RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 SYCP2Q9BX26 1530 aa11.74□□□□□ -0.53
CAB39-206ENST00000493540 CLTCQ00610 1675 aaKnown RBP11.73□□□□□ -0.53
CAB39-206ENST00000493540 CLEC11AQ9Y240 323 aa11.73□□□□□ -0.53
CAB39-206ENST00000493540 TRAPPC8Q9Y2L5 1435 aa11.73□□□□□ -0.53
CAB39-206ENST00000493540 LTBP4Q8N2S1 1624 aa11.72□□□□□ -0.53
CAB39-206ENST00000493540 TIAM1Q13009 1591 aa11.72□□□□□ -0.53
CAB39-206ENST00000493540 ATP7AQ04656 1500 aa11.72□□□□□ -0.53
CAB39-206ENST00000493540 POLR1AO95602 1720 aaPredicted RBP11.71□□□□□ -0.54
CAB39-206ENST00000493540 ARID4BQ4LE39 1312 aaPredicted RBP11.7□□□□□ -0.54
CAB39-206ENST00000493540 EFCAB2Q5VUJ9 269 aa11.7□□□□□ -0.54
CAB39-206ENST00000493540 GPATCH8Q9UKJ3 1502 aaKnown RBP11.7□□□□□ -0.54
CAB39-206ENST00000493540 IQSEC2Q5JU85 1478 aa11.7□□□□□ -0.54
CAB39-206ENST00000493540 MIER1Q8N108 512 aa11.69□□□□□ -0.54
CAB39-206ENST00000493540 PLCD3Q8N3E9 789 aa11.68□□□□□ -0.54
CAB39-206ENST00000493540 FAM135AQ9P2D6 1515 aa11.68□□□□□ -0.54
CAB39-206ENST00000493540 PTPRTO14522 1441 aa11.68□□□□□ -0.54
CAB39-206ENST00000493540 NPATQ14207 1427 aa11.68□□□□□ -0.54
CAB39-206ENST00000493540 UHRF1BP1Q6BDS2 1440 aa11.68□□□□□ -0.54
CAB39-206ENST00000493540 CNTLNQ9NXG0 1405 aa11.68□□□□□ -0.54
CAB39-206ENST00000493540 EHBP1L1Q8N3D4 1523 aa11.67□□□□□ -0.54
CAB39-206ENST00000493540 RANGAP1P46060 587 aaPredicted RBP11.67□□□□□ -0.54
CAB39-206ENST00000493540 CDK11AQ9UQ88 783 aaPredicted RBP11.67□□□□□ -0.54
CAB39-206ENST00000493540 NCOA1Q15788 1441 aa11.67□□□□□ -0.54
CAB39-206ENST00000493540 KIAA1107Q9UPP5 1409 aa11.67□□□□□ -0.54
CAB39-206ENST00000493540 PITPNM1O00562 1244 aa11.66□□□□□ -0.54
CAB39-206ENST00000493540 PRR29P0C7W0 189 aa11.66□□□□□ -0.54
CAB39-206ENST00000493540 HSPA2P54652 639 aa11.66□□□□□ -0.54
CAB39-206ENST00000493540 IFNLR1Q8IU57 520 aaPredicted RBP11.66□□□□□ -0.54
CAB39-206ENST00000493540 CEP170BQ9Y4F5 1589 aaPredicted RBP11.66□□□□□ -0.54
CAB39-206ENST00000493540 PLEKHH2Q8IVE3 1493 aa11.65□□□□□ -0.54
CAB39-206ENST00000493540 AMER1Q5JTC6 1135 aaPredicted RBP11.65□□□□□ -0.54
CAB39-206ENST00000493540 CAMSAP1Q5T5Y3 1602 aa11.64□□□□□ -0.55
CAB39-206ENST00000493540 PLA2R1Q13018 1463 aa11.63□□□□□ -0.55
CAB39-206ENST00000493540 PLEKHG5O94827 1062 aa11.63□□□□□ -0.55
CAB39-206ENST00000493540 FXR2P51116 673 aaKnown RBP eCLIP11.63□□□□□ -0.55
CAB39-206ENST00000493540 AFAP1Q8N556 730 aa11.63□□□□□ -0.55
CAB39-206ENST00000493540 TCOF1Q13428 1488 aaKnown RBP11.63□□□□□ -0.55
CAB39-206ENST00000493540 MBD5Q9P267 1494 aa11.63□□□□□ -0.55
CAB39-206ENST00000493540 RNF17Q9BXT8 1623 aaKnown RBP11.62□□□□□ -0.55
CAB39-206ENST00000493540 ZC3H13Q5T200 1668 aaKnown RBP11.62□□□□□ -0.55
CAB39-206ENST00000493540 UBTFP17480 764 aaKnown RBP11.61□□□□□ -0.55
CAB39-206ENST00000493540 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
CAB39-206ENST00000493540 ARHGEF5Q12774 1597 aa11.61□□□□□ -0.55
CAB39-206ENST00000493540 NEURL4Q96JN8 1562 aa11.61□□□□□ -0.55
CAB39-206ENST00000493540 DNMT1P26358 1616 aaKnown RBP11.6□□□□□ -0.55
CAB39-206ENST00000493540 A2MP01023 1474 aa11.6□□□□□ -0.55
CAB39-206ENST00000493540 CERKQ8TCT0 537 aa11.6□□□□□ -0.55
CAB39-206ENST00000493540 CEP162Q5TB80 1403 aa11.6□□□□□ -0.55
CAB39-206ENST00000493540 EIF2AK4Q9P2K8 1649 aaKnown RBP11.59□□□□□ -0.55
CAB39-206ENST00000493540 CROCC2H7BZ55 1655 aa11.59□□□□□ -0.55
CAB39-206ENST00000493540 SPATA31D1Q6ZQQ2 1576 aa11.58□□□□□ -0.55
CAB39-206ENST00000493540 MAST1Q9Y2H9 1570 aa11.58□□□□□ -0.55
CAB39-206ENST00000493540 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
CAB39-206ENST00000493540 PTPRKQ15262 1439 aa11.58□□□□□ -0.56
CAB39-206ENST00000493540 CEBPAP49715 358 aaPredicted RBP11.57□□□□□ -0.56
CAB39-206ENST00000493540 MLECQ14165 292 aa11.57□□□□□ -0.56
CAB39-206ENST00000493540 RTEL1-TNFRSF6BF6WH68 1400 aa11.57□□□□□ -0.56
CAB39-206ENST00000493540 DEPDC5O75140 1603 aa11.57□□□□□ -0.56
CAB39-206ENST00000493540 MROH1Q8NDA8 1641 aa11.57□□□□□ -0.56
CAB39-206ENST00000493540 KDM5DQ9BY66 1539 aa11.56□□□□□ -0.56
CAB39-206ENST00000493540 ZBTB47Q9UFB7 747 aaPredicted RBP11.56□□□□□ -0.56
CAB39-206ENST00000493540 EVX2Q03828 476 aa11.54□□□□□ -0.56
CAB39-206ENST00000493540 CAMSAP2Q08AD1 1489 aa11.54□□□□□ -0.56
CAB39-206ENST00000493540 STRCP1A6NGW2 1772 aa11.54□□□□□ -0.56
CAB39-206ENST00000493540 A2ML1A8K2U0 1454 aa11.53□□□□□ -0.56
CAB39-206ENST00000493540 CCDC141Q6ZP82 1450 aa11.53□□□□□ -0.56
CAB39-206ENST00000493540 CEP152O94986 1710 aa11.53□□□□□ -0.56
CAB39-206ENST00000493540 PZPP20742 1482 aa11.52□□□□□ -0.56
CAB39-206ENST00000493540 SPOCK2Q92563 424 aa11.52□□□□□ -0.57
CAB39-206ENST00000493540 CREBZFQ9NS37 354 aa11.52□□□□□ -0.57
CAB39-206ENST00000493540 ALKQ9UM73 1620 aa11.52□□□□□ -0.57
CAB39-206ENST00000493540 ZMYM3Q14202 1370 aa11.52□□□□□ -0.57
CAB39-206ENST00000493540 UBR1Q8IWV7 1749 aa11.51□□□□□ -0.57
CAB39-206ENST00000493540 CCNB3Q8WWL7 1395 aa11.51□□□□□ -0.57
CAB39-206ENST00000493540 XIRP1Q702N8 1843 aaKnown RBP11.51□□□□□ -0.57
CAB39-206ENST00000493540 NCOA2Q15596 1464 aa11.51□□□□□ -0.57
CAB39-206ENST00000493540 MAP3K1Q13233 1512 aa11.5□□□□□ -0.57
CAB39-206ENST00000493540 VWDEQ8N2E2 1590 aa11.5□□□□□ -0.57
CAB39-206ENST00000493540 KDM5AP29375 1690 aaKnown RBP11.5□□□□□ -0.57
CAB39-206ENST00000493540 IQGAP1P46940 1657 aa11.5□□□□□ -0.57
CAB39-206ENST00000493540 SPAG9O60271 1321 aaKnown RBP11.5□□□□□ -0.57
CAB39-206ENST00000493540 SYNMO15061 1565 aa11.5□□□□□ -0.57
CAB39-206ENST00000493540 ATP1B4Q9UN42 357 aaPredicted RBP11.49□□□□□ -0.57
CAB39-206ENST00000493540 MTUS2Q5JR59 1369 aa11.49□□□□□ -0.57
CAB39-206ENST00000493540 PRDM15P57071 1507 aaPredicted RBP11.48□□□□□ -0.57
CAB39-206ENST00000493540 CFAP65Q6ZU64 1925 aaKnown RBP11.47□□□□□ -0.57
CAB39-206ENST00000493540 MED14O60244 1454 aa11.47□□□□□ -0.57
CAB39-206ENST00000493540 ABCC3O15438 1527 aa11.46□□□□□ -0.57
CAB39-206ENST00000493540 CPS1P31327 1500 aa11.46□□□□□ -0.57
CAB39-206ENST00000493540 DHX29Q7Z478 1369 aaKnown RBP11.46□□□□□ -0.57
CAB39-206ENST00000493540 NLRP1Q9C000 1473 aa11.45□□□□□ -0.58
CAB39-206ENST00000493540 HNRNPMP52272 730 aaKnown RBP eCLIP11.45□□□□□ -0.58
CAB39-206ENST00000493540 CFDP1Q9UEE9 299 aaPredicted RBP11.44□□□□□ -0.58
CAB39-206ENST00000493540 LRRC9Q6ZRR7 1453 aa11.44□□□□□ -0.58
CAB39-206ENST00000493540 UGGT1Q9NYU2 1555 aa11.42□□□□□ -0.58
CAB39-206ENST00000493540 ZNF644Q9H582 1327 aaPredicted RBP11.42□□□□□ -0.58
CAB39-206ENST00000493540 SHANK2Q9UPX8 1470 aa11.42□□□□□ -0.58
CAB39-206ENST00000493540 VPS8Q8N3P4 1428 aa11.42□□□□□ -0.58
CAB39-206ENST00000493540 MNX1P50219 401 aaPredicted RBP11.41□□□□□ -0.58
CAB39-206ENST00000493540 PKD2Q13563 968 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms