RNA–Protein interactions for RNA: ENST00000491896.1

C3orf49-202, Transcript of chromosome 3 open reading frame 49, humanhuman

TSL 2

Gene C3orf49, Length 736 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-202ENST00000491896 ADGRL2O95490 1459 aa18.54■□□□□ 0.56
C3orf49-202ENST00000491896 ERBINQ96RT1 1412 aa18.53■□□□□ 0.56
C3orf49-202ENST00000491896 ZC3H13Q5T200 1668 aaKnown RBP18.52■□□□□ 0.56
C3orf49-202ENST00000491896 KDM5DQ9BY66 1539 aa18.5■□□□□ 0.55
C3orf49-202ENST00000491896 C3P01024 1663 aa18.49■□□□□ 0.55
C3orf49-202ENST00000491896 NPATQ14207 1427 aa18.49■□□□□ 0.55
C3orf49-202ENST00000491896 PREX1Q8TCU6 1659 aa18.48■□□□□ 0.55
C3orf49-202ENST00000491896 PRDM15P57071 1507 aaPredicted RBP18.48■□□□□ 0.55
C3orf49-202ENST00000491896 ANKRD30AQ9BXX3 1397 aa18.47■□□□□ 0.55
C3orf49-202ENST00000491896 KIF15Q9NS87 1388 aa18.47■□□□□ 0.55
C3orf49-202ENST00000491896 DEPDC5O75140 1603 aa18.47■□□□□ 0.55
C3orf49-202ENST00000491896 RRBP1Q9P2E9 1410 aaKnown RBP18.47■□□□□ 0.55
C3orf49-202ENST00000491896 ESF1Q9H501 851 aaKnown RBP18.46■□□□□ 0.55
C3orf49-202ENST00000491896 SETD1BQ9UPS6 1966 aaKnown RBP18.45■□□□□ 0.54
C3orf49-202ENST00000491896 MLECQ14165 292 aa18.45■□□□□ 0.54
C3orf49-202ENST00000491896 NCOA1Q15788 1441 aa18.45■□□□□ 0.54
C3orf49-202ENST00000491896 LMTK3Q96Q04 1460 aa18.45■□□□□ 0.54
C3orf49-202ENST00000491896 CLTCQ00610 1675 aaKnown RBP18.44■□□□□ 0.54
C3orf49-202ENST00000491896 ROCK1Q13464 1354 aa18.44■□□□□ 0.54
C3orf49-202ENST00000491896 MROH1Q8NDA8 1641 aa18.44■□□□□ 0.54
C3orf49-202ENST00000491896 CNKSR2Q8WXI2 1034 aa18.41■□□□□ 0.54
C3orf49-202ENST00000491896 PZPP20742 1482 aa18.39■□□□□ 0.54
C3orf49-202ENST00000491896 ZNF142P52746 1687 aaPredicted RBP18.39■□□□□ 0.53
C3orf49-202ENST00000491896 ZMYM3Q14202 1370 aa18.39■□□□□ 0.53
C3orf49-202ENST00000491896 UHRF1BP1Q6BDS2 1440 aa18.39■□□□□ 0.53
C3orf49-202ENST00000491896 ABCC3O15438 1527 aa18.39■□□□□ 0.53
C3orf49-202ENST00000491896 KIF3BO15066 747 aa18.38■□□□□ 0.53
C3orf49-202ENST00000491896 FAM50AQ14320 339 aaKnown RBP18.37■□□□□ 0.53
C3orf49-202ENST00000491896 VWDEQ8N2E2 1590 aa18.37■□□□□ 0.53
C3orf49-202ENST00000491896 LMTK2Q8IWU2 1503 aa18.36■□□□□ 0.53
C3orf49-202ENST00000491896 PTPRKQ15262 1439 aa18.35■□□□□ 0.53
C3orf49-202ENST00000491896 GGT6Q6P531 493 aa18.35■□□□□ 0.53
C3orf49-202ENST00000491896 ARHGAP31Q2M1Z3 1444 aa18.34■□□□□ 0.53
C3orf49-202ENST00000491896 ANKRD50Q9ULJ7 1429 aa18.34■□□□□ 0.53
C3orf49-202ENST00000491896 CAMSAP1Q5T5Y3 1602 aa18.34■□□□□ 0.53
C3orf49-202ENST00000491896 MYO3AQ8NEV4 1616 aa18.34■□□□□ 0.53
C3orf49-202ENST00000491896 UNC13BO14795 1591 aa18.33■□□□□ 0.52
C3orf49-202ENST00000491896 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
C3orf49-202ENST00000491896 KANK1Q14678 1352 aa18.31■□□□□ 0.52
C3orf49-202ENST00000491896 WASHC2CQ9Y4E1 1318 aa18.31■□□□□ 0.52
C3orf49-202ENST00000491896 SPATA31D1Q6ZQQ2 1576 aa18.31■□□□□ 0.52
C3orf49-202ENST00000491896 RRP7BPQ9NSQ0 103 aa18.3■□□□□ 0.52
C3orf49-202ENST00000491896 CEP152O94986 1710 aa18.29■□□□□ 0.52
C3orf49-202ENST00000491896 CEP170BQ9Y4F5 1589 aaPredicted RBP18.29■□□□□ 0.52
C3orf49-202ENST00000491896 GCC2Q8IWJ2 1684 aa18.28■□□□□ 0.52
C3orf49-202ENST00000491896 NLRP1Q9C000 1473 aa18.28■□□□□ 0.52
C3orf49-202ENST00000491896 EFCAB6Q5THR3 1501 aa18.28■□□□□ 0.52
C3orf49-202ENST00000491896 RPRD2Q5VT52 1461 aaKnown RBP18.27■□□□□ 0.52
C3orf49-202ENST00000491896 KCNA4P22459 653 aa18.27■□□□□ 0.52
C3orf49-202ENST00000491896 CEBPAP49715 358 aaPredicted RBP18.26■□□□□ 0.51
C3orf49-202ENST00000491896 PLA2R1Q13018 1463 aa18.26■□□□□ 0.51
C3orf49-202ENST00000491896 CHIC2Q9UKJ5 165 aa18.25■□□□□ 0.51
C3orf49-202ENST00000491896 A2ML1A8K2U0 1454 aa18.25■□□□□ 0.51
C3orf49-202ENST00000491896 ERVK-7P63135 1459 aa18.25■□□□□ 0.51
C3orf49-202ENST00000491896 TET3O43151 1660 aa18.25■□□□□ 0.51
C3orf49-202ENST00000491896 IQGAP3Q86VI3 1631 aa18.24■□□□□ 0.51
C3orf49-202ENST00000491896 TNRQ92752 1358 aa18.23■□□□□ 0.51
C3orf49-202ENST00000491896 HFM1A2PYH4 1435 aa18.23■□□□□ 0.51
C3orf49-202ENST00000491896 KDM5AP29375 1690 aaKnown RBP18.22■□□□□ 0.51
C3orf49-202ENST00000491896 NAIPQ13075 1403 aa18.18■□□□□ 0.5
C3orf49-202ENST00000491896 PPARGC1BQ86YN6 1023 aaKnown RBP18.18■□□□□ 0.5
C3orf49-202ENST00000491896 STRCQ7RTU9 1775 aa18.17■□□□□ 0.5
C3orf49-202ENST00000491896 ACIN1Q9UKV3 1341 aaKnown RBP18.16■□□□□ 0.5
C3orf49-202ENST00000491896 PTPRTO14522 1441 aa18.15■□□□□ 0.5
C3orf49-202ENST00000491896 NOS1P29475 1434 aa18.15■□□□□ 0.5
C3orf49-202ENST00000491896 UGGT1Q9NYU2 1555 aa18.15■□□□□ 0.5
C3orf49-202ENST00000491896 POLR1AO95602 1720 aaPredicted RBP18.12■□□□□ 0.49
C3orf49-202ENST00000491896 HSPA2P54652 639 aa18.12■□□□□ 0.49
C3orf49-202ENST00000491896 SYNMO15061 1565 aa18.12■□□□□ 0.49
C3orf49-202ENST00000491896 NPM3O75607 178 aaKnown RBP18.11■□□□□ 0.49
C3orf49-202ENST00000491896 HOXD11P31277 338 aaPredicted RBP18.11■□□□□ 0.49
C3orf49-202ENST00000491896 PKD2Q13563 968 aa18.11■□□□□ 0.49
C3orf49-202ENST00000491896 FBXO31Q5XUX0 539 aaPredicted RBP18.11■□□□□ 0.49
C3orf49-202ENST00000491896 RNF216Q9NWF9 866 aaPredicted RBP18.11■□□□□ 0.49
C3orf49-202ENST00000491896 UBR1Q8IWV7 1749 aa18.11■□□□□ 0.49
C3orf49-202ENST00000491896 E9PCH4 1651 aa18.1■□□□□ 0.49
C3orf49-202ENST00000491896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.49
C3orf49-202ENST00000491896 PIK3C2BO00750 1634 aa18.09■□□□□ 0.49
C3orf49-202ENST00000491896 ITGAEP38570 1179 aa18.09■□□□□ 0.49
C3orf49-202ENST00000491896 SLIT1O75093 1534 aa18.08■□□□□ 0.49
C3orf49-202ENST00000491896 ADGRB3O60242 1522 aa18.08■□□□□ 0.48
C3orf49-202ENST00000491896 MED14O60244 1454 aa18.07■□□□□ 0.48
C3orf49-202ENST00000491896 NUP155O75694 1391 aa18.07■□□□□ 0.48
C3orf49-202ENST00000491896 THEMISQ8N1K5 641 aaPredicted RBP18.07■□□□□ 0.48
C3orf49-202ENST00000491896 ARHGAP23Q9P227 1491 aa18.06■□□□□ 0.48
C3orf49-202ENST00000491896 NEURL4Q96JN8 1562 aa18.05■□□□□ 0.48
C3orf49-202ENST00000491896 SLC52A1Q9NWF4 448 aa18.05■□□□□ 0.48
C3orf49-202ENST00000491896 SPHKAPQ2M3C7 1700 aa18.03■□□□□ 0.48
C3orf49-202ENST00000491896 TRPM2O94759 1503 aa18.01■□□□□ 0.47
C3orf49-202ENST00000491896 CFAP65Q6ZU64 1925 aaKnown RBP18■□□□□ 0.47
C3orf49-202ENST00000491896 SCAF11Q99590 1463 aaKnown RBP18■□□□□ 0.47
C3orf49-202ENST00000491896 IQSEC2Q5JU85 1478 aa17.99■□□□□ 0.47
C3orf49-202ENST00000491896 IQGAP1P46940 1657 aa17.99■□□□□ 0.47
C3orf49-202ENST00000491896 TMEM131LA2VDJ0 1609 aa17.98■□□□□ 0.47
C3orf49-202ENST00000491896 TMEM2Q9UHN6 1383 aa17.97■□□□□ 0.47
C3orf49-202ENST00000491896 ANKLE2Q86XL3 938 aa17.97■□□□□ 0.47
C3orf49-202ENST00000491896 SETD5Q9C0A6 1442 aa17.96■□□□□ 0.47
C3orf49-202ENST00000491896 NPHP4O75161 1426 aaPredicted RBP17.95■□□□□ 0.46
C3orf49-202ENST00000491896 IDI1Q13907 227 aa17.93■□□□□ 0.46
C3orf49-202ENST00000491896 LTBP4Q8N2S1 1624 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms