RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 RTEL1-TNFRSF6BF6WH68 1400 aa11.81□□□□□ -0.52
FDPS-218ENST00000492887 HRCP23327 699 aa11.81□□□□□ -0.52
FDPS-218ENST00000492887 CEP152O94986 1710 aa11.8□□□□□ -0.52
FDPS-218ENST00000492887 CFAP65Q6ZU64 1925 aaKnown RBP11.8□□□□□ -0.52
FDPS-218ENST00000492887 ERBINQ96RT1 1412 aa11.79□□□□□ -0.52
FDPS-218ENST00000492887 PPP4R3CPQ6ZMV5 832 aa11.79□□□□□ -0.52
FDPS-218ENST00000492887 ACIN1Q9UKV3 1341 aaKnown RBP11.79□□□□□ -0.52
FDPS-218ENST00000492887 DIP2CQ9Y2E4 1556 aa11.79□□□□□ -0.52
FDPS-218ENST00000492887 ZMYM4Q5VZL5 1548 aa11.78□□□□□ -0.52
FDPS-218ENST00000492887 RNF39Q9H2S5 420 aa11.78□□□□□ -0.52
FDPS-218ENST00000492887 IQGAP3Q86VI3 1631 aa11.78□□□□□ -0.52
FDPS-218ENST00000492887 MLH3Q9UHC1 1453 aa11.76□□□□□ -0.53
FDPS-218ENST00000492887 DEPDC5O75140 1603 aa11.76□□□□□ -0.53
FDPS-218ENST00000492887 RAPGEF3O95398 923 aa11.76□□□□□ -0.53
FDPS-218ENST00000492887 A2MP01023 1474 aa11.76□□□□□ -0.53
FDPS-218ENST00000492887 KDM5DQ9BY66 1539 aa11.76□□□□□ -0.53
FDPS-218ENST00000492887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.75□□□□□ -0.535e-17■■□□□ 11.6
FDPS-218ENST00000492887 NUP155O75694 1391 aa11.74□□□□□ -0.53
FDPS-218ENST00000492887 ARHGEF40Q8TER5 1519 aa11.74□□□□□ -0.53
FDPS-218ENST00000492887 FAM135AQ9P2D6 1515 aa11.74□□□□□ -0.53
FDPS-218ENST00000492887 RNF17Q9BXT8 1623 aaKnown RBP11.74□□□□□ -0.53
FDPS-218ENST00000492887 BCORL1Q5H9F3 1711 aa11.74□□□□□ -0.53
FDPS-218ENST00000492887 TET3O43151 1660 aa11.73□□□□□ -0.53
FDPS-218ENST00000492887 SLC4A1APQ9BWU0 796 aaKnown RBP11.73□□□□□ -0.53
FDPS-218ENST00000492887 CLSPNQ9HAW4 1339 aa11.73□□□□□ -0.53
FDPS-218ENST00000492887 SPHKAPQ2M3C7 1700 aa11.72□□□□□ -0.53
FDPS-218ENST00000492887 PZPP20742 1482 aa11.72□□□□□ -0.53
FDPS-218ENST00000492887 CNKSR2Q8WXI2 1034 aa11.72□□□□□ -0.53
FDPS-218ENST00000492887 KANK1Q14678 1352 aa11.71□□□□□ -0.53
FDPS-218ENST00000492887 MPHOSPH9Q99550 1183 aa11.71□□□□□ -0.53
FDPS-218ENST00000492887 E9PCH4 1651 aa11.71□□□□□ -0.54
FDPS-218ENST00000492887 ZC3H13Q5T200 1668 aaKnown RBP11.71□□□□□ -0.54
FDPS-218ENST00000492887 PRDM15P57071 1507 aaPredicted RBP11.7□□□□□ -0.54
FDPS-218ENST00000492887 MAGI2Q86UL8 1455 aa11.7□□□□□ -0.54
FDPS-218ENST00000492887 YEATS2Q9ULM3 1422 aa11.7□□□□□ -0.54
FDPS-218ENST00000492887 DHX29Q7Z478 1369 aaKnown RBP11.7□□□□□ -0.54
FDPS-218ENST00000492887 KIF3BO15066 747 aa11.7□□□□□ -0.54
FDPS-218ENST00000492887 C1QBPQ07021 282 aaKnown RBP11.7□□□□□ -0.54
FDPS-218ENST00000492887 NEUROD1Q13562 356 aa11.7□□□□□ -0.54
FDPS-218ENST00000492887 MROH1Q8NDA8 1641 aa11.69□□□□□ -0.54
FDPS-218ENST00000492887 CAMSAP1Q5T5Y3 1602 aa11.68□□□□□ -0.54
FDPS-218ENST00000492887 RNF216Q9NWF9 866 aaPredicted RBP11.68□□□□□ -0.54
FDPS-218ENST00000492887 KIF1BO60333 1816 aa11.67□□□□□ -0.54
FDPS-218ENST00000492887 ATP10AO60312 1499 aa11.67□□□□□ -0.54
FDPS-218ENST00000492887 CLTCQ00610 1675 aaKnown RBP11.67□□□□□ -0.54
FDPS-218ENST00000492887 REREQ9P2R6 1566 aa11.67□□□□□ -0.54
FDPS-218ENST00000492887 SIGLEC1Q9BZZ2 1709 aa11.66□□□□□ -0.54
FDPS-218ENST00000492887 PKD2Q13563 968 aa11.66□□□□□ -0.54
FDPS-218ENST00000492887 TONSLQ96HA7 1378 aa11.66□□□□□ -0.54
FDPS-218ENST00000492887 COL17A1Q9UMD9 1497 aaPredicted RBP11.65□□□□□ -0.54
FDPS-218ENST00000492887 GGT6Q6P531 493 aa11.65□□□□□ -0.54
FDPS-218ENST00000492887 SIN3AQ96ST3 1273 aa11.65□□□□□ -0.54
FDPS-218ENST00000492887 FER1L4A9Z1Z3 1794 aa11.64□□□□□ -0.55
FDPS-218ENST00000492887 VWDEQ8N2E2 1590 aa11.63□□□□□ -0.55
FDPS-218ENST00000492887 EFCAB6Q5THR3 1501 aa11.63□□□□□ -0.55
FDPS-218ENST00000492887 ARID4BQ4LE39 1312 aaPredicted RBP11.61□□□□□ -0.55
FDPS-218ENST00000492887 ABCC3O15438 1527 aa11.6□□□□□ -0.55
FDPS-218ENST00000492887 AGLP35573 1532 aa11.6□□□□□ -0.55
FDPS-218ENST00000492887 PREX1Q8TCU6 1659 aa11.6□□□□□ -0.55
FDPS-218ENST00000492887 MLECQ14165 292 aa11.6□□□□□ -0.55
FDPS-218ENST00000492887 ANKRD30BQ9BXX2 1392 aa11.59□□□□□ -0.55
FDPS-218ENST00000492887 MYO5BQ9ULV0 1848 aa11.59□□□□□ -0.55
FDPS-218ENST00000492887 LMTK2Q8IWU2 1503 aa11.59□□□□□ -0.55
FDPS-218ENST00000492887 CCDC144AA2RUR9 1427 aa11.59□□□□□ -0.55
FDPS-218ENST00000492887 WASHC2CQ9Y4E1 1318 aa11.59□□□□□ -0.55
FDPS-218ENST00000492887 RPRD2Q5VT52 1461 aaKnown RBP11.58□□□□□ -0.56
FDPS-218ENST00000492887 CLTCL1P53675 1640 aa11.58□□□□□ -0.56
FDPS-218ENST00000492887 ESF1Q9H501 851 aaKnown RBP11.58□□□□□ -0.56
FDPS-218ENST00000492887 TRPM2O94759 1503 aa11.58□□□□□ -0.56
FDPS-218ENST00000492887 MROH2AA6NES4 1674 aa11.57□□□□□ -0.56
FDPS-218ENST00000492887 RIMS1Q86UR5 1692 aaKnown RBP11.55□□□□□ -0.56
FDPS-218ENST00000492887 UGGT1Q9NYU2 1555 aa11.53□□□□□ -0.56
FDPS-218ENST00000492887 IFT172Q9UG01 1749 aa11.52□□□□□ -0.56
FDPS-218ENST00000492887 TIMELESSQ9UNS1 1208 aa11.52□□□□□ -0.57
FDPS-218ENST00000492887 C3P01024 1663 aa11.52□□□□□ -0.57
FDPS-218ENST00000492887 NPATQ14207 1427 aa11.52□□□□□ -0.57
FDPS-218ENST00000492887 SYNMO15061 1565 aa11.5□□□□□ -0.57
FDPS-218ENST00000492887 PPLO60437 1756 aa11.5□□□□□ -0.57
FDPS-218ENST00000492887 CHGAP10645 457 aaKnown RBP11.5□□□□□ -0.57
FDPS-218ENST00000492887 ZNF326Q5BKZ1 582 aaKnown RBP11.5□□□□□ -0.57
FDPS-218ENST00000492887 MADDQ8WXG6 1647 aa11.49□□□□□ -0.57
FDPS-218ENST00000492887 CNTLNQ9NXG0 1405 aa11.49□□□□□ -0.57
FDPS-218ENST00000492887 PLA2R1Q13018 1463 aa11.49□□□□□ -0.57
FDPS-218ENST00000492887 PIK3C2BO00750 1634 aa11.49□□□□□ -0.57
FDPS-218ENST00000492887 RGL3Q3MIN7 710 aa11.48□□□□□ -0.57
FDPS-218ENST00000492887 PTPRTO14522 1441 aa11.48□□□□□ -0.57
FDPS-218ENST00000492887 ERVK-7P63135 1459 aa11.47□□□□□ -0.57
FDPS-218ENST00000492887 ARHGAP31Q2M1Z3 1444 aa11.47□□□□□ -0.57
FDPS-218ENST00000492887 L3MBTL2Q969R5 705 aa11.47□□□□□ -0.57
FDPS-218ENST00000492887 ADGRB3O60242 1522 aa11.46□□□□□ -0.57
FDPS-218ENST00000492887 KDM2AQ9Y2K7 1162 aa11.46□□□□□ -0.57
FDPS-218ENST00000492887 TRPM1Q7Z4N2 1603 aa11.46□□□□□ -0.58
FDPS-218ENST00000492887 SPATA31D1Q6ZQQ2 1576 aa11.45□□□□□ -0.58
FDPS-218ENST00000492887 PPP1R15AO75807 674 aaPredicted RBP11.45□□□□□ -0.58
FDPS-218ENST00000492887 DCAF11Q8TEB1 546 aa11.44□□□□□ -0.58
FDPS-218ENST00000492887 NEURL4Q96JN8 1562 aa11.44□□□□□ -0.58
FDPS-218ENST00000492887 NOS1P29475 1434 aa11.43□□□□□ -0.58
FDPS-218ENST00000492887 ADAMTSL3P82987 1691 aa11.43□□□□□ -0.58
FDPS-218ENST00000492887 STAG3Q9UJ98 1225 aa11.43□□□□□ -0.58
FDPS-218ENST00000492887 POLR1AO95602 1720 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms