RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 NPATQ14207 1427 aa20.25■□□□□ 0.83
NUP188-208ENST00000491502 CLTCQ00610 1675 aaKnown RBP20.25■□□□□ 0.83
NUP188-208ENST00000491502 FAM135AQ9P2D6 1515 aa20.24■□□□□ 0.83
NUP188-208ENST00000491502 HSPA2P54652 639 aa20.24■□□□□ 0.83
NUP188-208ENST00000491502 WASHC2CQ9Y4E1 1318 aa20.24■□□□□ 0.83
NUP188-208ENST00000491502 DUOX2Q9NRD8 1548 aa20.23■□□□□ 0.83
NUP188-208ENST00000491502 CROCC2H7BZ55 1655 aa20.22■□□□□ 0.83
NUP188-208ENST00000491502 ANKRD30AQ9BXX3 1397 aa20.22■□□□□ 0.83
NUP188-208ENST00000491502 RRP7BPQ9NSQ0 103 aa20.22■□□□□ 0.83
NUP188-208ENST00000491502 KIF15Q9NS87 1388 aa20.21■□□□□ 0.83
NUP188-208ENST00000491502 EIF2AK4Q9P2K8 1649 aaKnown RBP20.2■□□□□ 0.82
NUP188-208ENST00000491502 CHIC2Q9UKJ5 165 aa20.2■□□□□ 0.82
NUP188-208ENST00000491502 KDM5DQ9BY66 1539 aa20.18■□□□□ 0.82
NUP188-208ENST00000491502 PTPRKQ15262 1439 aa20.18■□□□□ 0.82
NUP188-208ENST00000491502 ERBINQ96RT1 1412 aa20.18■□□□□ 0.82
NUP188-208ENST00000491502 RNF17Q9BXT8 1623 aaKnown RBP20.16■□□□□ 0.82
NUP188-208ENST00000491502 NCOA1Q15788 1441 aa20.16■□□□□ 0.82
NUP188-208ENST00000491502 ADGRL2O95490 1459 aa20.14■□□□□ 0.81
NUP188-208ENST00000491502 DMRT2Q9Y5R5 561 aa20.14■□□□□ 0.81
NUP188-208ENST00000491502 PZPP20742 1482 aa20.11■□□□□ 0.81
NUP188-208ENST00000491502 ZC3H13Q5T200 1668 aaKnown RBP20.1■□□□□ 0.81
NUP188-208ENST00000491502 FBXO31Q5XUX0 539 aaPredicted RBP20.1■□□□□ 0.81
NUP188-208ENST00000491502 KANK1Q14678 1352 aa20.09■□□□□ 0.81
NUP188-208ENST00000491502 ABCC3O15438 1527 aa20.09■□□□□ 0.81
NUP188-208ENST00000491502 TNRQ92752 1358 aa20.08■□□□□ 0.81
NUP188-208ENST00000491502 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.811e-6■■■■□ 21.9
NUP188-208ENST00000491502 MROH1Q8NDA8 1641 aa20.07■□□□□ 0.8
NUP188-208ENST00000491502 ITGAEP38570 1179 aa20.07■□□□□ 0.8
NUP188-208ENST00000491502 ROCK1Q13464 1354 aa20.06■□□□□ 0.8
NUP188-208ENST00000491502 PRDM15P57071 1507 aaPredicted RBP20.05■□□□□ 0.8
NUP188-208ENST00000491502 MYO3AQ8NEV4 1616 aa20.05■□□□□ 0.8
NUP188-208ENST00000491502 ANKRD50Q9ULJ7 1429 aa20.04■□□□□ 0.8
NUP188-208ENST00000491502 A2ML1A8K2U0 1454 aa20.04■□□□□ 0.8
NUP188-208ENST00000491502 CEP170BQ9Y4F5 1589 aaPredicted RBP20.04■□□□□ 0.8
NUP188-208ENST00000491502 ZNF142P52746 1687 aaPredicted RBP20.03■□□□□ 0.8
NUP188-208ENST00000491502 DEPDC5O75140 1603 aa20.03■□□□□ 0.8
NUP188-208ENST00000491502 STRCQ7RTU9 1775 aa20.03■□□□□ 0.8
NUP188-208ENST00000491502 ARHGAP31Q2M1Z3 1444 aa20.02■□□□□ 0.8
NUP188-208ENST00000491502 CAMSAP1Q5T5Y3 1602 aa20.02■□□□□ 0.79
NUP188-208ENST00000491502 PTPRTO14522 1441 aa20.02■□□□□ 0.79
NUP188-208ENST00000491502 NLRP1Q9C000 1473 aa20.01■□□□□ 0.79
NUP188-208ENST00000491502 PKD2Q13563 968 aa20.01■□□□□ 0.79
NUP188-208ENST00000491502 CEP152O94986 1710 aa20.01■□□□□ 0.79
NUP188-208ENST00000491502 PLA2R1Q13018 1463 aa19.99■□□□□ 0.79
NUP188-208ENST00000491502 THEMISQ8N1K5 641 aaPredicted RBP19.99■□□□□ 0.79
NUP188-208ENST00000491502 SPATA31D1Q6ZQQ2 1576 aa19.99■□□□□ 0.79
NUP188-208ENST00000491502 ERVK-7P63135 1459 aa19.98■□□□□ 0.79
NUP188-208ENST00000491502 LMTK2Q8IWU2 1503 aa19.97■□□□□ 0.79
NUP188-208ENST00000491502 VWDEQ8N2E2 1590 aa19.97■□□□□ 0.79
NUP188-208ENST00000491502 ACIN1Q9UKV3 1341 aaKnown RBP19.97■□□□□ 0.79
NUP188-208ENST00000491502 HRCP23327 699 aa19.96■□□□□ 0.79
NUP188-208ENST00000491502 NCKAP5LQ9HCH0 1330 aa19.96■□□□□ 0.79
NUP188-208ENST00000491502 CFAP65Q6ZU64 1925 aaKnown RBP19.96■□□□□ 0.79
NUP188-208ENST00000491502 ZEB1P37275 1124 aaPredicted RBP19.95■□□□□ 0.78
NUP188-208ENST00000491502 SETD5Q9C0A6 1442 aa19.93■□□□□ 0.78
NUP188-208ENST00000491502 CCER1Q8TC90 406 aaPredicted RBP19.93■□□□□ 0.78
NUP188-208ENST00000491502 UGGT1Q9NYU2 1555 aa19.92■□□□□ 0.78
NUP188-208ENST00000491502 ANKLE2Q86XL3 938 aa19.92■□□□□ 0.78
NUP188-208ENST00000491502 ILDR1Q86SU0 546 aaPredicted RBP19.89■□□□□ 0.77
NUP188-208ENST00000491502 CERKQ8TCT0 537 aa19.89■□□□□ 0.77
NUP188-208ENST00000491502 EFCAB6Q5THR3 1501 aa19.88■□□□□ 0.77
NUP188-208ENST00000491502 UNC13BO14795 1591 aa19.87■□□□□ 0.77
NUP188-208ENST00000491502 RPRD2Q5VT52 1461 aaKnown RBP19.87■□□□□ 0.77
NUP188-208ENST00000491502 HFM1A2PYH4 1435 aa19.87■□□□□ 0.77
NUP188-208ENST00000491502 FBXO41Q8TF61 875 aa19.87■□□□□ 0.77
NUP188-208ENST00000491502 SLC52A1Q9NWF4 448 aa19.86■□□□□ 0.77
NUP188-208ENST00000491502 NUP155O75694 1391 aa19.85■□□□□ 0.77
NUP188-208ENST00000491502 STAG3Q9UJ98 1225 aa19.85■□□□□ 0.77
NUP188-208ENST00000491502 NOS1P29475 1434 aa19.85■□□□□ 0.77
NUP188-208ENST00000491502 TET3O43151 1660 aa19.84■□□□□ 0.77
NUP188-208ENST00000491502 RAB3GAP2Q9H2M9 1393 aa19.84■□□□□ 0.77
NUP188-208ENST00000491502 IDI1Q13907 227 aa19.84■□□□□ 0.77
NUP188-208ENST00000491502 POLR1AO95602 1720 aaPredicted RBP19.82■□□□□ 0.76
NUP188-208ENST00000491502 GCC2Q8IWJ2 1684 aa19.81■□□□□ 0.76
NUP188-208ENST00000491502 UBR1Q8IWV7 1749 aa19.81■□□□□ 0.76
NUP188-208ENST00000491502 IQGAP3Q86VI3 1631 aa19.8■□□□□ 0.76
NUP188-208ENST00000491502 CLSPNQ9HAW4 1339 aa19.8■□□□□ 0.76
NUP188-208ENST00000491502 NAIPQ13075 1403 aa19.8■□□□□ 0.76
NUP188-208ENST00000491502 EID1Q9Y6B2 187 aa19.8■□□□□ 0.76
NUP188-208ENST00000491502 MED14O60244 1454 aa19.79■□□□□ 0.76
NUP188-208ENST00000491502 NPHP4O75161 1426 aaPredicted RBP19.78■□□□□ 0.76
NUP188-208ENST00000491502 TXNDC2Q86VQ3 553 aa19.78■□□□□ 0.76
NUP188-208ENST00000491502 SYNMO15061 1565 aa19.78■□□□□ 0.76
NUP188-208ENST00000491502 NEURL4Q96JN8 1562 aa19.78■□□□□ 0.76
NUP188-208ENST00000491502 KDM5AP29375 1690 aaKnown RBP19.78■□□□□ 0.76
NUP188-208ENST00000491502 PIK3C2BO00750 1634 aa19.77■□□□□ 0.76
NUP188-208ENST00000491502 LTBP4Q8N2S1 1624 aa19.77■□□□□ 0.76
NUP188-208ENST00000491502 ZNF335Q9H4Z2 1342 aaPredicted RBP19.76■□□□□ 0.75
NUP188-208ENST00000491502 SLIT1O75093 1534 aa19.76■□□□□ 0.75
NUP188-208ENST00000491502 ARHGAP23Q9P227 1491 aa19.76■□□□□ 0.75
NUP188-208ENST00000491502 TMEM2Q9UHN6 1383 aa19.75■□□□□ 0.75
NUP188-208ENST00000491502 SCAF11Q99590 1463 aaKnown RBP19.74■□□□□ 0.75
NUP188-208ENST00000491502 LTKP29376 864 aa19.74■□□□□ 0.75
NUP188-208ENST00000491502 E9PCH4 1651 aa19.74■□□□□ 0.75
NUP188-208ENST00000491502 HDGFP51858 240 aaKnown RBP19.73■□□□□ 0.75
NUP188-208ENST00000491502 IQSEC2Q5JU85 1478 aa19.73■□□□□ 0.75
NUP188-208ENST00000491502 TRIM52Q96A61 297 aa19.72■□□□□ 0.75
NUP188-208ENST00000491502 IQGAP1P46940 1657 aa19.71■□□□□ 0.75
NUP188-208ENST00000491502 ADGRB3O60242 1522 aa19.71■□□□□ 0.75
NUP188-208ENST00000491502 DHX57Q6P158 1386 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms