RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 KDM4FA0A1W2PPD8 638 aa13.67□□□□□ -0.22
CMSS1-206ENST00000491299 ARHGAP5Q13017 1502 aa13.67□□□□□ -0.22
CMSS1-206ENST00000491299 FRMPD1Q5SYB0 1578 aa13.66□□□□□ -0.22
CMSS1-206ENST00000491299 ATMINO43313 823 aaPredicted RBP13.66□□□□□ -0.22
CMSS1-206ENST00000491299 EFCAB2Q5VUJ9 269 aa13.66□□□□□ -0.22
CMSS1-206ENST00000491299 ASTLQ6HA08 431 aaPredicted RBP13.66□□□□□ -0.22
CMSS1-206ENST00000491299 BMP2KQ9NSY1 1161 aaPredicted RBP13.66□□□□□ -0.22
CMSS1-206ENST00000491299 PCDHB8Q9UN66 801 aa13.65□□□□□ -0.22
CMSS1-206ENST00000491299 PREX2Q70Z35 1606 aa13.64□□□□□ -0.23
CMSS1-206ENST00000491299 TIE1P35590 1138 aa13.63□□□□□ -0.23
CMSS1-206ENST00000491299 CDC42BPBQ9Y5S2 1711 aa13.63□□□□□ -0.23
CMSS1-206ENST00000491299 ARHGEF40Q8TER5 1519 aa13.63□□□□□ -0.23
CMSS1-206ENST00000491299 SCAPERQ9BY12 1400 aa13.63□□□□□ -0.23
CMSS1-206ENST00000491299 CHRM1P11229 460 aaPredicted RBP13.62□□□□□ -0.23
CMSS1-206ENST00000491299 ATN1P54259 1190 aaPredicted RBP13.62□□□□□ -0.23
CMSS1-206ENST00000491299 PELP1Q8IZL8 1130 aaKnown RBP13.62□□□□□ -0.23
CMSS1-206ENST00000491299 ZMYM4Q5VZL5 1548 aa13.62□□□□□ -0.23
CMSS1-206ENST00000491299 MTUS2Q5JR59 1369 aa13.61□□□□□ -0.23
CMSS1-206ENST00000491299 LOC105371045A0A1W2PR82 267 aa13.61□□□□□ -0.23
CMSS1-206ENST00000491299 POGZQ7Z3K3 1410 aa13.61□□□□□ -0.23
CMSS1-206ENST00000491299 CDC42BPAQ5VT25 1732 aa13.61□□□□□ -0.23
CMSS1-206ENST00000491299 ARID4BQ4LE39 1312 aaPredicted RBP13.61□□□□□ -0.23
CMSS1-206ENST00000491299 MAGI2Q86UL8 1455 aa13.61□□□□□ -0.23
CMSS1-206ENST00000491299 ZFYVE16Q7Z3T8 1539 aa13.6□□□□□ -0.23
CMSS1-206ENST00000491299 TTLL13PA6NNM8 815 aa13.59□□□□□ -0.23
CMSS1-206ENST00000491299 ZNF467Q7Z7K2 595 aaPredicted RBP13.59□□□□□ -0.23
CMSS1-206ENST00000491299 ZNF518AQ6AHZ1 1483 aa13.59□□□□□ -0.23
CMSS1-206ENST00000491299 EHBP1L1Q8N3D4 1523 aa13.59□□□□□ -0.23
CMSS1-206ENST00000491299 MYT1LQ9UL68 1186 aa13.58□□□□□ -0.24
CMSS1-206ENST00000491299 TMEM106CQ9BVX2 250 aa13.57□□□□□ -0.24
CMSS1-206ENST00000491299 ITSN2Q9NZM3 1697 aa13.56□□□□□ -0.24
CMSS1-206ENST00000491299 CCNB3Q8WWL7 1395 aa13.56□□□□□ -0.24
CMSS1-206ENST00000491299 BCORL1Q5H9F3 1711 aa13.56□□□□□ -0.24
CMSS1-206ENST00000491299 VPS8Q8N3P4 1428 aa13.56□□□□□ -0.24
CMSS1-206ENST00000491299 ABCC1P33527 1531 aa13.55□□□□□ -0.24
CMSS1-206ENST00000491299 HECW2Q9P2P5 1572 aa13.54□□□□□ -0.24
CMSS1-206ENST00000491299 ZNF777Q9ULD5 760 aaPredicted RBP13.54□□□□□ -0.24
CMSS1-206ENST00000491299 KDM5CP41229 1560 aa13.54□□□□□ -0.24
CMSS1-206ENST00000491299 SUPT6HQ7KZ85 1726 aaKnown RBP13.53□□□□□ -0.24
CMSS1-206ENST00000491299 SLC39A7Q92504 469 aa13.53□□□□□ -0.24
CMSS1-206ENST00000491299 METRNQ9UJH8 293 aa13.53□□□□□ -0.24
CMSS1-206ENST00000491299 YEATS2Q9ULM3 1422 aa13.53□□□□□ -0.24
CMSS1-206ENST00000491299 GPATCH8Q9UKJ3 1502 aaKnown RBP13.53□□□□□ -0.24
CMSS1-206ENST00000491299 ADAMTSL3P82987 1691 aa13.53□□□□□ -0.24
CMSS1-206ENST00000491299 CFDP1Q9UEE9 299 aaPredicted RBP13.52□□□□□ -0.25
CMSS1-206ENST00000491299 TRIM35Q9UPQ4 493 aa13.52□□□□□ -0.25
CMSS1-206ENST00000491299 C9orf84Q5VXU9 1444 aa13.52□□□□□ -0.25
CMSS1-206ENST00000491299 TIAM1Q13009 1591 aa13.52□□□□□ -0.25
CMSS1-206ENST00000491299 SAMD9LQ8IVG5 1584 aa13.51□□□□□ -0.25
CMSS1-206ENST00000491299 ATP10AO60312 1499 aa13.51□□□□□ -0.25
CMSS1-206ENST00000491299 PLEKHH2Q8IVE3 1493 aa13.51□□□□□ -0.25
CMSS1-206ENST00000491299 AFAP1Q8N556 730 aa13.51□□□□□ -0.25
CMSS1-206ENST00000491299 MADDQ8WXG6 1647 aa13.5□□□□□ -0.25
CMSS1-206ENST00000491299 SYCP2Q9BX26 1530 aa13.5□□□□□ -0.25
CMSS1-206ENST00000491299 LHX8Q68G74 356 aa13.49□□□□□ -0.25
CMSS1-206ENST00000491299 MLH3Q9UHC1 1453 aa13.48□□□□□ -0.25
CMSS1-206ENST00000491299 RIMS1Q86UR5 1692 aaKnown RBP13.48□□□□□ -0.25
CMSS1-206ENST00000491299 PTPRMP28827 1452 aa13.48□□□□□ -0.25
CMSS1-206ENST00000491299 FER1L4A9Z1Z3 1794 aa13.48□□□□□ -0.25
CMSS1-206ENST00000491299 TRAPPC8Q9Y2L5 1435 aa13.47□□□□□ -0.25
CMSS1-206ENST00000491299 DIP2CQ9Y2E4 1556 aa13.47□□□□□ -0.25
CMSS1-206ENST00000491299 C7P10643 843 aa13.47□□□□□ -0.25
CMSS1-206ENST00000491299 PSEN1P49768 467 aa13.47□□□□□ -0.25
CMSS1-206ENST00000491299 ARHGEF12Q9NZN5 1544 aa13.47□□□□□ -0.25
CMSS1-206ENST00000491299 ABCA6Q8N139 1617 aa13.46□□□□□ -0.25
CMSS1-206ENST00000491299 MLECQ14165 292 aa13.46□□□□□ -0.25
CMSS1-206ENST00000491299 SIGLEC1Q9BZZ2 1709 aa13.46□□□□□ -0.25
CMSS1-206ENST00000491299 NCOA2Q15596 1464 aa13.46□□□□□ -0.25
CMSS1-206ENST00000491299 KIAA1107Q9UPP5 1409 aa13.46□□□□□ -0.26
CMSS1-206ENST00000491299 MAP3K1Q13233 1512 aa13.45□□□□□ -0.26
CMSS1-206ENST00000491299 LRRC9Q6ZRR7 1453 aa13.45□□□□□ -0.26
CMSS1-206ENST00000491299 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
CMSS1-206ENST00000491299 PDAP1Q13442 181 aaKnown RBP13.45□□□□□ -0.26
CMSS1-206ENST00000491299 KIDINS220Q9ULH0 1771 aa13.45□□□□□ -0.26
CMSS1-206ENST00000491299 REREQ9P2R6 1566 aa13.45□□□□□ -0.26
CMSS1-206ENST00000491299 SPAG9O60271 1321 aaKnown RBP13.44□□□□□ -0.26
CMSS1-206ENST00000491299 HNRNPMP52272 730 aaKnown RBP eCLIP13.44□□□□□ -0.267e-7■■■■■ 41.5
CMSS1-206ENST00000491299 RNF25Q96BH1 459 aaPredicted RBP13.43□□□□□ -0.26
CMSS1-206ENST00000491299 PKD2Q13563 968 aa13.42□□□□□ -0.26
CMSS1-206ENST00000491299 ATP7AQ04656 1500 aa13.42□□□□□ -0.26
CMSS1-206ENST00000491299 RIOK3O14730 519 aaKnown RBP13.41□□□□□ -0.26
CMSS1-206ENST00000491299 ESF1Q9H501 851 aaKnown RBP13.41□□□□□ -0.26
CMSS1-206ENST00000491299 INO80Q9ULG1 1556 aaPredicted RBP13.41□□□□□ -0.26
CMSS1-206ENST00000491299 CAMSAP2Q08AD1 1489 aa13.4□□□□□ -0.26
CMSS1-206ENST00000491299 AGLP35573 1532 aa13.39□□□□□ -0.27
CMSS1-206ENST00000491299 SEC24BO95487 1268 aa13.39□□□□□ -0.27
CMSS1-206ENST00000491299 ILDR1Q86SU0 546 aaPredicted RBP13.39□□□□□ -0.27
CMSS1-206ENST00000491299 ADGBQ8N7X0 1667 aa13.38□□□□□ -0.27
CMSS1-206ENST00000491299 GOLGA2Q08379 1002 aa13.38□□□□□ -0.27
CMSS1-206ENST00000491299 IER5LQ5T953 404 aa13.38□□□□□ -0.27
CMSS1-206ENST00000491299 ZNF644Q9H582 1327 aaPredicted RBP13.38□□□□□ -0.27
CMSS1-206ENST00000491299 CCDC141Q6ZP82 1450 aa13.37□□□□□ -0.27
CMSS1-206ENST00000491299 POTEB2H3BUK9 544 aa13.37□□□□□ -0.27
CMSS1-206ENST00000491299 RSPH4AQ5TD94 716 aa13.37□□□□□ -0.27
CMSS1-206ENST00000491299 POTEFA5A3E0 1075 aa13.36□□□□□ -0.27
CMSS1-206ENST00000491299 KANK4Q5T7N3 995 aaPredicted RBP13.36□□□□□ -0.27
CMSS1-206ENST00000491299 MBD5Q9P267 1494 aa13.36□□□□□ -0.27
CMSS1-206ENST00000491299 COLQQ9Y215 455 aaPredicted RBP13.35□□□□□ -0.27
CMSS1-206ENST00000491299 MYOM3Q5VTT5 1437 aa13.35□□□□□ -0.27
CMSS1-206ENST00000491299 A2MP01023 1474 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms