RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 MYT1LQ9UL68 1186 aa13.97□□□□□ -0.17
TM4SF1-203ENST00000493298 CEP152O94986 1710 aa13.97□□□□□ -0.17
TM4SF1-203ENST00000493298 KDM5DQ9BY66 1539 aa13.96□□□□□ -0.17
TM4SF1-203ENST00000493298 ZC3H13Q5T200 1668 aaKnown RBP13.96□□□□□ -0.17
TM4SF1-203ENST00000493298 DAPK1P53355 1430 aa13.96□□□□□ -0.18
TM4SF1-203ENST00000493298 ABCC3O15438 1527 aa13.95□□□□□ -0.18
TM4SF1-203ENST00000493298 PRDM15P57071 1507 aaPredicted RBP13.95□□□□□ -0.18
TM4SF1-203ENST00000493298 UHRF1BP1Q6BDS2 1440 aa13.94□□□□□ -0.18
TM4SF1-203ENST00000493298 PLPPR3Q6T4P5 718 aa13.94□□□□□ -0.18
TM4SF1-203ENST00000493298 CEP170BQ9Y4F5 1589 aaPredicted RBP13.94□□□□□ -0.18
TM4SF1-203ENST00000493298 DUOX2Q9NRD8 1548 aa13.94□□□□□ -0.18
TM4SF1-203ENST00000493298 PCGF6Q9BYE7 350 aa13.93□□□□□ -0.18
TM4SF1-203ENST00000493298 PPP6R1Q9UPN7 881 aa13.93□□□□□ -0.18
TM4SF1-203ENST00000493298 CFAP65Q6ZU64 1925 aaKnown RBP13.93□□□□□ -0.18
TM4SF1-203ENST00000493298 PZPP20742 1482 aa13.93□□□□□ -0.18
TM4SF1-203ENST00000493298 VWDEQ8N2E2 1590 aa13.92□□□□□ -0.18
TM4SF1-203ENST00000493298 CAMSAP1Q5T5Y3 1602 aa13.92□□□□□ -0.18
TM4SF1-203ENST00000493298 ADGRL2O95490 1459 aa13.92□□□□□ -0.18
TM4SF1-203ENST00000493298 NCOA1Q15788 1441 aa13.91□□□□□ -0.18
TM4SF1-203ENST00000493298 GGT6Q6P531 493 aa13.9□□□□□ -0.18
TM4SF1-203ENST00000493298 SPATA31D1Q6ZQQ2 1576 aa13.9□□□□□ -0.18
TM4SF1-203ENST00000493298 KIF3BO15066 747 aa13.89□□□□□ -0.19
TM4SF1-203ENST00000493298 ERBINQ96RT1 1412 aa13.88□□□□□ -0.19
TM4SF1-203ENST00000493298 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.87□□□□□ -0.19
TM4SF1-203ENST00000493298 KIF15Q9NS87 1388 aa13.87□□□□□ -0.19
TM4SF1-203ENST00000493298 TSPY4P0CV99 314 aa13.87□□□□□ -0.19
TM4SF1-203ENST00000493298 TSPY10P0CW01 314 aa13.87□□□□□ -0.19
TM4SF1-203ENST00000493298 NEURL4Q96JN8 1562 aa13.87□□□□□ -0.19
TM4SF1-203ENST00000493298 POLR1AO95602 1720 aaPredicted RBP13.87□□□□□ -0.19
TM4SF1-203ENST00000493298 LTBP4Q8N2S1 1624 aa13.86□□□□□ -0.19
TM4SF1-203ENST00000493298 A2ML1A8K2U0 1454 aa13.86□□□□□ -0.19
TM4SF1-203ENST00000493298 PLA2R1Q13018 1463 aa13.86□□□□□ -0.19
TM4SF1-203ENST00000493298 FBXO31Q5XUX0 539 aaPredicted RBP13.85□□□□□ -0.19
TM4SF1-203ENST00000493298 ILDR1Q86SU0 546 aaPredicted RBP13.85□□□□□ -0.19
TM4SF1-203ENST00000493298 PTPRTO14522 1441 aa13.84□□□□□ -0.19
TM4SF1-203ENST00000493298 LMTK2Q8IWU2 1503 aa13.84□□□□□ -0.19
TM4SF1-203ENST00000493298 UBR1Q8IWV7 1749 aa13.84□□□□□ -0.19
TM4SF1-203ENST00000493298 ERVK-7P63135 1459 aa13.83□□□□□ -0.2
TM4SF1-203ENST00000493298 ARHGAP31Q2M1Z3 1444 aa13.82□□□□□ -0.2
TM4SF1-203ENST00000493298 ESF1Q9H501 851 aaKnown RBP13.82□□□□□ -0.2
TM4SF1-203ENST00000493298 UNC13BO14795 1591 aa13.81□□□□□ -0.2
TM4SF1-203ENST00000493298 TNRQ92752 1358 aa13.81□□□□□ -0.2
TM4SF1-203ENST00000493298 SYNMO15061 1565 aa13.8□□□□□ -0.2
TM4SF1-203ENST00000493298 FAM50AQ14320 339 aaKnown RBP13.8□□□□□ -0.2
TM4SF1-203ENST00000493298 WASHC2CQ9Y4E1 1318 aa13.8□□□□□ -0.2
TM4SF1-203ENST00000493298 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
TM4SF1-203ENST00000493298 RRP7BPQ9NSQ0 103 aa13.79□□□□□ -0.2
TM4SF1-203ENST00000493298 EFCAB6Q5THR3 1501 aa13.79□□□□□ -0.2
TM4SF1-203ENST00000493298 KDM5AP29375 1690 aaKnown RBP13.79□□□□□ -0.2
TM4SF1-203ENST00000493298 ANKRD30AQ9BXX3 1397 aa13.78□□□□□ -0.2
TM4SF1-203ENST00000493298 STRCP1A6NGW2 1772 aa13.77□□□□□ -0.21
TM4SF1-203ENST00000493298 PIK3C2BO00750 1634 aa13.77□□□□□ -0.21
TM4SF1-203ENST00000493298 GCC2Q8IWJ2 1684 aa13.77□□□□□ -0.21
TM4SF1-203ENST00000493298 CHIC2Q9UKJ5 165 aa13.77□□□□□ -0.21
TM4SF1-203ENST00000493298 MYO5BQ9ULV0 1848 aa13.77□□□□□ -0.21
TM4SF1-203ENST00000493298 TET3O43151 1660 aa13.76□□□□□ -0.21
TM4SF1-203ENST00000493298 UGGT1Q9NYU2 1555 aa13.76□□□□□ -0.21
TM4SF1-203ENST00000493298 E9PCH4 1651 aa13.75□□□□□ -0.21
TM4SF1-203ENST00000493298 MED14O60244 1454 aa13.75□□□□□ -0.21
TM4SF1-203ENST00000493298 ROCK1Q13464 1354 aa13.75□□□□□ -0.21
TM4SF1-203ENST00000493298 IQGAP3Q86VI3 1631 aa13.75□□□□□ -0.21
TM4SF1-203ENST00000493298 NOS1P29475 1434 aa13.74□□□□□ -0.21
TM4SF1-203ENST00000493298 ANKRD50Q9ULJ7 1429 aa13.74□□□□□ -0.21
TM4SF1-203ENST00000493298 NCKAP5LQ9HCH0 1330 aa13.74□□□□□ -0.21
TM4SF1-203ENST00000493298 ITGAEP38570 1179 aa13.74□□□□□ -0.21
TM4SF1-203ENST00000493298 ARHGAP23Q9P227 1491 aa13.74□□□□□ -0.21
TM4SF1-203ENST00000493298 IQGAP1P46940 1657 aa13.73□□□□□ -0.21
TM4SF1-203ENST00000493298 FBXO41Q8TF61 875 aa13.73□□□□□ -0.21
TM4SF1-203ENST00000493298 SLIT1O75093 1534 aa13.73□□□□□ -0.21
TM4SF1-203ENST00000493298 CERKQ8TCT0 537 aa13.72□□□□□ -0.21
TM4SF1-203ENST00000493298 DMRT2Q9Y5R5 561 aa13.71□□□□□ -0.21
TM4SF1-203ENST00000493298 NAIPQ13075 1403 aa13.71□□□□□ -0.22
TM4SF1-203ENST00000493298 PKD2Q13563 968 aa13.7□□□□□ -0.22
TM4SF1-203ENST00000493298 XIRP1Q702N8 1843 aaKnown RBP13.69□□□□□ -0.22
TM4SF1-203ENST00000493298 ALKQ9UM73 1620 aa13.68□□□□□ -0.22
TM4SF1-203ENST00000493298 IQSEC2Q5JU85 1478 aa13.68□□□□□ -0.22
TM4SF1-203ENST00000493298 RPRD2Q5VT52 1461 aaKnown RBP13.68□□□□□ -0.22
TM4SF1-203ENST00000493298 ZNF335Q9H4Z2 1342 aaPredicted RBP13.67□□□□□ -0.22
TM4SF1-203ENST00000493298 HFM1A2PYH4 1435 aa13.67□□□□□ -0.22
TM4SF1-203ENST00000493298 TMEM131LA2VDJ0 1609 aa13.67□□□□□ -0.22
TM4SF1-203ENST00000493298 ADGRB3O60242 1522 aa13.66□□□□□ -0.22
TM4SF1-203ENST00000493298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.65□□□□□ -0.22
TM4SF1-203ENST00000493298 SETD5Q9C0A6 1442 aa13.64□□□□□ -0.23
TM4SF1-203ENST00000493298 RAB3GAP2Q9H2M9 1393 aa13.64□□□□□ -0.23
TM4SF1-203ENST00000493298 NPHP4O75161 1426 aaPredicted RBP13.64□□□□□ -0.23
TM4SF1-203ENST00000493298 SCAF11Q99590 1463 aaKnown RBP13.63□□□□□ -0.23
TM4SF1-203ENST00000493298 KANK1Q14678 1352 aa13.63□□□□□ -0.23
TM4SF1-203ENST00000493298 LTKP29376 864 aa13.63□□□□□ -0.23
TM4SF1-203ENST00000493298 THEMISQ8N1K5 641 aaPredicted RBP13.63□□□□□ -0.23
TM4SF1-203ENST00000493298 SPHKAPQ2M3C7 1700 aa13.63□□□□□ -0.23
TM4SF1-203ENST00000493298 IDI1Q13907 227 aa13.62□□□□□ -0.23
TM4SF1-203ENST00000493298 ZFYVE9O95405 1425 aa13.61□□□□□ -0.23
TM4SF1-203ENST00000493298 TMEM2Q9UHN6 1383 aa13.6□□□□□ -0.23
TM4SF1-203ENST00000493298 CPS1P31327 1500 aa13.59□□□□□ -0.23
TM4SF1-203ENST00000493298 ANKLE2Q86XL3 938 aa13.59□□□□□ -0.23
TM4SF1-203ENST00000493298 HRCP23327 699 aa13.58□□□□□ -0.24
TM4SF1-203ENST00000493298 DHX57Q6P158 1386 aaKnown RBP13.58□□□□□ -0.24
TM4SF1-203ENST00000493298 CHD2O14647 1828 aaKnown RBP13.57□□□□□ -0.24
TM4SF1-203ENST00000493298 LRRC7Q96NW7 1537 aa13.56□□□□□ -0.24
TM4SF1-203ENST00000493298 NWD1Q149M9 1564 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms