RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-222ENST00000494012 ROCK1Q13464 1354 aa15.22■□□□□ 0.03
MACF1-222ENST00000494012 ZC3H13Q5T200 1668 aaKnown RBP15.22■□□□□ 0.03
MACF1-222ENST00000494012 RRP7BPQ9NSQ0 103 aa15.21■□□□□ 0.03
MACF1-222ENST00000494012 DEPDC5O75140 1603 aa15.21■□□□□ 0.02
MACF1-222ENST00000494012 PTPRKQ15262 1439 aa15.2■□□□□ 0.02
MACF1-222ENST00000494012 C3P01024 1663 aa15.2■□□□□ 0.02
MACF1-222ENST00000494012 KIF3BO15066 747 aa15.2■□□□□ 0.02
MACF1-222ENST00000494012 PPP6R1Q9UPN7 881 aa15.2■□□□□ 0.02
MACF1-222ENST00000494012 KDM5DQ9BY66 1539 aa15.2■□□□□ 0.02
MACF1-222ENST00000494012 GGT6Q6P531 493 aa15.19■□□□□ 0.02
MACF1-222ENST00000494012 PRDM15P57071 1507 aaPredicted RBP15.18■□□□□ 0.02
MACF1-222ENST00000494012 ITGAEP38570 1179 aa15.18■□□□□ 0.02
MACF1-222ENST00000494012 MROH1Q8NDA8 1641 aa15.17■□□□□ 0.02
MACF1-222ENST00000494012 GCC2Q8IWJ2 1684 aa15.17■□□□□ 0.02
MACF1-222ENST00000494012 ANKRD50Q9ULJ7 1429 aa15.16■□□□□ 0.02
MACF1-222ENST00000494012 CEP152O94986 1710 aa15.14■□□□□ 0.01
MACF1-222ENST00000494012 ABCC3O15438 1527 aa15.13■□□□□ 0.01
MACF1-222ENST00000494012 PREX1Q8TCU6 1659 aa15.13■□□□□ 0.01
MACF1-222ENST00000494012 UNC13BO14795 1591 aa15.13■□□□□ 0.01
MACF1-222ENST00000494012 CAMSAP1Q5T5Y3 1602 aa15.13■□□□□ 0.01
MACF1-222ENST00000494012 WASHC2CQ9Y4E1 1318 aa15.13■□□□□ 0.01
MACF1-222ENST00000494012 ZMYM3Q14202 1370 aa15.11■□□□□ 0.01
MACF1-222ENST00000494012 KANK1Q14678 1352 aa15.11■□□□□ 0.01
MACF1-222ENST00000494012 NPATQ14207 1427 aa15.1■□□□□ 0.01
MACF1-222ENST00000494012 PLPPR3Q6T4P5 718 aa15.1■□□□□ 0.01
MACF1-222ENST00000494012 VWDEQ8N2E2 1590 aa15.1■□□□□ 0.01
MACF1-222ENST00000494012 HFM1A2PYH4 1435 aa15.09■□□□□ 0.01
MACF1-222ENST00000494012 SETD1BQ9UPS6 1966 aaKnown RBP15.09■□□□□ 0.01
MACF1-222ENST00000494012 PZPP20742 1482 aa15.08■□□□□ 0.01
MACF1-222ENST00000494012 CEBPAP49715 358 aaPredicted RBP15.08■□□□□ 0
MACF1-222ENST00000494012 LMTK2Q8IWU2 1503 aa15.07■□□□□ 0
MACF1-222ENST00000494012 NAIPQ13075 1403 aa15.07■□□□□ 0
MACF1-222ENST00000494012 IQGAP3Q86VI3 1631 aa15.06■□□□□ 0
MACF1-222ENST00000494012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.06■□□□□ 04e-7■□□□□ 8.9
MACF1-222ENST00000494012 MYO3AQ8NEV4 1616 aa15.06■□□□□ 0
MACF1-222ENST00000494012 TET3O43151 1660 aa15.06■□□□□ 0
MACF1-222ENST00000494012 UHRF1BP1Q6BDS2 1440 aa15.05■□□□□ -0
MACF1-222ENST00000494012 LMTK3Q96Q04 1460 aa15.05■□□□□ -0
MACF1-222ENST00000494012 EFCAB6Q5THR3 1501 aa15.05■□□□□ -0
MACF1-222ENST00000494012 ZNF142P52746 1687 aaPredicted RBP15.04■□□□□ -0
MACF1-222ENST00000494012 ARHGAP31Q2M1Z3 1444 aa15.04■□□□□ -0
MACF1-222ENST00000494012 SPATA31D1Q6ZQQ2 1576 aa15.02■□□□□ -0
MACF1-222ENST00000494012 RPRD2Q5VT52 1461 aaKnown RBP15.01□□□□□ -0.01
MACF1-222ENST00000494012 CFAP65Q6ZU64 1925 aaKnown RBP15□□□□□ -0.01
MACF1-222ENST00000494012 CEP170BQ9Y4F5 1589 aaPredicted RBP15□□□□□ -0.01
MACF1-222ENST00000494012 ERVK-7P63135 1459 aa15□□□□□ -0.01
MACF1-222ENST00000494012 TNRQ92752 1358 aa14.99□□□□□ -0.01
MACF1-222ENST00000494012 NUP155O75694 1391 aa14.98□□□□□ -0.01
MACF1-222ENST00000494012 E9PCH4 1651 aa14.98□□□□□ -0.01
MACF1-222ENST00000494012 NLRP1Q9C000 1473 aa14.98□□□□□ -0.01
MACF1-222ENST00000494012 FBXO41Q8TF61 875 aa14.97□□□□□ -0.01
MACF1-222ENST00000494012 ACIN1Q9UKV3 1341 aaKnown RBP14.96□□□□□ -0.01
MACF1-222ENST00000494012 FBXO31Q5XUX0 539 aaPredicted RBP14.96□□□□□ -0.01
MACF1-222ENST00000494012 A2ML1A8K2U0 1454 aa14.95□□□□□ -0.02
MACF1-222ENST00000494012 SETD5Q9C0A6 1442 aa14.94□□□□□ -0.02
MACF1-222ENST00000494012 SYNMO15061 1565 aa14.93□□□□□ -0.02
MACF1-222ENST00000494012 KDM5AP29375 1690 aaKnown RBP14.93□□□□□ -0.02
MACF1-222ENST00000494012 SPHKAPQ2M3C7 1700 aa14.92□□□□□ -0.02
MACF1-222ENST00000494012 UGGT1Q9NYU2 1555 aa14.92□□□□□ -0.02
MACF1-222ENST00000494012 NOS1P29475 1434 aa14.92□□□□□ -0.02
MACF1-222ENST00000494012 TRIM52Q96A61 297 aa14.91□□□□□ -0.02
MACF1-222ENST00000494012 UBR1Q8IWV7 1749 aa14.91□□□□□ -0.02
MACF1-222ENST00000494012 HSPA2P54652 639 aa14.9□□□□□ -0.02
MACF1-222ENST00000494012 PIK3C2BO00750 1634 aa14.9□□□□□ -0.02
MACF1-222ENST00000494012 PLA2R1Q13018 1463 aa14.89□□□□□ -0.03
MACF1-222ENST00000494012 POLR1AO95602 1720 aaPredicted RBP14.89□□□□□ -0.03
MACF1-222ENST00000494012 RAB3GAP2Q9H2M9 1393 aa14.89□□□□□ -0.03
MACF1-222ENST00000494012 STRCQ7RTU9 1775 aa14.88□□□□□ -0.03
MACF1-222ENST00000494012 ADGRB3O60242 1522 aa14.87□□□□□ -0.03
MACF1-222ENST00000494012 SLC52A1Q9NWF4 448 aa14.86□□□□□ -0.03
MACF1-222ENST00000494012 TRPM2O94759 1503 aa14.86□□□□□ -0.03
MACF1-222ENST00000494012 THEMISQ8N1K5 641 aaPredicted RBP14.85□□□□□ -0.03
MACF1-222ENST00000494012 SLC4A1APQ9BWU0 796 aaKnown RBP14.85□□□□□ -0.03
MACF1-222ENST00000494012 PTPRTO14522 1441 aa14.83□□□□□ -0.03
MACF1-222ENST00000494012 HRCP23327 699 aa14.83□□□□□ -0.04
MACF1-222ENST00000494012 TRIM26Q12899 539 aaPredicted RBP14.83□□□□□ -0.04
MACF1-222ENST00000494012 MYO5BQ9ULV0 1848 aa14.82□□□□□ -0.04
MACF1-222ENST00000494012 TMEM131LA2VDJ0 1609 aa14.82□□□□□ -0.04
MACF1-222ENST00000494012 PKD2Q13563 968 aa14.82□□□□□ -0.04
MACF1-222ENST00000494012 STAG3Q9UJ98 1225 aa14.82□□□□□ -0.04
MACF1-222ENST00000494012 SLIT1O75093 1534 aa14.82□□□□□ -0.04
MACF1-222ENST00000494012 KIF1BO60333 1816 aa14.81□□□□□ -0.04
MACF1-222ENST00000494012 IDI1Q13907 227 aa14.81□□□□□ -0.04
MACF1-222ENST00000494012 DMRT2Q9Y5R5 561 aa14.81□□□□□ -0.04
MACF1-222ENST00000494012 CLTCL1P53675 1640 aa14.81□□□□□ -0.04
MACF1-222ENST00000494012 MPHOSPH9Q99550 1183 aa14.8□□□□□ -0.04
MACF1-222ENST00000494012 NEURL4Q96JN8 1562 aa14.79□□□□□ -0.04
MACF1-222ENST00000494012 ARHGAP23Q9P227 1491 aa14.79□□□□□ -0.04
MACF1-222ENST00000494012 IQGAP1P46940 1657 aa14.78□□□□□ -0.04
MACF1-222ENST00000494012 SCAF11Q99590 1463 aaKnown RBP14.77□□□□□ -0.04
MACF1-222ENST00000494012 TMEM2Q9UHN6 1383 aa14.77□□□□□ -0.04
MACF1-222ENST00000494012 ANKLE2Q86XL3 938 aa14.77□□□□□ -0.05
MACF1-222ENST00000494012 MED14O60244 1454 aa14.76□□□□□ -0.05
MACF1-222ENST00000494012 NCKAP5LQ9HCH0 1330 aa14.75□□□□□ -0.05
MACF1-222ENST00000494012 EID1Q9Y6B2 187 aa14.75□□□□□ -0.05
MACF1-222ENST00000494012 CCDC144AA2RUR9 1427 aa14.75□□□□□ -0.05
MACF1-222ENST00000494012 NPHP4O75161 1426 aaPredicted RBP14.74□□□□□ -0.05
MACF1-222ENST00000494012 CHGAP10645 457 aaKnown RBP14.73□□□□□ -0.05
MACF1-222ENST00000494012 HDGFP51858 240 aaKnown RBP14.72□□□□□ -0.05
MACF1-222ENST00000494012 FOXD1Q16676 465 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms