RNA–Protein interactions for RNA: ENST00000490821.1

ALMS1-205, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 578 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-205ENST00000490821 UBTFP17480 764 aaKnown RBP13□□□□□ -0.33
ALMS1-205ENST00000490821 HNRNPMP52272 730 aaKnown RBP eCLIP13□□□□□ -0.33
ALMS1-205ENST00000490821 CASKIN1Q8WXD9 1431 aa12.99□□□□□ -0.33
ALMS1-205ENST00000490821 GGT6Q6P531 493 aa12.99□□□□□ -0.33
ALMS1-205ENST00000490821 EHMT2Q96KQ7 1210 aa12.99□□□□□ -0.33
ALMS1-205ENST00000490821 ZNF777Q9ULD5 760 aaPredicted RBP12.99□□□□□ -0.33
ALMS1-205ENST00000490821 ADGBQ8N7X0 1667 aa12.99□□□□□ -0.33
ALMS1-205ENST00000490821 KIAA1107Q9UPP5 1409 aa12.98□□□□□ -0.33
ALMS1-205ENST00000490821 STRCP1A6NGW2 1772 aa12.97□□□□□ -0.33
ALMS1-205ENST00000490821 RGS17Q9UGC6 210 aaPredicted RBP12.95□□□□□ -0.34
ALMS1-205ENST00000490821 PLEKHH2Q8IVE3 1493 aa12.95□□□□□ -0.34
ALMS1-205ENST00000490821 TNRQ92752 1358 aa12.94□□□□□ -0.34
ALMS1-205ENST00000490821 MED14O60244 1454 aa12.94□□□□□ -0.34
ALMS1-205ENST00000490821 DEPDC5O75140 1603 aa12.94□□□□□ -0.34
ALMS1-205ENST00000490821 HOXD11P31277 338 aaPredicted RBP12.93□□□□□ -0.34
ALMS1-205ENST00000490821 FBXO31Q5XUX0 539 aaPredicted RBP12.93□□□□□ -0.34
ALMS1-205ENST00000490821 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.93□□□□□ -0.34
ALMS1-205ENST00000490821 PZPP20742 1482 aa12.92□□□□□ -0.34
ALMS1-205ENST00000490821 RNF17Q9BXT8 1623 aaKnown RBP12.92□□□□□ -0.34
ALMS1-205ENST00000490821 NPHP4O75161 1426 aaPredicted RBP12.92□□□□□ -0.34
ALMS1-205ENST00000490821 IQGAP1P46940 1657 aa12.92□□□□□ -0.34
ALMS1-205ENST00000490821 LRRC7Q96NW7 1537 aa12.92□□□□□ -0.34
ALMS1-205ENST00000490821 FYCO1Q9BQS8 1478 aa12.91□□□□□ -0.34
ALMS1-205ENST00000490821 ANKLE2Q86XL3 938 aa12.91□□□□□ -0.34
ALMS1-205ENST00000490821 SYNMO15061 1565 aa12.9□□□□□ -0.34
ALMS1-205ENST00000490821 KDM5DQ9BY66 1539 aa12.9□□□□□ -0.34
ALMS1-205ENST00000490821 CFDP1Q9UEE9 299 aaPredicted RBP12.9□□□□□ -0.34
ALMS1-205ENST00000490821 UGGT1Q9NYU2 1555 aa12.9□□□□□ -0.35
ALMS1-205ENST00000490821 MBD5Q9P267 1494 aa12.89□□□□□ -0.35
ALMS1-205ENST00000490821 FAM135AQ9P2D6 1515 aa12.88□□□□□ -0.35
ALMS1-205ENST00000490821 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
ALMS1-205ENST00000490821 RNF216Q9NWF9 866 aaPredicted RBP12.88□□□□□ -0.35
ALMS1-205ENST00000490821 DHX29Q7Z478 1369 aaKnown RBP12.88□□□□□ -0.35
ALMS1-205ENST00000490821 NLRP1Q9C000 1473 aa12.88□□□□□ -0.35
ALMS1-205ENST00000490821 MIA2Q96PC5 1412 aa12.88□□□□□ -0.35
ALMS1-205ENST00000490821 ZC3H13Q5T200 1668 aaKnown RBP12.87□□□□□ -0.35
ALMS1-205ENST00000490821 THEMISQ8N1K5 641 aaPredicted RBP12.87□□□□□ -0.35
ALMS1-205ENST00000490821 XIRP1Q702N8 1843 aaKnown RBP12.87□□□□□ -0.35
ALMS1-205ENST00000490821 RTEL1-TNFRSF6BF6WH68 1400 aa12.87□□□□□ -0.35
ALMS1-205ENST00000490821 ZNF644Q9H582 1327 aaPredicted RBP12.87□□□□□ -0.35
ALMS1-205ENST00000490821 CCNB3Q8WWL7 1395 aa12.86□□□□□ -0.35
ALMS1-205ENST00000490821 TIAM1Q13009 1591 aa12.85□□□□□ -0.35
ALMS1-205ENST00000490821 KIF3BO15066 747 aa12.84□□□□□ -0.35
ALMS1-205ENST00000490821 POTEAQ6S8J7 498 aa12.84□□□□□ -0.35
ALMS1-205ENST00000490821 SETD1AO15047 1707 aaKnown RBP12.82□□□□□ -0.36
ALMS1-205ENST00000490821 WASHC2CQ9Y4E1 1318 aa12.82□□□□□ -0.36
ALMS1-205ENST00000490821 CFAP65Q6ZU64 1925 aaKnown RBP12.8□□□□□ -0.36
ALMS1-205ENST00000490821 UBR1Q8IWV7 1749 aa12.79□□□□□ -0.36
ALMS1-205ENST00000490821 MTUS2Q5JR59 1369 aa12.79□□□□□ -0.36
ALMS1-205ENST00000490821 CCDC141Q6ZP82 1450 aa12.78□□□□□ -0.36
ALMS1-205ENST00000490821 FAM135BQ49AJ0 1406 aa12.78□□□□□ -0.36
ALMS1-205ENST00000490821 ABCC3O15438 1527 aa12.78□□□□□ -0.36
ALMS1-205ENST00000490821 ERVK-7P63135 1459 aa12.77□□□□□ -0.37
ALMS1-205ENST00000490821 SCAF11Q99590 1463 aaKnown RBP12.77□□□□□ -0.37
ALMS1-205ENST00000490821 NCOA2Q15596 1464 aa12.76□□□□□ -0.37
ALMS1-205ENST00000490821 EHBP1L1Q8N3D4 1523 aa12.76□□□□□ -0.37
ALMS1-205ENST00000490821 ARHGAP23Q9P227 1491 aa12.75□□□□□ -0.37
ALMS1-205ENST00000490821 ROBO1Q9Y6N7 1651 aa12.75□□□□□ -0.37
ALMS1-205ENST00000490821 SRCAPQ6ZRS2 3230 aa12.75□□□□□ -0.37
ALMS1-205ENST00000490821 SLIT1O75093 1534 aa12.74□□□□□ -0.37
ALMS1-205ENST00000490821 CAMSAP2Q08AD1 1489 aa12.74□□□□□ -0.37
ALMS1-205ENST00000490821 CEP162Q5TB80 1403 aa12.74□□□□□ -0.37
ALMS1-205ENST00000490821 MROH1Q8NDA8 1641 aa12.73□□□□□ -0.37
ALMS1-205ENST00000490821 LTKP29376 864 aa12.73□□□□□ -0.37
ALMS1-205ENST00000490821 CEP152O94986 1710 aa12.73□□□□□ -0.37
ALMS1-205ENST00000490821 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
ALMS1-205ENST00000490821 ARHGEF5Q12774 1597 aa12.72□□□□□ -0.37
ALMS1-205ENST00000490821 MAP3K1Q13233 1512 aa12.72□□□□□ -0.37
ALMS1-205ENST00000490821 EIF2AK4Q9P2K8 1649 aaKnown RBP12.7□□□□□ -0.38
ALMS1-205ENST00000490821 RSPH4AQ5TD94 716 aa12.7□□□□□ -0.38
ALMS1-205ENST00000490821 TMEM94Q12767 1356 aa12.69□□□□□ -0.38
ALMS1-205ENST00000490821 TXNDC2Q86VQ3 553 aa12.69□□□□□ -0.38
ALMS1-205ENST00000490821 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
ALMS1-205ENST00000490821 KCNA4P22459 653 aa12.68□□□□□ -0.38
ALMS1-205ENST00000490821 MAST1Q9Y2H9 1570 aa12.67□□□□□ -0.38
ALMS1-205ENST00000490821 PHLPP1O60346 1717 aa12.67□□□□□ -0.38
ALMS1-205ENST00000490821 PIK3C2BO00750 1634 aa12.66□□□□□ -0.38
ALMS1-205ENST00000490821 LRRC9Q6ZRR7 1453 aa12.66□□□□□ -0.38
ALMS1-205ENST00000490821 UPF1Q92900 1129 aaKnown RBP eCLIP12.66□□□□□ -0.38
ALMS1-205ENST00000490821 TET3O43151 1660 aa12.64□□□□□ -0.39
ALMS1-205ENST00000490821 PRDM15P57071 1507 aaPredicted RBP12.64□□□□□ -0.39
ALMS1-205ENST00000490821 TSPY4P0CV99 314 aa12.64□□□□□ -0.39
ALMS1-205ENST00000490821 TSPY10P0CW01 314 aa12.64□□□□□ -0.39
ALMS1-205ENST00000490821 RBM33Q96EV2 1170 aaKnown RBP12.64□□□□□ -0.39
ALMS1-205ENST00000490821 TMEM2Q9UHN6 1383 aa12.64□□□□□ -0.39
ALMS1-205ENST00000490821 NWD1Q149M9 1564 aa12.64□□□□□ -0.39
ALMS1-205ENST00000490821 ARHGAP31Q2M1Z3 1444 aa12.63□□□□□ -0.39
ALMS1-205ENST00000490821 LRP6O75581 1613 aa12.63□□□□□ -0.39
ALMS1-205ENST00000490821 COL16A1Q07092 1604 aaPredicted RBP12.63□□□□□ -0.39
ALMS1-205ENST00000490821 KCNA6P17658 529 aa12.63□□□□□ -0.39
ALMS1-205ENST00000490821 EID1Q9Y6B2 187 aa12.63□□□□□ -0.39
ALMS1-205ENST00000490821 JCADQ9P266 1359 aa12.63□□□□□ -0.39
ALMS1-205ENST00000490821 KDM5AP29375 1690 aaKnown RBP12.63□□□□□ -0.39
ALMS1-205ENST00000490821 NKTRP30414 1462 aaKnown RBP12.61□□□□□ -0.39
ALMS1-205ENST00000490821 PROSER2Q86WR7 435 aaPredicted RBP12.61□□□□□ -0.39
ALMS1-205ENST00000490821 EFCAB6Q5THR3 1501 aa12.6□□□□□ -0.39
ALMS1-205ENST00000490821 DUOX2Q9NRD8 1548 aa12.59□□□□□ -0.39
ALMS1-205ENST00000490821 SLC26A8Q96RN1 970 aa12.59□□□□□ -0.39
ALMS1-205ENST00000490821 MSH6P52701 1360 aa12.58□□□□□ -0.4
ALMS1-205ENST00000490821 TRIM52Q96A61 297 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms