RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 BCORL1Q5H9F3 1711 aa32.35■■■□□ 2.77
ECHDC3-205ENST00000496136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.33■■■□□ 2.77
ECHDC3-205ENST00000496136 GGT6Q6P531 493 aa32.32■■■□□ 2.77
ECHDC3-205ENST00000496136 NUP155O75694 1391 aa32.3■■■□□ 2.76
ECHDC3-205ENST00000496136 ARID4BQ4LE39 1312 aaPredicted RBP32.3■■■□□ 2.76
ECHDC3-205ENST00000496136 DEPDC5O75140 1603 aa32.29■■■□□ 2.76
ECHDC3-205ENST00000496136 UNC13BO14795 1591 aa32.29■■■□□ 2.76
ECHDC3-205ENST00000496136 RNF17Q9BXT8 1623 aaKnown RBP32.28■■■□□ 2.76
ECHDC3-205ENST00000496136 MROH1Q8NDA8 1641 aa32.25■■■□□ 2.75
ECHDC3-205ENST00000496136 MLECQ14165 292 aa32.23■■■□□ 2.75
ECHDC3-205ENST00000496136 PRDM15P57071 1507 aaPredicted RBP32.23■■■□□ 2.75
ECHDC3-205ENST00000496136 MPHOSPH9Q99550 1183 aa32.21■■■□□ 2.75
ECHDC3-205ENST00000496136 KDM5DQ9BY66 1539 aa32.21■■■□□ 2.75
ECHDC3-205ENST00000496136 KANK1Q14678 1352 aa32.2■■■□□ 2.75
ECHDC3-205ENST00000496136 SLC4A1APQ9BWU0 796 aaKnown RBP32.19■■■□□ 2.74
ECHDC3-205ENST00000496136 PZPP20742 1482 aa32.19■■■□□ 2.74
ECHDC3-205ENST00000496136 VWDEQ8N2E2 1590 aa32.19■■■□□ 2.74
ECHDC3-205ENST00000496136 PPP6R1Q9UPN7 881 aa32.17■■■□□ 2.74
ECHDC3-205ENST00000496136 FAM135AQ9P2D6 1515 aa32.17■■■□□ 2.74
ECHDC3-205ENST00000496136 IQGAP3Q86VI3 1631 aa32.17■■■□□ 2.74
ECHDC3-205ENST00000496136 DHX57Q6P158 1386 aaKnown RBP32.16■■■□□ 2.74
ECHDC3-205ENST00000496136 WASHC2CQ9Y4E1 1318 aa32.16■■■□□ 2.74
ECHDC3-205ENST00000496136 PKD2Q13563 968 aa32.09■■■□□ 2.73
ECHDC3-205ENST00000496136 CEP152O94986 1710 aa32.08■■■□□ 2.73
ECHDC3-205ENST00000496136 ABCC3O15438 1527 aa32.08■■■□□ 2.73
ECHDC3-205ENST00000496136 LMTK2Q8IWU2 1503 aa32.08■■■□□ 2.73
ECHDC3-205ENST00000496136 FOXD1Q16676 465 aa32.05■■■□□ 2.72
ECHDC3-205ENST00000496136 CCER1Q8TC90 406 aaPredicted RBP32.05■■■□□ 2.72
ECHDC3-205ENST00000496136 ESF1Q9H501 851 aaKnown RBP32.04■■■□□ 2.72
ECHDC3-205ENST00000496136 TET3O43151 1660 aa32.04■■■□□ 2.72
ECHDC3-205ENST00000496136 ZC3H13Q5T200 1668 aaKnown RBP32.04■■■□□ 2.72
ECHDC3-205ENST00000496136 CLTCQ00610 1675 aaKnown RBP32■■■□□ 2.71
ECHDC3-205ENST00000496136 EFCAB6Q5THR3 1501 aa31.98■■■□□ 2.71
ECHDC3-205ENST00000496136 E9PCH4 1651 aa31.98■■■□□ 2.71
ECHDC3-205ENST00000496136 CAMSAP1Q5T5Y3 1602 aa31.97■■■□□ 2.71
ECHDC3-205ENST00000496136 CNTLNQ9NXG0 1405 aa31.96■■■□□ 2.71
ECHDC3-205ENST00000496136 NPATQ14207 1427 aa31.95■■■□□ 2.7
ECHDC3-205ENST00000496136 ZMYM3Q14202 1370 aa31.94■■■□□ 2.7
ECHDC3-205ENST00000496136 ADAMTSL3P82987 1691 aa31.94■■■□□ 2.7
ECHDC3-205ENST00000496136 ARHGAP31Q2M1Z3 1444 aa31.94■■■□□ 2.7
ECHDC3-205ENST00000496136 FER1L4A9Z1Z3 1794 aa31.94■■■□□ 2.7
ECHDC3-205ENST00000496136 CFAP65Q6ZU64 1925 aaKnown RBP31.93■■■□□ 2.7
ECHDC3-205ENST00000496136 RPRD2Q5VT52 1461 aaKnown RBP31.91■■■□□ 2.7
ECHDC3-205ENST00000496136 ANKRD30BQ9BXX2 1392 aa31.9■■■□□ 2.7
ECHDC3-205ENST00000496136 MADDQ8WXG6 1647 aa31.89■■■□□ 2.7
ECHDC3-205ENST00000496136 CLSPNQ9HAW4 1339 aa31.89■■■□□ 2.69
ECHDC3-205ENST00000496136 MROH2AA6NES4 1674 aa31.87■■■□□ 2.69
ECHDC3-205ENST00000496136 FBXO31Q5XUX0 539 aaPredicted RBP31.86■■■□□ 2.69
ECHDC3-205ENST00000496136 PLA2R1Q13018 1463 aa31.85■■■□□ 2.69
ECHDC3-205ENST00000496136 PTPRTO14522 1441 aa31.84■■■□□ 2.69
ECHDC3-205ENST00000496136 CEBPAP49715 358 aaPredicted RBP31.83■■■□□ 2.69
ECHDC3-205ENST00000496136 RIMS1Q86UR5 1692 aaKnown RBP31.82■■■□□ 2.68
ECHDC3-205ENST00000496136 SIN3AQ96ST3 1273 aa31.81■■■□□ 2.68
ECHDC3-205ENST00000496136 SPHKAPQ2M3C7 1700 aa31.8■■■□□ 2.68
ECHDC3-205ENST00000496136 NOS1P29475 1434 aa31.79■■■□□ 2.68
ECHDC3-205ENST00000496136 C3P01024 1663 aa31.78■■■□□ 2.68
ECHDC3-205ENST00000496136 PREX1Q8TCU6 1659 aa31.78■■■□□ 2.68
ECHDC3-205ENST00000496136 KDM4FA0A1W2PPD8 638 aa31.76■■■□□ 2.68
ECHDC3-205ENST00000496136 ERVK-7P63135 1459 aa31.76■■■□□ 2.67
ECHDC3-205ENST00000496136 TRPM2O94759 1503 aa31.75■■■□□ 2.67
ECHDC3-205ENST00000496136 NEUROD1Q13562 356 aa31.74■■■□□ 2.67
ECHDC3-205ENST00000496136 PLPPR3Q6T4P5 718 aa31.74■■■□□ 2.67
ECHDC3-205ENST00000496136 SPATA31D1Q6ZQQ2 1576 aa31.73■■■□□ 2.67
ECHDC3-205ENST00000496136 CCDC144AA2RUR9 1427 aa31.72■■■□□ 2.67
ECHDC3-205ENST00000496136 SYNMO15061 1565 aa31.71■■■□□ 2.67
ECHDC3-205ENST00000496136 PTPRMP28827 1452 aa31.7■■■□□ 2.66
ECHDC3-205ENST00000496136 UGGT1Q9NYU2 1555 aa31.68■■■□□ 2.66
ECHDC3-205ENST00000496136 SLC52A1Q9NWF4 448 aa31.68■■■□□ 2.66
ECHDC3-205ENST00000496136 IDI1Q13907 227 aa31.66■■■□□ 2.66
ECHDC3-205ENST00000496136 CLTCL1P53675 1640 aa31.66■■■□□ 2.66
ECHDC3-205ENST00000496136 TNRQ92752 1358 aa31.64■■■□□ 2.66
ECHDC3-205ENST00000496136 PIK3C2BO00750 1634 aa31.62■■■□□ 2.65
ECHDC3-205ENST00000496136 SETD1BQ9UPS6 1966 aaKnown RBP31.58■■■□□ 2.65
ECHDC3-205ENST00000496136 KIF1BO60333 1816 aa31.56■■■□□ 2.64
ECHDC3-205ENST00000496136 CHGAP10645 457 aaKnown RBP31.54■■■□□ 2.64
ECHDC3-205ENST00000496136 SPATA31E1Q6ZUB1 1445 aa31.54■■■□□ 2.64
ECHDC3-205ENST00000496136 RGL3Q3MIN7 710 aa31.53■■■□□ 2.64
ECHDC3-205ENST00000496136 TIMELESSQ9UNS1 1208 aa31.52■■■□□ 2.64
ECHDC3-205ENST00000496136 NLRP1Q9C000 1473 aa31.52■■■□□ 2.64
ECHDC3-205ENST00000496136 TONSLQ96HA7 1378 aa31.51■■■□□ 2.63
ECHDC3-205ENST00000496136 L3MBTL2Q969R5 705 aa31.49■■■□□ 2.63
ECHDC3-205ENST00000496136 STAG3Q9UJ98 1225 aa31.48■■■□□ 2.63
ECHDC3-205ENST00000496136 TMEM131LA2VDJ0 1609 aa31.47■■■□□ 2.63
ECHDC3-205ENST00000496136 NEURL4Q96JN8 1562 aa31.46■■■□□ 2.63
ECHDC3-205ENST00000496136 ADGRB3O60242 1522 aa31.46■■■□□ 2.63
ECHDC3-205ENST00000496136 MYO3AQ8NEV4 1616 aa31.45■■■□□ 2.62
ECHDC3-205ENST00000496136 MYO5BQ9ULV0 1848 aa31.44■■■□□ 2.62
ECHDC3-205ENST00000496136 ZEB1P37275 1124 aaPredicted RBP31.43■■■□□ 2.62
ECHDC3-205ENST00000496136 ZNF326Q5BKZ1 582 aaKnown RBP31.43■■■□□ 2.62
ECHDC3-205ENST00000496136 A2ML1A8K2U0 1454 aa31.42■■■□□ 2.62
ECHDC3-205ENST00000496136 DCAF11Q8TEB1 546 aa31.41■■■□□ 2.62
ECHDC3-205ENST00000496136 UBR1Q8IWV7 1749 aa31.4■■■□□ 2.62
ECHDC3-205ENST00000496136 KDM5AP29375 1690 aaKnown RBP31.4■■■□□ 2.62
ECHDC3-205ENST00000496136 CEP170BQ9Y4F5 1589 aaPredicted RBP31.37■■■□□ 2.61
ECHDC3-205ENST00000496136 KDM2AQ9Y2K7 1162 aa31.37■■■□□ 2.61
ECHDC3-205ENST00000496136 RPGRIP1LQ68CZ1 1315 aa31.37■■■□□ 2.61
ECHDC3-205ENST00000496136 UHRF1BP1Q6BDS2 1440 aa31.36■■■□□ 2.61
ECHDC3-205ENST00000496136 PPP1R15AO75807 674 aaPredicted RBP31.35■■■□□ 2.61
ECHDC3-205ENST00000496136 THEMISQ8N1K5 641 aaPredicted RBP31.35■■■□□ 2.61
ECHDC3-205ENST00000496136 ZNF142P52746 1687 aaPredicted RBP31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms