RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-231ENST00000494973 FAM135AQ9P2D6 1515 aa20.07■□□□□ 0.8
APTX-231ENST00000494973 KDM5DQ9BY66 1539 aa20.07■□□□□ 0.8
APTX-231ENST00000494973 PRDM15P57071 1507 aaPredicted RBP20.06■□□□□ 0.8
APTX-231ENST00000494973 KANK1Q14678 1352 aa20.06■□□□□ 0.8
APTX-231ENST00000494973 KIF3BO15066 747 aa20.04■□□□□ 0.8
APTX-231ENST00000494973 TRIM52Q96A61 297 aa20.01■□□□□ 0.79
APTX-231ENST00000494973 PPP6R1Q9UPN7 881 aa20.01■□□□□ 0.79
APTX-231ENST00000494973 IQGAP3Q86VI3 1631 aa20.01■□□□□ 0.79
APTX-231ENST00000494973 ZC3H13Q5T200 1668 aaKnown RBP20■□□□□ 0.79
APTX-231ENST00000494973 NUP155O75694 1391 aa20■□□□□ 0.79
APTX-231ENST00000494973 MROH1Q8NDA8 1641 aa19.98■□□□□ 0.79
APTX-231ENST00000494973 VWDEQ8N2E2 1590 aa19.98■□□□□ 0.79
APTX-231ENST00000494973 ARID4BQ4LE39 1312 aaPredicted RBP19.96■□□□□ 0.79
APTX-231ENST00000494973 LMTK2Q8IWU2 1503 aa19.96■□□□□ 0.79
APTX-231ENST00000494973 TET3O43151 1660 aa19.94■□□□□ 0.78
APTX-231ENST00000494973 GGT6Q6P531 493 aa19.93■□□□□ 0.78
APTX-231ENST00000494973 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.93■□□□□ 0.78
APTX-231ENST00000494973 PZPP20742 1482 aa19.92■□□□□ 0.78
APTX-231ENST00000494973 SLC4A1APQ9BWU0 796 aaKnown RBP19.92■□□□□ 0.78
APTX-231ENST00000494973 SIGLEC1Q9BZZ2 1709 aa19.92■□□□□ 0.78
APTX-231ENST00000494973 CLSPNQ9HAW4 1339 aa19.92■□□□□ 0.78
APTX-231ENST00000494973 DHX57Q6P158 1386 aaKnown RBP19.92■□□□□ 0.78
APTX-231ENST00000494973 CNTLNQ9NXG0 1405 aa19.92■□□□□ 0.78
APTX-231ENST00000494973 MPHOSPH9Q99550 1183 aa19.91■□□□□ 0.78
APTX-231ENST00000494973 ABCC3O15438 1527 aa19.91■□□□□ 0.78
APTX-231ENST00000494973 ESF1Q9H501 851 aaKnown RBP19.9■□□□□ 0.78
APTX-231ENST00000494973 EFCAB6Q5THR3 1501 aa19.89■□□□□ 0.77
APTX-231ENST00000494973 RPRD2Q5VT52 1461 aaKnown RBP19.89■□□□□ 0.77
APTX-231ENST00000494973 WASHC2CQ9Y4E1 1318 aa19.89■□□□□ 0.77
APTX-231ENST00000494973 CEP152O94986 1710 aa19.88■□□□□ 0.77
APTX-231ENST00000494973 CAMSAP1Q5T5Y3 1602 aa19.87■□□□□ 0.77
APTX-231ENST00000494973 CCER1Q8TC90 406 aaPredicted RBP19.86■□□□□ 0.77
APTX-231ENST00000494973 MROH2AA6NES4 1674 aa19.86■□□□□ 0.77
APTX-231ENST00000494973 ARHGAP31Q2M1Z3 1444 aa19.85■□□□□ 0.77
APTX-231ENST00000494973 FER1L4A9Z1Z3 1794 aa19.83■□□□□ 0.77
APTX-231ENST00000494973 PKD2Q13563 968 aa19.83■□□□□ 0.77
APTX-231ENST00000494973 CLTCQ00610 1675 aaKnown RBP19.82■□□□□ 0.76
APTX-231ENST00000494973 MLECQ14165 292 aa19.82■□□□□ 0.76
APTX-231ENST00000494973 E9PCH4 1651 aa19.81■□□□□ 0.76
APTX-231ENST00000494973 ADAMTSL3P82987 1691 aa19.78■□□□□ 0.76
APTX-231ENST00000494973 NPATQ14207 1427 aa19.78■□□□□ 0.76
APTX-231ENST00000494973 SPHKAPQ2M3C7 1700 aa19.77■□□□□ 0.76
APTX-231ENST00000494973 TRPM2O94759 1503 aa19.76■□□□□ 0.75
APTX-231ENST00000494973 MADDQ8WXG6 1647 aa19.75■□□□□ 0.75
APTX-231ENST00000494973 PTPRTO14522 1441 aa19.75■□□□□ 0.75
APTX-231ENST00000494973 ANKRD30BQ9BXX2 1392 aa19.74■□□□□ 0.75
APTX-231ENST00000494973 ZMYM3Q14202 1370 aa19.73■□□□□ 0.75
APTX-231ENST00000494973 CCDC144AA2RUR9 1427 aa19.73■□□□□ 0.75
APTX-231ENST00000494973 PREX1Q8TCU6 1659 aa19.72■□□□□ 0.75
APTX-231ENST00000494973 SPATA31D1Q6ZQQ2 1576 aa19.71■□□□□ 0.75
APTX-231ENST00000494973 NOS1P29475 1434 aa19.71■□□□□ 0.75
APTX-231ENST00000494973 ERVK-7P63135 1459 aa19.71■□□□□ 0.75
APTX-231ENST00000494973 RIMS1Q86UR5 1692 aaKnown RBP19.71■□□□□ 0.75
APTX-231ENST00000494973 C3P01024 1663 aa19.68■□□□□ 0.74
APTX-231ENST00000494973 FOXD1Q16676 465 aa19.67■□□□□ 0.74
APTX-231ENST00000494973 ZEB1P37275 1124 aaPredicted RBP19.66■□□□□ 0.74
APTX-231ENST00000494973 PLA2R1Q13018 1463 aa19.66■□□□□ 0.74
APTX-231ENST00000494973 NEURL4Q96JN8 1562 aa19.66■□□□□ 0.74
APTX-231ENST00000494973 SLC52A1Q9NWF4 448 aa19.65■□□□□ 0.74
APTX-231ENST00000494973 TIMELESSQ9UNS1 1208 aa19.65■□□□□ 0.74
APTX-231ENST00000494973 SYNMO15061 1565 aa19.64■□□□□ 0.73
APTX-231ENST00000494973 PIK3C2BO00750 1634 aa19.64■□□□□ 0.73
APTX-231ENST00000494973 CLTCL1P53675 1640 aa19.62■□□□□ 0.73
APTX-231ENST00000494973 TNRQ92752 1358 aa19.62■□□□□ 0.73
APTX-231ENST00000494973 CFAP65Q6ZU64 1925 aaKnown RBP19.62■□□□□ 0.73
APTX-231ENST00000494973 NLRP1Q9C000 1473 aa19.61■□□□□ 0.73
APTX-231ENST00000494973 KIF1BO60333 1816 aa19.61■□□□□ 0.73
APTX-231ENST00000494973 PTPRMP28827 1452 aa19.6■□□□□ 0.73
APTX-231ENST00000494973 TONSLQ96HA7 1378 aa19.6■□□□□ 0.73
APTX-231ENST00000494973 KDM5AP29375 1690 aaKnown RBP19.59■□□□□ 0.73
APTX-231ENST00000494973 FBXO31Q5XUX0 539 aaPredicted RBP19.57■□□□□ 0.72
APTX-231ENST00000494973 SETD1BQ9UPS6 1966 aaKnown RBP19.56■□□□□ 0.72
APTX-231ENST00000494973 NEUROD1Q13562 356 aa19.56■□□□□ 0.72
APTX-231ENST00000494973 ADGRB3O60242 1522 aa19.56■□□□□ 0.72
APTX-231ENST00000494973 SIN3AQ96ST3 1273 aa19.55■□□□□ 0.72
APTX-231ENST00000494973 MYO3AQ8NEV4 1616 aa19.54■□□□□ 0.72
APTX-231ENST00000494973 UGGT1Q9NYU2 1555 aa19.54■□□□□ 0.72
APTX-231ENST00000494973 STAC3Q96MF2 364 aa19.54■□□□□ 0.72
APTX-231ENST00000494973 SPATA31E1Q6ZUB1 1445 aa19.53■□□□□ 0.72
APTX-231ENST00000494973 CEBPAP49715 358 aaPredicted RBP19.52■□□□□ 0.72
APTX-231ENST00000494973 IDI1Q13907 227 aa19.51■□□□□ 0.71
APTX-231ENST00000494973 STAG3Q9UJ98 1225 aa19.51■□□□□ 0.71
APTX-231ENST00000494973 ZNF142P52746 1687 aaPredicted RBP19.51■□□□□ 0.71
APTX-231ENST00000494973 TMEM131LA2VDJ0 1609 aa19.51■□□□□ 0.71
APTX-231ENST00000494973 RPGRIP1LQ68CZ1 1315 aa19.51■□□□□ 0.71
APTX-231ENST00000494973 A2ML1A8K2U0 1454 aa19.5■□□□□ 0.71
APTX-231ENST00000494973 UHRF1BP1Q6BDS2 1440 aa19.49■□□□□ 0.71
APTX-231ENST00000494973 CEP170BQ9Y4F5 1589 aaPredicted RBP19.49■□□□□ 0.71
APTX-231ENST00000494973 KDM4FA0A1W2PPD8 638 aa19.48■□□□□ 0.71
APTX-231ENST00000494973 CHGAP10645 457 aaKnown RBP19.47■□□□□ 0.71
APTX-231ENST00000494973 UBR1Q8IWV7 1749 aa19.46■□□□□ 0.71
APTX-231ENST00000494973 PLPPR3Q6T4P5 718 aa19.46■□□□□ 0.71
APTX-231ENST00000494973 HDGFP51858 240 aaKnown RBP19.45■□□□□ 0.7
APTX-231ENST00000494973 MYOM2P54296 1465 aa19.45■□□□□ 0.7
APTX-231ENST00000494973 ZNF326Q5BKZ1 582 aaKnown RBP19.44■□□□□ 0.7
APTX-231ENST00000494973 IFT172Q9UG01 1749 aa19.43■□□□□ 0.7
APTX-231ENST00000494973 L3MBTL2Q969R5 705 aa19.43■□□□□ 0.7
APTX-231ENST00000494973 PPLO60437 1756 aa19.42■□□□□ 0.7
APTX-231ENST00000494973 RGL3Q3MIN7 710 aa19.42■□□□□ 0.7
APTX-231ENST00000494973 THEMISQ8N1K5 641 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms