 1.38
STX1A-213ENST00000496216 PROSER2Q86WR7 435 aaPredicted RBP23.69■■□□□ 1.38
STX1A-213ENST00000496216 MYOM3Q5VTT5 1437 aa23.67■■□□□ 1.38
STX1A-213ENST00000496216 MROH1Q8NDA8 1641 aa23.67■■□□□ 1.38
STX1A-213ENST00000496216 LRRC9Q6ZRR7 1453 aa23.66■■□□□ 1.38
STX1A-213ENST00000496216 KANK1Q14678 1352 aa23.65■■□□□ 1.38
STX1A-213ENST00000496216 ERBINQ96RT1 1412 aa23.63■■□□□ 1.37
STX1A-213ENST00000496216 KIF15Q9NS87 1388 aa23.63■■□□□ 1.37
STX1A-213ENST00000496216 IDI1Q13907 227 aa23.62■■□□□ 1.37
STX1A-213ENST00000496216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.62■■□□□ 1.37
STX1A-213ENST00000496216 SLC26A8Q96RN1 970 aa23.61■■□□□ 1.37
STX1A-213ENST00000496216 RRP7BPQ9NSQ0 103 aa23.6■■□□□ 1.37
STX1A-213ENST00000496216 SLAIN2Q9P270 581 aa23.6■■□□□ 1.37
STX1A-213ENST00000496216 PRDM15P57071 1507 aaPredicted RBP23.59■■□□□ 1.37
STX1A-213ENST00000496216 CEP152O94986 1710 aa23.59■■□□□ 1.37
STX1A-213ENST00000496216 MSH6P52701 1360 aa23.59■■□□□ 1.37
STX1A-213ENST00000496216 XIRP1Q702N8 1843 aaKnown RBP23.59■■□□□ 1.37
STX1A-213ENST00000496216 JCADQ9P266 1359 aa23.58■■□□□ 1.37
STX1A-213ENST00000496216 EFCAB6Q5THR3 1501 aa23.58■■□□□ 1.36
STX1A-213ENST00000496216 BCANQ96GW7 911 aa23.56■■□□□ 1.36
STX1A-213ENST00000496216 SLC52A1Q9NWF4 448 aa23.56■■□□□ 1.36
STX1A-213ENST00000496216 NKTRP30414 1462 aaKnown RBP23.56■■□□□ 1.36
STX1A-213ENST00000496216 ROBO1Q9Y6N7 1651 aa23.55■■□□□ 1.36
STX1A-213ENST00000496216 HDGFP51858 240 aaKnown RBP23.55■■□□□ 1.36
STX1A-213ENST00000496216 KANK4Q5T7N3 995 aaPredicted RBP23.55■■□□□ 1.36
STX1A-213ENST00000496216 PIK3C2BO00750 1634 aa23.55■■□□□ 1.36
STX1A-213ENST00000496216 MAP3K1Q13233 1512 aa23.54■■□□□ 1.36
STX1A-213ENST00000496216 VPS8Q8N3P4 1428 aa23.54■■□□□ 1.36
STX1A-213ENST00000496216 RBM33Q96EV2 1170 aaKnown RBP23.54■■□□□ 1.36
STX1A-213ENST00000496216 TET3O43151 1660 aa23.54■■□□□ 1.36
STX1A-213ENST00000496216 KDM5AP29375 1690 aaKnown RBP23.54■■□□□ 1.36
STX1A-213ENST00000496216 CFAP65Q6ZU64 1925 aaKnown RBP23.53■■□□□ 1.36
STX1A-213ENST00000496216 ZNF772Q68DY9 489 aaPredicted RBP23.51■■□□□ 1.35
STX1A-213ENST00000496216 ABCC5O15440 1437 aa23.5■■□□□ 1.35
STX1A-213ENST00000496216 LMTK2Q8IWU2 1503 aa23.49■■□□□ 1.35
STX1A-213ENST00000496216 SPATA31A6Q5VVP1 1343 aa23.49■■□□□ 1.35
STX1A-213ENST00000496216 NCOA3Q9Y6Q9 1424 aa23.47■■□□□ 1.35
STX1A-213ENST00000496216 NOS1P29475 1434 aa23.46■■□□□ 1.35
STX1A-213ENST00000496216 NWD1Q149M9 1564 aa23.46■■□□□ 1.35
STX1A-213ENST00000496216 ANKRD30AQ9BXX3 1397 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms