RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 EIF2AK4Q9P2K8 1649 aaKnown RBP24.1■■□□□ 1.45
CBX4-204ENST00000495122 DHX29Q7Z478 1369 aaKnown RBP24.09■■□□□ 1.45
CBX4-204ENST00000495122 CEP170BQ9Y4F5 1589 aaPredicted RBP24.08■■□□□ 1.45
CBX4-204ENST00000495122 MIA2Q96PC5 1412 aa24.08■■□□□ 1.44
CBX4-204ENST00000495122 TCOF1Q13428 1488 aaKnown RBP24.07■■□□□ 1.44
CBX4-204ENST00000495122 CAMSAP1Q5T5Y3 1602 aa24.07■■□□□ 1.44
CBX4-204ENST00000495122 KDM5DQ9BY66 1539 aa24.07■■□□□ 1.44
CBX4-204ENST00000495122 ZC3H13Q5T200 1668 aaKnown RBP24.07■■□□□ 1.44
CBX4-204ENST00000495122 PTPRKQ15262 1439 aa24.07■■□□□ 1.44
CBX4-204ENST00000495122 RSPH4AQ5TD94 716 aa24.06■■□□□ 1.44
CBX4-204ENST00000495122 PTPN23Q9H3S7 1636 aa24.05■■□□□ 1.44
CBX4-204ENST00000495122 POLR1AO95602 1720 aaPredicted RBP24.04■■□□□ 1.44
CBX4-204ENST00000495122 NCOA1Q15788 1441 aa24.04■■□□□ 1.44
CBX4-204ENST00000495122 GGT6Q6P531 493 aa24.04■■□□□ 1.44
CBX4-204ENST00000495122 SETD5Q9C0A6 1442 aa24.03■■□□□ 1.44
CBX4-204ENST00000495122 CEP152O94986 1710 aa24.03■■□□□ 1.44
CBX4-204ENST00000495122 PPP6R1Q9UPN7 881 aa24.02■■□□□ 1.44
CBX4-204ENST00000495122 PTPRTO14522 1441 aa24.01■■□□□ 1.43
CBX4-204ENST00000495122 DHX57Q6P158 1386 aaKnown RBP24.01■■□□□ 1.43
CBX4-204ENST00000495122 MROH1Q8NDA8 1641 aa24■■□□□ 1.43
CBX4-204ENST00000495122 FAM50AQ14320 339 aaKnown RBP24■■□□□ 1.43
CBX4-204ENST00000495122 DNMT1P26358 1616 aaKnown RBP23.99■■□□□ 1.43
CBX4-204ENST00000495122 CFAP65Q6ZU64 1925 aaKnown RBP23.98■■□□□ 1.43
CBX4-204ENST00000495122 PZPP20742 1482 aa23.97■■□□□ 1.43
CBX4-204ENST00000495122 DMRT2Q9Y5R5 561 aa23.97■■□□□ 1.43
CBX4-204ENST00000495122 PLA2R1Q13018 1463 aa23.96■■□□□ 1.43
CBX4-204ENST00000495122 SHANK2Q9UPX8 1470 aa23.95■■□□□ 1.42
CBX4-204ENST00000495122 RAB3GAP2Q9H2M9 1393 aa23.95■■□□□ 1.42
CBX4-204ENST00000495122 KIF3BO15066 747 aa23.95■■□□□ 1.42
CBX4-204ENST00000495122 TSPY4P0CV99 314 aa23.94■■□□□ 1.42
CBX4-204ENST00000495122 TSPY10P0CW01 314 aa23.94■■□□□ 1.42
CBX4-204ENST00000495122 LTBP4Q8N2S1 1624 aa23.94■■□□□ 1.42
CBX4-204ENST00000495122 A2ML1A8K2U0 1454 aa23.94■■□□□ 1.42
CBX4-204ENST00000495122 CERKQ8TCT0 537 aa23.93■■□□□ 1.42
CBX4-204ENST00000495122 DUOX2Q9NRD8 1548 aa23.93■■□□□ 1.42
CBX4-204ENST00000495122 ABCC3O15438 1527 aa23.92■■□□□ 1.42
CBX4-204ENST00000495122 DEPDC5O75140 1603 aa23.92■■□□□ 1.42
CBX4-204ENST00000495122 HFM1A2PYH4 1435 aa23.91■■□□□ 1.42
CBX4-204ENST00000495122 ACIN1Q9UKV3 1341 aaKnown RBP23.9■■□□□ 1.42
CBX4-204ENST00000495122 ITGAEP38570 1179 aa23.88■■□□□ 1.41
CBX4-204ENST00000495122 PRDM15P57071 1507 aaPredicted RBP23.88■■□□□ 1.41
CBX4-204ENST00000495122 SPATA31D1Q6ZQQ2 1576 aa23.86■■□□□ 1.41
CBX4-204ENST00000495122 ABCC5O15440 1437 aa23.86■■□□□ 1.41
CBX4-204ENST00000495122 NEURL4Q96JN8 1562 aa23.86■■□□□ 1.41
CBX4-204ENST00000495122 DAPK1P53355 1430 aa23.85■■□□□ 1.41
CBX4-204ENST00000495122 TNRQ92752 1358 aa23.85■■□□□ 1.41
CBX4-204ENST00000495122 WASHC2CQ9Y4E1 1318 aa23.84■■□□□ 1.41
CBX4-204ENST00000495122 GCC2Q8IWJ2 1684 aa23.83■■□□□ 1.4
CBX4-204ENST00000495122 IQSEC2Q5JU85 1478 aa23.82■■□□□ 1.4
CBX4-204ENST00000495122 ERBINQ96RT1 1412 aa23.82■■□□□ 1.4
CBX4-204ENST00000495122 UBR1Q8IWV7 1749 aa23.81■■□□□ 1.4
CBX4-204ENST00000495122 NLRP1Q9C000 1473 aa23.81■■□□□ 1.4
CBX4-204ENST00000495122 NCKAP5LQ9HCH0 1330 aa23.81■■□□□ 1.4
CBX4-204ENST00000495122 FBXO31Q5XUX0 539 aaPredicted RBP23.8■■□□□ 1.4
CBX4-204ENST00000495122 KIF15Q9NS87 1388 aa23.79■■□□□ 1.4
CBX4-204ENST00000495122 UGGT1Q9NYU2 1555 aa23.78■■□□□ 1.4
CBX4-204ENST00000495122 PKD2Q13563 968 aa23.78■■□□□ 1.4
CBX4-204ENST00000495122 ERVK-7P63135 1459 aa23.78■■□□□ 1.4
CBX4-204ENST00000495122 ROCK1Q13464 1354 aa23.78■■□□□ 1.4
CBX4-204ENST00000495122 NAIPQ13075 1403 aa23.76■■□□□ 1.39
CBX4-204ENST00000495122 IQGAP1P46940 1657 aa23.75■■□□□ 1.39
CBX4-204ENST00000495122 ADGRL2O95490 1459 aa23.73■■□□□ 1.39
CBX4-204ENST00000495122 VWDEQ8N2E2 1590 aa23.73■■□□□ 1.39
CBX4-204ENST00000495122 KDM5AP29375 1690 aaKnown RBP23.7■■□□□ 1.38
CBX4-204ENST00000495122 TIMELESSQ9UNS1 1208 aa23.69■■□□□ 1.38
CBX4-204ENST00000495122 PIK3C2BO00750 1634 aa23.69■■□□□ 1.38
CBX4-204ENST00000495122 ARHGAP31Q2M1Z3 1444 aa23.68■■□□□ 1.38
CBX4-204ENST00000495122 ZNF335Q9H4Z2 1342 aaPredicted RBP23.68■■□□□ 1.38
CBX4-204ENST00000495122 LMTK2Q8IWU2 1503 aa23.68■■□□□ 1.38
CBX4-204ENST00000495122 STRCP1A6NGW2 1772 aa23.68■■□□□ 1.38
CBX4-204ENST00000495122 ANKRD30AQ9BXX3 1397 aa23.67■■□□□ 1.38
CBX4-204ENST00000495122 RRP7BPQ9NSQ0 103 aa23.67■■□□□ 1.38
CBX4-204ENST00000495122 MED14O60244 1454 aa23.67■■□□□ 1.38
CBX4-204ENST00000495122 EFCAB6Q5THR3 1501 aa23.64■■□□□ 1.38
CBX4-204ENST00000495122 MYO5BQ9ULV0 1848 aa23.63■■□□□ 1.37
CBX4-204ENST00000495122 SYNMO15061 1565 aa23.62■■□□□ 1.37
CBX4-204ENST00000495122 CPS1P31327 1500 aa23.62■■□□□ 1.37
CBX4-204ENST00000495122 UNC13BO14795 1591 aa23.61■■□□□ 1.37
CBX4-204ENST00000495122 TET3O43151 1660 aa23.61■■□□□ 1.37
CBX4-204ENST00000495122 THEMISQ8N1K5 641 aaPredicted RBP23.61■■□□□ 1.37
CBX4-204ENST00000495122 NPHP4O75161 1426 aaPredicted RBP23.6■■□□□ 1.37
CBX4-204ENST00000495122 CHIC2Q9UKJ5 165 aa23.6■■□□□ 1.37
CBX4-204ENST00000495122 SLIT1O75093 1534 aa23.59■■□□□ 1.37
CBX4-204ENST00000495122 ZNF316A6NFI3 1004 aaPredicted RBP23.59■■□□□ 1.37
CBX4-204ENST00000495122 KANK1Q14678 1352 aa23.59■■□□□ 1.37
CBX4-204ENST00000495122 ARHGAP23Q9P227 1491 aa23.57■■□□□ 1.36
CBX4-204ENST00000495122 ANKLE2Q86XL3 938 aa23.57■■□□□ 1.36
CBX4-204ENST00000495122 XIRP1Q702N8 1843 aaKnown RBP23.55■■□□□ 1.36
CBX4-204ENST00000495122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.54■■□□□ 1.364e-10■■□□□ 12.9
CBX4-204ENST00000495122 SCAF11Q99590 1463 aaKnown RBP23.53■■□□□ 1.36
CBX4-204ENST00000495122 ANKRD50Q9ULJ7 1429 aa23.52■■□□□ 1.36
CBX4-204ENST00000495122 E9PCH4 1651 aa23.52■■□□□ 1.36
CBX4-204ENST00000495122 IQGAP3Q86VI3 1631 aa23.51■■□□□ 1.35
CBX4-204ENST00000495122 ADGRB3O60242 1522 aa23.51■■□□□ 1.35
CBX4-204ENST00000495122 NOS1P29475 1434 aa23.5■■□□□ 1.35
CBX4-204ENST00000495122 RPRD2Q5VT52 1461 aaKnown RBP23.49■■□□□ 1.35
CBX4-204ENST00000495122 ALKQ9UM73 1620 aa23.47■■□□□ 1.35
CBX4-204ENST00000495122 UBAP1LF5GYI3 381 aa23.44■■□□□ 1.34
CBX4-204ENST00000495122 TMEM131LA2VDJ0 1609 aa23.42■■□□□ 1.34
CBX4-204ENST00000495122 LRRC7Q96NW7 1537 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms