RNA–Protein interactions for RNA: ENST00000491770.1

UBE2D4-211, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-211ENST00000491770 PTPRMP28827 1452 aa8.06□□□□□ -1.12
UBE2D4-211ENST00000491770 PLEKHH2Q8IVE3 1493 aa8.06□□□□□ -1.12
UBE2D4-211ENST00000491770 ECM2O94769 699 aaPredicted RBP8.06□□□□□ -1.12
UBE2D4-211ENST00000491770 YEATS2Q9ULM3 1422 aa8.05□□□□□ -1.12
UBE2D4-211ENST00000491770 ABCA6Q8N139 1617 aa8.05□□□□□ -1.12
UBE2D4-211ENST00000491770 KDM5CP41229 1560 aa8.05□□□□□ -1.12
UBE2D4-211ENST00000491770 DIP2CQ9Y2E4 1556 aa8.05□□□□□ -1.12
UBE2D4-211ENST00000491770 ATP10AO60312 1499 aa8.04□□□□□ -1.12
UBE2D4-211ENST00000491770 PREX1Q8TCU6 1659 aa8.04□□□□□ -1.12
UBE2D4-211ENST00000491770 SAMD9LQ8IVG5 1584 aa8.03□□□□□ -1.12
UBE2D4-211ENST00000491770 ATP7AQ04656 1500 aa8.03□□□□□ -1.12
UBE2D4-211ENST00000491770 ADGBQ8N7X0 1667 aa8.02□□□□□ -1.13
UBE2D4-211ENST00000491770 TIAM1Q13009 1591 aa8.02□□□□□ -1.13
UBE2D4-211ENST00000491770 RGL2O15211 777 aa8.02□□□□□ -1.13
UBE2D4-211ENST00000491770 SLC24A1O60721 1099 aa8.02□□□□□ -1.13
UBE2D4-211ENST00000491770 CFDP1Q9UEE9 299 aaPredicted RBP8.02□□□□□ -1.13
UBE2D4-211ENST00000491770 CIZ1Q9ULV3 898 aaPredicted RBP8.02□□□□□ -1.13
UBE2D4-211ENST00000491770 REREQ9P2R6 1566 aa8.01□□□□□ -1.13
UBE2D4-211ENST00000491770 SPAG9O60271 1321 aaKnown RBP8.01□□□□□ -1.13
UBE2D4-211ENST00000491770 CHADLQ6NUI6 762 aa8□□□□□ -1.13
UBE2D4-211ENST00000491770 UHRF1BP1Q6BDS2 1440 aa8□□□□□ -1.13
UBE2D4-211ENST00000491770 VPS8Q8N3P4 1428 aa8□□□□□ -1.13
UBE2D4-211ENST00000491770 INO80Q9ULG1 1556 aaPredicted RBP8□□□□□ -1.13
UBE2D4-211ENST00000491770 FXR2P51116 673 aaKnown RBP eCLIP7.99□□□□□ -1.13
UBE2D4-211ENST00000491770 RASEFQ8IZ41 740 aa7.99□□□□□ -1.13
UBE2D4-211ENST00000491770 KIDINS220Q9ULH0 1771 aa7.99□□□□□ -1.13
UBE2D4-211ENST00000491770 MLH3Q9UHC1 1453 aa7.99□□□□□ -1.13
UBE2D4-211ENST00000491770 ARHGEF12Q9NZN5 1544 aa7.98□□□□□ -1.13
UBE2D4-211ENST00000491770 SIGLEC1Q9BZZ2 1709 aa7.98□□□□□ -1.13
UBE2D4-211ENST00000491770 CNTLNQ9NXG0 1405 aa7.98□□□□□ -1.13
UBE2D4-211ENST00000491770 GSE1Q14687 1217 aa7.98□□□□□ -1.13
UBE2D4-211ENST00000491770 CAMSAP2Q08AD1 1489 aa7.98□□□□□ -1.13
UBE2D4-211ENST00000491770 NCOA2Q15596 1464 aa7.98□□□□□ -1.13
UBE2D4-211ENST00000491770 CCDC141Q6ZP82 1450 aa7.98□□□□□ -1.13
UBE2D4-211ENST00000491770 MROH2AA6NES4 1674 aa7.98□□□□□ -1.13
UBE2D4-211ENST00000491770 CLTCQ00610 1675 aaKnown RBP7.98□□□□□ -1.13
UBE2D4-211ENST00000491770 GPATCH8Q9UKJ3 1502 aaKnown RBP7.98□□□□□ -1.13
UBE2D4-211ENST00000491770 TRAPPC8Q9Y2L5 1435 aa7.97□□□□□ -1.13
UBE2D4-211ENST00000491770 AFAP1Q8N556 730 aa7.97□□□□□ -1.13
UBE2D4-211ENST00000491770 C3P01024 1663 aa7.97□□□□□ -1.13
UBE2D4-211ENST00000491770 DCAF8Q5TAQ9 597 aa7.96□□□□□ -1.14
UBE2D4-211ENST00000491770 AGLP35573 1532 aa7.96□□□□□ -1.14
UBE2D4-211ENST00000491770 A2MP01023 1474 aa7.95□□□□□ -1.14
UBE2D4-211ENST00000491770 LMTK3Q96Q04 1460 aa7.95□□□□□ -1.14
UBE2D4-211ENST00000491770 CHRDL2Q6WN34 429 aa7.95□□□□□ -1.14
UBE2D4-211ENST00000491770 RNF25Q96BH1 459 aaPredicted RBP7.95□□□□□ -1.14
UBE2D4-211ENST00000491770 PRKAR2AP13861 404 aaKnown RBP7.94□□□□□ -1.14
UBE2D4-211ENST00000491770 FARP1Q9Y4F1 1045 aaPredicted RBP7.94□□□□□ -1.14
UBE2D4-211ENST00000491770 KIAA1107Q9UPP5 1409 aa7.94□□□□□ -1.14
UBE2D4-211ENST00000491770 MYO3AQ8NEV4 1616 aa7.93□□□□□ -1.14
UBE2D4-211ENST00000491770 HNRNPMP52272 730 aaKnown RBP eCLIP7.93□□□□□ -1.14
UBE2D4-211ENST00000491770 FAM212AQ96EL1 285 aa7.93□□□□□ -1.14
UBE2D4-211ENST00000491770 LRRC9Q6ZRR7 1453 aa7.93□□□□□ -1.14
UBE2D4-211ENST00000491770 SETD1BQ9UPS6 1966 aaKnown RBP7.92□□□□□ -1.14
UBE2D4-211ENST00000491770 TSPY4P0CV99 314 aa7.92□□□□□ -1.14
UBE2D4-211ENST00000491770 TSPY10P0CW01 314 aa7.92□□□□□ -1.14
UBE2D4-211ENST00000491770 HSPA2P54652 639 aa7.92□□□□□ -1.14
UBE2D4-211ENST00000491770 GGT6Q6P531 493 aa7.92□□□□□ -1.14
UBE2D4-211ENST00000491770 ILDR1Q86SU0 546 aaPredicted RBP7.92□□□□□ -1.14
UBE2D4-211ENST00000491770 PIP4P2Q8N4L2 257 aa7.92□□□□□ -1.14
UBE2D4-211ENST00000491770 KDM5DQ9BY66 1539 aa7.92□□□□□ -1.14
UBE2D4-211ENST00000491770 PLXNC1O60486 1568 aa7.92□□□□□ -1.14
UBE2D4-211ENST00000491770 ARHGEF5Q12774 1597 aa7.92□□□□□ -1.14
UBE2D4-211ENST00000491770 CROCC2H7BZ55 1655 aa7.92□□□□□ -1.14
UBE2D4-211ENST00000491770 ZC3H13Q5T200 1668 aaKnown RBP7.92□□□□□ -1.14
UBE2D4-211ENST00000491770 CHRM1P11229 460 aaPredicted RBP7.91□□□□□ -1.14
UBE2D4-211ENST00000491770 FAM135AQ9P2D6 1515 aa7.91□□□□□ -1.14
UBE2D4-211ENST00000491770 ZNF142P52746 1687 aaPredicted RBP7.9□□□□□ -1.14
UBE2D4-211ENST00000491770 MAP3K1Q13233 1512 aa7.9□□□□□ -1.14
UBE2D4-211ENST00000491770 MYOM3Q5VTT5 1437 aa7.9□□□□□ -1.14
UBE2D4-211ENST00000491770 PLCB2Q00722 1185 aa7.9□□□□□ -1.14
UBE2D4-211ENST00000491770 PTPN23Q9H3S7 1636 aa7.89□□□□□ -1.15
UBE2D4-211ENST00000491770 EIF2AK4Q9P2K8 1649 aaKnown RBP7.89□□□□□ -1.15
UBE2D4-211ENST00000491770 LOC105371045A0A1W2PR82 267 aa7.89□□□□□ -1.15
UBE2D4-211ENST00000491770 CEBPAP49715 358 aaPredicted RBP7.89□□□□□ -1.15
UBE2D4-211ENST00000491770 CEP170BQ9Y4F5 1589 aaPredicted RBP7.88□□□□□ -1.15
UBE2D4-211ENST00000491770 RTEL1-TNFRSF6BF6WH68 1400 aa7.88□□□□□ -1.15
UBE2D4-211ENST00000491770 RSPH4AQ5TD94 716 aa7.88□□□□□ -1.15
UBE2D4-211ENST00000491770 POLR1AO95602 1720 aaPredicted RBP7.88□□□□□ -1.15
UBE2D4-211ENST00000491770 NPATQ14207 1427 aa7.87□□□□□ -1.15
UBE2D4-211ENST00000491770 CEP152O94986 1710 aa7.87□□□□□ -1.15
UBE2D4-211ENST00000491770 KIF3BO15066 747 aa7.87□□□□□ -1.15
UBE2D4-211ENST00000491770 BBXQ8WY36 941 aaPredicted RBP7.87□□□□□ -1.15
UBE2D4-211ENST00000491770 CAMSAP1Q5T5Y3 1602 aa7.87□□□□□ -1.15
UBE2D4-211ENST00000491770 MAST1Q9Y2H9 1570 aa7.87□□□□□ -1.15
UBE2D4-211ENST00000491770 MIA2Q96PC5 1412 aa7.86□□□□□ -1.15
UBE2D4-211ENST00000491770 KANK1Q14678 1352 aa7.86□□□□□ -1.15
UBE2D4-211ENST00000491770 ZNF644Q9H582 1327 aaPredicted RBP7.86□□□□□ -1.15
UBE2D4-211ENST00000491770 DNMT1P26358 1616 aaKnown RBP7.85□□□□□ -1.15
UBE2D4-211ENST00000491770 RNF17Q9BXT8 1623 aaKnown RBP7.85□□□□□ -1.15
UBE2D4-211ENST00000491770 WASHC2CQ9Y4E1 1318 aa7.85□□□□□ -1.15
UBE2D4-211ENST00000491770 DUOX2Q9NRD8 1548 aa7.85□□□□□ -1.15
UBE2D4-211ENST00000491770 RIOK3O14730 519 aaKnown RBP7.85□□□□□ -1.15
UBE2D4-211ENST00000491770 PYGBP11216 843 aa7.85□□□□□ -1.15
UBE2D4-211ENST00000491770 SHANK2Q9UPX8 1470 aa7.85□□□□□ -1.15
UBE2D4-211ENST00000491770 MBD5Q9P267 1494 aa7.84□□□□□ -1.15
UBE2D4-211ENST00000491770 CHGAP10645 457 aaKnown RBP7.84□□□□□ -1.15
UBE2D4-211ENST00000491770 FAM50AQ14320 339 aaKnown RBP7.84□□□□□ -1.15
UBE2D4-211ENST00000491770 FBXO41Q8TF61 875 aa7.84□□□□□ -1.15
UBE2D4-211ENST00000491770 TSPYL2Q9H2G4 693 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms