RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 UHRF1BP1Q6BDS2 1440 aa22.74■■□□□ 1.23
ATG4B-224ENST00000494132 DUOX2Q9NRD8 1548 aa22.73■■□□□ 1.23
ATG4B-224ENST00000494132 KIF15Q9NS87 1388 aa22.73■■□□□ 1.23
ATG4B-224ENST00000494132 KDM5DQ9BY66 1539 aa22.72■■□□□ 1.23
ATG4B-224ENST00000494132 CEP152O94986 1710 aa22.72■■□□□ 1.23
ATG4B-224ENST00000494132 RRP7BPQ9NSQ0 103 aa22.72■■□□□ 1.23
ATG4B-224ENST00000494132 CFAP65Q6ZU64 1925 aaKnown RBP22.71■■□□□ 1.23
ATG4B-224ENST00000494132 MROH1Q8NDA8 1641 aa22.71■■□□□ 1.23
ATG4B-224ENST00000494132 MYO3AQ8NEV4 1616 aa22.69■■□□□ 1.22
ATG4B-224ENST00000494132 PTPRKQ15262 1439 aa22.68■■□□□ 1.22
ATG4B-224ENST00000494132 NPATQ14207 1427 aa22.67■■□□□ 1.22
ATG4B-224ENST00000494132 PPP6R1Q9UPN7 881 aa22.67■■□□□ 1.22
ATG4B-224ENST00000494132 STRCQ7RTU9 1775 aa22.66■■□□□ 1.22
ATG4B-224ENST00000494132 WASHC2CQ9Y4E1 1318 aa22.66■■□□□ 1.22
ATG4B-224ENST00000494132 ZC3H13Q5T200 1668 aaKnown RBP22.66■■□□□ 1.22
ATG4B-224ENST00000494132 FAM135AQ9P2D6 1515 aa22.65■■□□□ 1.22
ATG4B-224ENST00000494132 ANKRD30AQ9BXX3 1397 aa22.64■■□□□ 1.22
ATG4B-224ENST00000494132 ABCC3O15438 1527 aa22.64■■□□□ 1.21
ATG4B-224ENST00000494132 ERBINQ96RT1 1412 aa22.64■■□□□ 1.21
ATG4B-224ENST00000494132 ZNF142P52746 1687 aaPredicted RBP22.63■■□□□ 1.21
ATG4B-224ENST00000494132 CAMSAP1Q5T5Y3 1602 aa22.63■■□□□ 1.21
ATG4B-224ENST00000494132 NCOA1Q15788 1441 aa22.63■■□□□ 1.21
ATG4B-224ENST00000494132 FBXO31Q5XUX0 539 aaPredicted RBP22.62■■□□□ 1.21
ATG4B-224ENST00000494132 ADGRL2O95490 1459 aa22.61■■□□□ 1.21
ATG4B-224ENST00000494132 DEPDC5O75140 1603 aa22.61■■□□□ 1.21
ATG4B-224ENST00000494132 PZPP20742 1482 aa22.6■■□□□ 1.21
ATG4B-224ENST00000494132 CEP170BQ9Y4F5 1589 aaPredicted RBP22.6■■□□□ 1.21
ATG4B-224ENST00000494132 PRDM15P57071 1507 aaPredicted RBP22.6■■□□□ 1.21
ATG4B-224ENST00000494132 ITGAEP38570 1179 aa22.59■■□□□ 1.21
ATG4B-224ENST00000494132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.59■■□□□ 1.216e-18■■□□□ 11.7
ATG4B-224ENST00000494132 TNRQ92752 1358 aa22.55■■□□□ 1.2
ATG4B-224ENST00000494132 ANKRD50Q9ULJ7 1429 aa22.51■■□□□ 1.19
ATG4B-224ENST00000494132 A2ML1A8K2U0 1454 aa22.5■■□□□ 1.19
ATG4B-224ENST00000494132 SPATA31D1Q6ZQQ2 1576 aa22.5■■□□□ 1.19
ATG4B-224ENST00000494132 ERVK-7P63135 1459 aa22.49■■□□□ 1.19
ATG4B-224ENST00000494132 RRBP1Q9P2E9 1410 aaKnown RBP22.48■■□□□ 1.19
ATG4B-224ENST00000494132 VWDEQ8N2E2 1590 aa22.48■■□□□ 1.19
ATG4B-224ENST00000494132 KANK1Q14678 1352 aa22.48■■□□□ 1.19
ATG4B-224ENST00000494132 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.47■■□□□ 1.19
ATG4B-224ENST00000494132 NCKAP5LQ9HCH0 1330 aa22.46■■□□□ 1.19
ATG4B-224ENST00000494132 POLR1AO95602 1720 aaPredicted RBP22.45■■□□□ 1.18
ATG4B-224ENST00000494132 UNC13BO14795 1591 aa22.44■■□□□ 1.18
ATG4B-224ENST00000494132 ROCK1Q13464 1354 aa22.44■■□□□ 1.18
ATG4B-224ENST00000494132 UGGT1Q9NYU2 1555 aa22.42■■□□□ 1.18
ATG4B-224ENST00000494132 LMTK2Q8IWU2 1503 aa22.42■■□□□ 1.18
ATG4B-224ENST00000494132 PLA2R1Q13018 1463 aa22.42■■□□□ 1.18
ATG4B-224ENST00000494132 NLRP1Q9C000 1473 aa22.42■■□□□ 1.18
ATG4B-224ENST00000494132 ILDR1Q86SU0 546 aaPredicted RBP22.42■■□□□ 1.18
ATG4B-224ENST00000494132 EFCAB6Q5THR3 1501 aa22.41■■□□□ 1.18
ATG4B-224ENST00000494132 ARHGAP31Q2M1Z3 1444 aa22.4■■□□□ 1.18
ATG4B-224ENST00000494132 UBR1Q8IWV7 1749 aa22.4■■□□□ 1.18
ATG4B-224ENST00000494132 DMRT2Q9Y5R5 561 aa22.4■■□□□ 1.18
ATG4B-224ENST00000494132 PTPRTO14522 1441 aa22.4■■□□□ 1.18
ATG4B-224ENST00000494132 TET3O43151 1660 aa22.39■■□□□ 1.18
ATG4B-224ENST00000494132 GCC2Q8IWJ2 1684 aa22.39■■□□□ 1.17
ATG4B-224ENST00000494132 PIK3C2BO00750 1634 aa22.37■■□□□ 1.17
ATG4B-224ENST00000494132 SYNMO15061 1565 aa22.36■■□□□ 1.17
ATG4B-224ENST00000494132 NEURL4Q96JN8 1562 aa22.36■■□□□ 1.17
ATG4B-224ENST00000494132 IQGAP3Q86VI3 1631 aa22.35■■□□□ 1.17
ATG4B-224ENST00000494132 E9PCH4 1651 aa22.34■■□□□ 1.17
ATG4B-224ENST00000494132 PKD2Q13563 968 aa22.33■■□□□ 1.17
ATG4B-224ENST00000494132 THEMISQ8N1K5 641 aaPredicted RBP22.32■■□□□ 1.16
ATG4B-224ENST00000494132 MYO5BQ9ULV0 1848 aa22.31■■□□□ 1.16
ATG4B-224ENST00000494132 NUP155O75694 1391 aa22.29■■□□□ 1.16
ATG4B-224ENST00000494132 NOS1P29475 1434 aa22.29■■□□□ 1.16
ATG4B-224ENST00000494132 LTBP4Q8N2S1 1624 aa22.28■■□□□ 1.16
ATG4B-224ENST00000494132 CERKQ8TCT0 537 aa22.28■■□□□ 1.16
ATG4B-224ENST00000494132 NAIPQ13075 1403 aa22.28■■□□□ 1.16
ATG4B-224ENST00000494132 IQGAP1P46940 1657 aa22.26■■□□□ 1.15
ATG4B-224ENST00000494132 ANKLE2Q86XL3 938 aa22.26■■□□□ 1.15
ATG4B-224ENST00000494132 RPRD2Q5VT52 1461 aaKnown RBP22.26■■□□□ 1.15
ATG4B-224ENST00000494132 ZNF335Q9H4Z2 1342 aaPredicted RBP22.26■■□□□ 1.15
ATG4B-224ENST00000494132 IDI1Q13907 227 aa22.25■■□□□ 1.15
ATG4B-224ENST00000494132 FBXO41Q8TF61 875 aa22.23■■□□□ 1.15
ATG4B-224ENST00000494132 STAG3Q9UJ98 1225 aa22.23■■□□□ 1.15
ATG4B-224ENST00000494132 KDM5AP29375 1690 aaKnown RBP22.23■■□□□ 1.15
ATG4B-224ENST00000494132 NPHP4O75161 1426 aaPredicted RBP22.23■■□□□ 1.15
ATG4B-224ENST00000494132 ADGRB3O60242 1522 aa22.22■■□□□ 1.15
ATG4B-224ENST00000494132 HFM1A2PYH4 1435 aa22.21■■□□□ 1.15
ATG4B-224ENST00000494132 SLIT1O75093 1534 aa22.21■■□□□ 1.15
ATG4B-224ENST00000494132 MED14O60244 1454 aa22.2■■□□□ 1.14
ATG4B-224ENST00000494132 ARHGAP23Q9P227 1491 aa22.2■■□□□ 1.14
ATG4B-224ENST00000494132 SPHKAPQ2M3C7 1700 aa22.2■■□□□ 1.14
ATG4B-224ENST00000494132 SCAF11Q99590 1463 aaKnown RBP22.19■■□□□ 1.14
ATG4B-224ENST00000494132 LTKP29376 864 aa22.18■■□□□ 1.14
ATG4B-224ENST00000494132 TMEM2Q9UHN6 1383 aa22.16■■□□□ 1.14
ATG4B-224ENST00000494132 TXNDC2Q86VQ3 553 aa22.16■■□□□ 1.14
ATG4B-224ENST00000494132 STRCP1A6NGW2 1772 aa22.16■■□□□ 1.14
ATG4B-224ENST00000494132 TMEM131LA2VDJ0 1609 aa22.16■■□□□ 1.14
ATG4B-224ENST00000494132 SLC52A1Q9NWF4 448 aa22.15■■□□□ 1.14
ATG4B-224ENST00000494132 TRIM52Q96A61 297 aa22.14■■□□□ 1.13
ATG4B-224ENST00000494132 CHGAP10645 457 aaKnown RBP22.13■■□□□ 1.13
ATG4B-224ENST00000494132 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
ATG4B-224ENST00000494132 EID1Q9Y6B2 187 aa22.11■■□□□ 1.13
ATG4B-224ENST00000494132 CLTCL1P53675 1640 aa22.07■■□□□ 1.12
ATG4B-224ENST00000494132 CPS1P31327 1500 aa22.06■■□□□ 1.12
ATG4B-224ENST00000494132 RIMS2Q9UQ26 1411 aa22.06■■□□□ 1.12
ATG4B-224ENST00000494132 IQSEC2Q5JU85 1478 aa22.05■■□□□ 1.12
ATG4B-224ENST00000494132 NUTM2DQ5VT03 806 aaPredicted RBP22.05■■□□□ 1.12
ATG4B-224ENST00000494132 ZFYVE9O95405 1425 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms