RNA–Protein interactions for RNA: ENST00000492472.1

RBM5-223, Transcript of RNA binding motif protein 5, human

TSL 2

Gene RBM5, Length 902 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM5-223	ENST00000492472	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.59	□□□□□ -0.23
RBM5-223	ENST00000492472	CNTLN	Q9NXG0	1405 aa		13.58	□□□□□ -0.24
RBM5-223	ENST00000492472	TIAM1	Q13009	1591 aa		13.58	□□□□□ -0.24
RBM5-223	ENST00000492472	C3	P01024	1663 aa		13.57	□□□□□ -0.24
RBM5-223	ENST00000492472	INO80	Q9ULG1	1556 aa	Predicted RBP	13.57	□□□□□ -0.24
RBM5-223	ENST00000492472	ADGB	Q8N7X0	1667 aa		13.56	□□□□□ -0.24
RBM5-223	ENST00000492472	UHRF1BP1	Q6BDS2	1440 aa		13.56	□□□□□ -0.24
RBM5-223	ENST00000492472	MROH2A	A6NES4	1674 aa		13.56	□□□□□ -0.24
RBM5-223	ENST00000492472	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
RBM5-223	ENST00000492472	HSPA2	P54652	639 aa		13.55	□□□□□ -0.24
RBM5-223	ENST00000492472	SSUH2	Q9Y2M2	353 aa		13.54	□□□□□ -0.24
RBM5-223	ENST00000492472	CEBPA	P49715	358 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM5-223	ENST00000492472	FBXO41	Q8TF61	875 aa		13.53	□□□□□ -0.24
RBM5-223	ENST00000492472	AKT1S1	Q96B36	256 aa		13.52	□□□□□ -0.25
RBM5-223	ENST00000492472	A2M	P01023	1474 aa		13.52	□□□□□ -0.25
RBM5-223	ENST00000492472	PLXNC1	O60486	1568 aa		13.52	□□□□□ -0.25
RBM5-223	ENST00000492472	VPS8	Q8N3P4	1428 aa		13.51	□□□□□ -0.25
RBM5-223	ENST00000492472	NCOA2	Q15596	1464 aa		13.5	□□□□□ -0.25
RBM5-223	ENST00000492472	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.49	□□□□□ -0.25
RBM5-223	ENST00000492472	RSPH4A	Q5TD94	716 aa		13.49	□□□□□ -0.25
RBM5-223	ENST00000492472	CLTC	Q00610	1675 aa	Known RBP	13.49	□□□□□ -0.25
RBM5-223	ENST00000492472	CCDC141	Q6ZP82	1450 aa		13.48	□□□□□ -0.25
RBM5-223	ENST00000492472	NPAT	Q14207	1427 aa		13.48	□□□□□ -0.25
RBM5-223	ENST00000492472	CAMSAP2	Q08AD1	1489 aa		13.48	□□□□□ -0.25
RBM5-223	ENST00000492472	MBD5	Q9P267	1494 aa		13.48	□□□□□ -0.25
RBM5-223	ENST00000492472	STRC	Q7RTU9	1775 aa		13.47	□□□□□ -0.25
RBM5-223	ENST00000492472	LRRC9	Q6ZRR7	1453 aa		13.46	□□□□□ -0.25
RBM5-223	ENST00000492472	ZNF644	Q9H582	1327 aa	Predicted RBP	13.45	□□□□□ -0.26
RBM5-223	ENST00000492472	MAP3K1	Q13233	1512 aa		13.45	□□□□□ -0.26
RBM5-223	ENST00000492472	ARHGEF5	Q12774	1597 aa		13.45	□□□□□ -0.26
RBM5-223	ENST00000492472	ZMYM3	Q14202	1370 aa		13.45	□□□□□ -0.26
RBM5-223	ENST00000492472	GGT6	Q6P531	493 aa		13.44	□□□□□ -0.26
RBM5-223	ENST00000492472	FAM135A	Q9P2D6	1515 aa		13.44	□□□□□ -0.26
RBM5-223	ENST00000492472	LOC105371045	A0A1W2PR82	267 aa		13.43	□□□□□ -0.26
RBM5-223	ENST00000492472	TSPY4	P0CV99	314 aa		13.43	□□□□□ -0.26
RBM5-223	ENST00000492472	TSPY10	P0CW01	314 aa		13.43	□□□□□ -0.26
RBM5-223	ENST00000492472	ZNF142	P52746	1687 aa	Predicted RBP	13.43	□□□□□ -0.26
RBM5-223	ENST00000492472	DHX29	Q7Z478	1369 aa	Known RBP	13.43	□□□□□ -0.26
RBM5-223	ENST00000492472	MYO3A	Q8NEV4	1616 aa		13.42	□□□□□ -0.26
RBM5-223	ENST00000492472	PTPRT	O14522	1441 aa		13.41	□□□□□ -0.26
RBM5-223	ENST00000492472	CERK	Q8TCT0	537 aa		13.41	□□□□□ -0.26
RBM5-223	ENST00000492472	NCOA1	Q15788	1441 aa		13.39	□□□□□ -0.27
RBM5-223	ENST00000492472	KDM5D	Q9BY66	1539 aa		13.39	□□□□□ -0.27
RBM5-223	ENST00000492472	CAMSAP1	Q5T5Y3	1602 aa		13.39	□□□□□ -0.27
RBM5-223	ENST00000492472	PROM2	Q8N271	834 aa		13.39	□□□□□ -0.27
RBM5-223	ENST00000492472	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.39	□□□□□ -0.27
RBM5-223	ENST00000492472	MIA2	Q96PC5	1412 aa		13.39	□□□□□ -0.27
RBM5-223	ENST00000492472	MAST1	Q9Y2H9	1570 aa		13.38	□□□□□ -0.27
RBM5-223	ENST00000492472	KIF3B	O15066	747 aa		13.38	□□□□□ -0.27
RBM5-223	ENST00000492472	REM2	Q8IYK8	340 aa	Predicted RBP	13.38	□□□□□ -0.27
RBM5-223	ENST00000492472	PTPRK	Q15262	1439 aa		13.38	□□□□□ -0.27
RBM5-223	ENST00000492472	MYOM3	Q5VTT5	1437 aa		13.37	□□□□□ -0.27
RBM5-223	ENST00000492472	PLA2R1	Q13018	1463 aa		13.36	□□□□□ -0.27
RBM5-223	ENST00000492472	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.36	□□□□□ -0.27
RBM5-223	ENST00000492472	ZC3H13	Q5T200	1668 aa	Known RBP	13.36	□□□□□ -0.27
RBM5-223	ENST00000492472	WASHC2C	Q9Y4E1	1318 aa		13.35	□□□□□ -0.27
RBM5-223	ENST00000492472	PKD2	Q13563	968 aa		13.34	□□□□□ -0.27
RBM5-223	ENST00000492472	PZP	P20742	1482 aa		13.34	□□□□□ -0.27
RBM5-223	ENST00000492472	RNF17	Q9BXT8	1623 aa	Known RBP	13.33	□□□□□ -0.28
RBM5-223	ENST00000492472	A2ML1	A8K2U0	1454 aa		13.33	□□□□□ -0.28
RBM5-223	ENST00000492472	CROCC2	H7BZ55	1655 aa		13.32	□□□□□ -0.28
RBM5-223	ENST00000492472	IQSEC2	Q5JU85	1478 aa		13.32	□□□□□ -0.28
RBM5-223	ENST00000492472	KANK4	Q5T7N3	995 aa	Predicted RBP	13.32	□□□□□ -0.28
RBM5-223	ENST00000492472	POLR1A	O95602	1720 aa	Predicted RBP	13.32	□□□□□ -0.28
RBM5-223	ENST00000492472	DNMT1	P26358	1616 aa	Known RBP	13.31	□□□□□ -0.28
RBM5-223	ENST00000492472	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.31	□□□□□ -0.28
RBM5-223	ENST00000492472	CLEC11A	Q9Y240	323 aa		13.31	□□□□□ -0.28
RBM5-223	ENST00000492472	PTPN23	Q9H3S7	1636 aa		13.31	□□□□□ -0.28
RBM5-223	ENST00000492472	TNR	Q92752	1358 aa		13.31	□□□□□ -0.28
RBM5-223	ENST00000492472	TCOF1	Q13428	1488 aa	Known RBP	13.3	□□□□□ -0.28
RBM5-223	ENST00000492472	DUOX2	Q9NRD8	1548 aa		13.3	□□□□□ -0.28
RBM5-223	ENST00000492472	FBXO3	Q9UK99	471 aa		13.3	□□□□□ -0.28
RBM5-223	ENST00000492472	SHANK2	Q9UPX8	1470 aa		13.29	□□□□□ -0.28
RBM5-223	ENST00000492472	STAG3	Q9UJ98	1225 aa		13.29	□□□□□ -0.28
RBM5-223	ENST00000492472	NLRP1	Q9C000	1473 aa		13.29	□□□□□ -0.28
RBM5-223	ENST00000492472	LTBP4	Q8N2S1	1624 aa		13.28	□□□□□ -0.28
RBM5-223	ENST00000492472	NCKAP5L	Q9HCH0	1330 aa		13.28	□□□□□ -0.28
RBM5-223	ENST00000492472	ABCC3	O15438	1527 aa		13.27	□□□□□ -0.29
RBM5-223	ENST00000492472	CEP152	O94986	1710 aa		13.26	□□□□□ -0.29
RBM5-223	ENST00000492472	ERBIN	Q96RT1	1412 aa		13.26	□□□□□ -0.29
RBM5-223	ENST00000492472	UGGT1	Q9NYU2	1555 aa		13.26	□□□□□ -0.29
RBM5-223	ENST00000492472	FGD6	Q6ZV73	1430 aa		13.25	□□□□□ -0.29
RBM5-223	ENST00000492472	KIF15	Q9NS87	1388 aa		13.25	□□□□□ -0.29
RBM5-223	ENST00000492472	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.25	□□□□□ -0.29
RBM5-223	ENST00000492472	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.24	□□□□□ -0.29
RBM5-223	ENST00000492472	MROH1	Q8NDA8	1641 aa		13.24	□□□□□ -0.29
RBM5-223	ENST00000492472	SPATA31D1	Q6ZQQ2	1576 aa		13.24	□□□□□ -0.29
RBM5-223	ENST00000492472	PRDM15	P57071	1507 aa	Predicted RBP	13.23	□□□□□ -0.29
RBM5-223	ENST00000492472	DAPK1	P53355	1430 aa		13.23	□□□□□ -0.29
RBM5-223	ENST00000492472	CFAP65	Q6ZU64	1925 aa	Known RBP	13.23	□□□□□ -0.29
RBM5-223	ENST00000492472	ABCC5	O15440	1437 aa		13.22	□□□□□ -0.29
RBM5-223	ENST00000492472	DEPDC5	O75140	1603 aa		13.22	□□□□□ -0.29
RBM5-223	ENST00000492472	PITPNM1	O00562	1244 aa		13.22	□□□□□ -0.29
RBM5-223	ENST00000492472	ANKLE2	Q86XL3	938 aa		13.22	□□□□□ -0.29
RBM5-223	ENST00000492472	KANK1	Q14678	1352 aa		13.21	□□□□□ -0.29
RBM5-223	ENST00000492472	ANKRD30A	Q9BXX3	1397 aa		13.21	□□□□□ -0.29
RBM5-223	ENST00000492472	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.21	□□□□□ -0.29
RBM5-223	ENST00000492472	ERVK-7	P63135	1459 aa		13.21	□□□□□ -0.3
RBM5-223	ENST00000492472	NEURL4	Q96JN8	1562 aa		13.2	□□□□□ -0.3
RBM5-223	ENST00000492472	RRP7BP	Q9NSQ0	103 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms