RNA–Protein interactions for RNA: ENST00000494641.1

TRMT2A-219, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

TSL 3

Gene TRMT2A, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-219ENST00000494641 MED1Q15648 1581 aaPredicted RBP28.16■■■□□ 2.1
TRMT2A-219ENST00000494641 POLR1AO95602 1720 aaPredicted RBP28.16■■■□□ 2.1
TRMT2A-219ENST00000494641 SHANK2Q9UPX8 1470 aa28.15■■■□□ 2.1
TRMT2A-219ENST00000494641 TNRQ92752 1358 aa28.14■■■□□ 2.1
TRMT2A-219ENST00000494641 CPS1P31327 1500 aa28.14■■■□□ 2.1
TRMT2A-219ENST00000494641 PZPP20742 1482 aa28.13■■■□□ 2.09
TRMT2A-219ENST00000494641 ALKQ9UM73 1620 aa28.12■■■□□ 2.09
TRMT2A-219ENST00000494641 VWDEQ8N2E2 1590 aa28.11■■■□□ 2.09
TRMT2A-219ENST00000494641 PIP4K2BP78356 416 aa28.11■■■□□ 2.09
TRMT2A-219ENST00000494641 EHBP1L1Q8N3D4 1523 aa28.09■■■□□ 2.09
TRMT2A-219ENST00000494641 KDM5DQ9BY66 1539 aa28.09■■■□□ 2.09
TRMT2A-219ENST00000494641 CEP162Q5TB80 1403 aa28.09■■■□□ 2.09
TRMT2A-219ENST00000494641 KIF3BO15066 747 aa28.07■■■□□ 2.08
TRMT2A-219ENST00000494641 SCAF1Q9H7N4 1312 aaKnown RBP28.07■■■□□ 2.08
TRMT2A-219ENST00000494641 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.07■■■□□ 2.084e-12■■■■■ 60.3
TRMT2A-219ENST00000494641 FAM135AQ9P2D6 1515 aa28.07■■■□□ 2.08
TRMT2A-219ENST00000494641 TOM1O60784 492 aa28.05■■■□□ 2.08
TRMT2A-219ENST00000494641 MED14O60244 1454 aa28.03■■■□□ 2.08
TRMT2A-219ENST00000494641 CCDC141Q6ZP82 1450 aa28.03■■■□□ 2.08
TRMT2A-219ENST00000494641 MIA2Q96PC5 1412 aa28.03■■■□□ 2.08
TRMT2A-219ENST00000494641 DEPDC5O75140 1603 aa28■■■□□ 2.07
TRMT2A-219ENST00000494641 ANKLE2Q86XL3 938 aa28■■■□□ 2.07
TRMT2A-219ENST00000494641 CAMSAP2Q08AD1 1489 aa28■■■□□ 2.07
TRMT2A-219ENST00000494641 NLRP1Q9C000 1473 aa28■■■□□ 2.07
TRMT2A-219ENST00000494641 NPHP4O75161 1426 aaPredicted RBP28■■■□□ 2.07
TRMT2A-219ENST00000494641 WASHC2CQ9Y4E1 1318 aa27.99■■■□□ 2.07
TRMT2A-219ENST00000494641 UGGT1Q9NYU2 1555 aa27.99■■■□□ 2.07
TRMT2A-219ENST00000494641 THEMISQ8N1K5 641 aaPredicted RBP27.97■■■□□ 2.07
TRMT2A-219ENST00000494641 STRCP1A6NGW2 1772 aa27.96■■■□□ 2.07
TRMT2A-219ENST00000494641 NCOA2Q15596 1464 aa27.95■■■□□ 2.07
TRMT2A-219ENST00000494641 IQGAP1P46940 1657 aa27.92■■■□□ 2.06
TRMT2A-219ENST00000494641 LRRC7Q96NW7 1537 aa27.91■■■□□ 2.06
TRMT2A-219ENST00000494641 ARHGEF5Q12774 1597 aa27.9■■■□□ 2.06
TRMT2A-219ENST00000494641 RNF17Q9BXT8 1623 aaKnown RBP27.89■■■□□ 2.06
TRMT2A-219ENST00000494641 ABCC3O15438 1527 aa27.89■■■□□ 2.06
TRMT2A-219ENST00000494641 RSPH4AQ5TD94 716 aa27.89■■■□□ 2.06
TRMT2A-219ENST00000494641 ERVK-7P63135 1459 aa27.83■■■□□ 2.05
TRMT2A-219ENST00000494641 MROH1Q8NDA8 1641 aa27.83■■■□□ 2.05
TRMT2A-219ENST00000494641 ZC3H13Q5T200 1668 aaKnown RBP27.83■■■□□ 2.05
TRMT2A-219ENST00000494641 SYNMO15061 1565 aa27.82■■■□□ 2.04
TRMT2A-219ENST00000494641 PHF23Q9BUL5 403 aaPredicted RBP27.81■■■□□ 2.04
TRMT2A-219ENST00000494641 MAST1Q9Y2H9 1570 aa27.79■■■□□ 2.04
TRMT2A-219ENST00000494641 SENP3Q9H4L4 574 aaPredicted RBP27.78■■■□□ 2.04
TRMT2A-219ENST00000494641 TSPY4P0CV99 314 aa27.77■■■□□ 2.04
TRMT2A-219ENST00000494641 TSPY10P0CW01 314 aa27.77■■■□□ 2.04
TRMT2A-219ENST00000494641 UBR1Q8IWV7 1749 aa27.77■■■□□ 2.04
TRMT2A-219ENST00000494641 EIF2AK4Q9P2K8 1649 aaKnown RBP27.75■■■□□ 2.03
TRMT2A-219ENST00000494641 RGS17Q9UGC6 210 aaPredicted RBP27.74■■■□□ 2.03
TRMT2A-219ENST00000494641 SCAF11Q99590 1463 aaKnown RBP27.73■■■□□ 2.03
TRMT2A-219ENST00000494641 ARHGAP23Q9P227 1491 aa27.73■■■□□ 2.03
TRMT2A-219ENST00000494641 LTKP29376 864 aa27.72■■■□□ 2.03
TRMT2A-219ENST00000494641 CEP152O94986 1710 aa27.72■■■□□ 2.03
TRMT2A-219ENST00000494641 XIRP1Q702N8 1843 aaKnown RBP27.71■■■□□ 2.03
TRMT2A-219ENST00000494641 SLIT1O75093 1534 aa27.7■■■□□ 2.02
TRMT2A-219ENST00000494641 LRRC9Q6ZRR7 1453 aa27.69■■■□□ 2.02
TRMT2A-219ENST00000494641 CFAP65Q6ZU64 1925 aaKnown RBP27.65■■■□□ 2.02
TRMT2A-219ENST00000494641 ARHGAP31Q2M1Z3 1444 aa27.62■■■□□ 2.01
TRMT2A-219ENST00000494641 TXNDC2Q86VQ3 553 aa27.62■■■□□ 2.01
TRMT2A-219ENST00000494641 DUOX2Q9NRD8 1548 aa27.62■■■□□ 2.01
TRMT2A-219ENST00000494641 PRDM15P57071 1507 aaPredicted RBP27.61■■■□□ 2.01
TRMT2A-219ENST00000494641 KANK4Q5T7N3 995 aaPredicted RBP27.59■■■□□ 2.01
TRMT2A-219ENST00000494641 FAM135BQ49AJ0 1406 aa27.58■■■□□ 2
TRMT2A-219ENST00000494641 MYOM3Q5VTT5 1437 aa27.57■■■□□ 2
TRMT2A-219ENST00000494641 PIK3C2BO00750 1634 aa27.56■■■□□ 2
TRMT2A-219ENST00000494641 VPS8Q8N3P4 1428 aa27.56■■■□□ 2
TRMT2A-219ENST00000494641 TMEM2Q9UHN6 1383 aa27.55■■■□□ 2
TRMT2A-219ENST00000494641 KIF15Q9NS87 1388 aa27.53■■■□□ 2
TRMT2A-219ENST00000494641 POTEAQ6S8J7 498 aa27.52■■■□□ 2
TRMT2A-219ENST00000494641 MAP3K1Q13233 1512 aa27.51■■■□□ 2
TRMT2A-219ENST00000494641 TMEM94Q12767 1356 aa27.51■■□□□ 1.99
TRMT2A-219ENST00000494641 ERBINQ96RT1 1412 aa27.5■■□□□ 1.99
TRMT2A-219ENST00000494641 EID1Q9Y6B2 187 aa27.5■■□□□ 1.99
TRMT2A-219ENST00000494641 ABCC5O15440 1437 aa27.5■■□□□ 1.99
TRMT2A-219ENST00000494641 TET3O43151 1660 aa27.49■■□□□ 1.99
TRMT2A-219ENST00000494641 CROCC2H7BZ55 1655 aa27.47■■□□□ 1.99
TRMT2A-219ENST00000494641 ROBO1Q9Y6N7 1651 aa27.46■■□□□ 1.99
TRMT2A-219ENST00000494641 EFCAB6Q5THR3 1501 aa27.46■■□□□ 1.99
TRMT2A-219ENST00000494641 KDM5AP29375 1690 aaKnown RBP27.46■■□□□ 1.99
TRMT2A-219ENST00000494641 RRP7BPQ9NSQ0 103 aa27.45■■□□□ 1.98
TRMT2A-219ENST00000494641 KCNA6P17658 529 aa27.44■■□□□ 1.98
TRMT2A-219ENST00000494641 IDI1Q13907 227 aa27.44■■□□□ 1.98
TRMT2A-219ENST00000494641 RBM33Q96EV2 1170 aaKnown RBP27.44■■□□□ 1.98
TRMT2A-219ENST00000494641 LMTK2Q8IWU2 1503 aa27.42■■□□□ 1.98
TRMT2A-219ENST00000494641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.42■■□□□ 1.98
TRMT2A-219ENST00000494641 SLC26A8Q96RN1 970 aa27.41■■□□□ 1.98
TRMT2A-219ENST00000494641 NWD1Q149M9 1564 aa27.4■■□□□ 1.98
TRMT2A-219ENST00000494641 NOS1P29475 1434 aa27.38■■□□□ 1.97
TRMT2A-219ENST00000494641 DAPK1P53355 1430 aa27.38■■□□□ 1.97
TRMT2A-219ENST00000494641 PROSER2Q86WR7 435 aaPredicted RBP27.37■■□□□ 1.97
TRMT2A-219ENST00000494641 PTPN23Q9H3S7 1636 aa27.37■■□□□ 1.97
TRMT2A-219ENST00000494641 STAG3Q9UJ98 1225 aa27.36■■□□□ 1.97
TRMT2A-219ENST00000494641 NKTRP30414 1462 aaKnown RBP27.36■■□□□ 1.97
TRMT2A-219ENST00000494641 ADGRB3O60242 1522 aa27.35■■□□□ 1.97
TRMT2A-219ENST00000494641 KANK1Q14678 1352 aa27.34■■□□□ 1.97
TRMT2A-219ENST00000494641 LOC105371045A0A1W2PR82 267 aa27.33■■□□□ 1.97
TRMT2A-219ENST00000494641 SETD1AO15047 1707 aaKnown RBP27.32■■□□□ 1.96
TRMT2A-219ENST00000494641 ZFYVE9O95405 1425 aa27.27■■□□□ 1.96
TRMT2A-219ENST00000494641 FGD6Q6ZV73 1430 aa27.27■■□□□ 1.96
TRMT2A-219ENST00000494641 SLAIN2Q9P270 581 aa27.27■■□□□ 1.96
TRMT2A-219ENST00000494641 PHLPP1O60346 1717 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms