RNA–Protein interactions for RNA: ENST00000490705.1

ARF1-211, Transcript of ADP ribosylation factor 1, humanhuman

TSL 3

Gene ARF1, Length 881 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-211ENST00000490705 KDM5DQ9BY66 1539 aa20.62■□□□□ 0.89
ARF1-211ENST00000490705 UHRF1BP1Q6BDS2 1440 aa20.61■□□□□ 0.89
ARF1-211ENST00000490705 RNF17Q9BXT8 1623 aaKnown RBP20.61■□□□□ 0.89
ARF1-211ENST00000490705 CHIC2Q9UKJ5 165 aa20.61■□□□□ 0.89
ARF1-211ENST00000490705 FAM135AQ9P2D6 1515 aa20.61■□□□□ 0.89
ARF1-211ENST00000490705 HSPA2P54652 639 aa20.6■□□□□ 0.89
ARF1-211ENST00000490705 RRP7BPQ9NSQ0 103 aa20.6■□□□□ 0.89
ARF1-211ENST00000490705 ANKRD30AQ9BXX3 1397 aa20.59■□□□□ 0.89
ARF1-211ENST00000490705 NPATQ14207 1427 aa20.58■□□□□ 0.88
ARF1-211ENST00000490705 ERBINQ96RT1 1412 aa20.58■□□□□ 0.88
ARF1-211ENST00000490705 WASHC2CQ9Y4E1 1318 aa20.57■□□□□ 0.88
ARF1-211ENST00000490705 ADGRL2O95490 1459 aa20.56■□□□□ 0.88
ARF1-211ENST00000490705 MROH1Q8NDA8 1641 aa20.55■□□□□ 0.88
ARF1-211ENST00000490705 ZC3H13Q5T200 1668 aaKnown RBP20.54■□□□□ 0.88
ARF1-211ENST00000490705 PTPRKQ15262 1439 aa20.54■□□□□ 0.88
ARF1-211ENST00000490705 NCOA1Q15788 1441 aa20.54■□□□□ 0.88
ARF1-211ENST00000490705 ABCC3O15438 1527 aa20.52■□□□□ 0.87
ARF1-211ENST00000490705 MYO3AQ8NEV4 1616 aa20.51■□□□□ 0.87
ARF1-211ENST00000490705 PRDM15P57071 1507 aaPredicted RBP20.51■□□□□ 0.87
ARF1-211ENST00000490705 PZPP20742 1482 aa20.5■□□□□ 0.87
ARF1-211ENST00000490705 CEP152O94986 1710 aa20.5■□□□□ 0.87
ARF1-211ENST00000490705 DEPDC5O75140 1603 aa20.49■□□□□ 0.87
ARF1-211ENST00000490705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.48■□□□□ 0.873e-23■■□□□ 12.6
ARF1-211ENST00000490705 ZNF142P52746 1687 aaPredicted RBP20.47■□□□□ 0.87
ARF1-211ENST00000490705 CAMSAP1Q5T5Y3 1602 aa20.46■□□□□ 0.87
ARF1-211ENST00000490705 ITGAEP38570 1179 aa20.46■□□□□ 0.87
ARF1-211ENST00000490705 FBXO31Q5XUX0 539 aaPredicted RBP20.46■□□□□ 0.87
ARF1-211ENST00000490705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.46■□□□□ 0.87
ARF1-211ENST00000490705 CEP170BQ9Y4F5 1589 aaPredicted RBP20.46■□□□□ 0.87
ARF1-211ENST00000490705 KANK1Q14678 1352 aa20.45■□□□□ 0.86
ARF1-211ENST00000490705 TNRQ92752 1358 aa20.45■□□□□ 0.86
ARF1-211ENST00000490705 RRBP1Q9P2E9 1410 aaKnown RBP20.44■□□□□ 0.86
ARF1-211ENST00000490705 ANKRD50Q9ULJ7 1429 aa20.44■□□□□ 0.86
ARF1-211ENST00000490705 ROCK1Q13464 1354 aa20.43■□□□□ 0.86
ARF1-211ENST00000490705 STRCQ7RTU9 1775 aa20.42■□□□□ 0.86
ARF1-211ENST00000490705 A2ML1A8K2U0 1454 aa20.4■□□□□ 0.86
ARF1-211ENST00000490705 SPATA31D1Q6ZQQ2 1576 aa20.39■□□□□ 0.85
ARF1-211ENST00000490705 VWDEQ8N2E2 1590 aa20.39■□□□□ 0.85
ARF1-211ENST00000490705 ERVK-7P63135 1459 aa20.39■□□□□ 0.85
ARF1-211ENST00000490705 CFAP65Q6ZU64 1925 aaKnown RBP20.39■□□□□ 0.85
ARF1-211ENST00000490705 LMTK2Q8IWU2 1503 aa20.37■□□□□ 0.85
ARF1-211ENST00000490705 NLRP1Q9C000 1473 aa20.37■□□□□ 0.85
ARF1-211ENST00000490705 ARHGAP31Q2M1Z3 1444 aa20.36■□□□□ 0.85
ARF1-211ENST00000490705 DMRT2Q9Y5R5 561 aa20.35■□□□□ 0.85
ARF1-211ENST00000490705 UNC13BO14795 1591 aa20.34■□□□□ 0.85
ARF1-211ENST00000490705 PLA2R1Q13018 1463 aa20.34■□□□□ 0.85
ARF1-211ENST00000490705 EFCAB6Q5THR3 1501 aa20.33■□□□□ 0.85
ARF1-211ENST00000490705 UGGT1Q9NYU2 1555 aa20.32■□□□□ 0.84
ARF1-211ENST00000490705 PTPRTO14522 1441 aa20.3■□□□□ 0.84
ARF1-211ENST00000490705 NCKAP5LQ9HCH0 1330 aa20.29■□□□□ 0.84
ARF1-211ENST00000490705 TET3O43151 1660 aa20.29■□□□□ 0.84
ARF1-211ENST00000490705 GCC2Q8IWJ2 1684 aa20.27■□□□□ 0.84
ARF1-211ENST00000490705 PKD2Q13563 968 aa20.27■□□□□ 0.84
ARF1-211ENST00000490705 POLR1AO95602 1720 aaPredicted RBP20.27■□□□□ 0.83
ARF1-211ENST00000490705 THEMISQ8N1K5 641 aaPredicted RBP20.26■□□□□ 0.83
ARF1-211ENST00000490705 IQGAP3Q86VI3 1631 aa20.26■□□□□ 0.83
ARF1-211ENST00000490705 RPRD2Q5VT52 1461 aaKnown RBP20.24■□□□□ 0.83
ARF1-211ENST00000490705 NAIPQ13075 1403 aa20.24■□□□□ 0.83
ARF1-211ENST00000490705 UBR1Q8IWV7 1749 aa20.24■□□□□ 0.83
ARF1-211ENST00000490705 NUP155O75694 1391 aa20.23■□□□□ 0.83
ARF1-211ENST00000490705 SYNMO15061 1565 aa20.23■□□□□ 0.83
ARF1-211ENST00000490705 NOS1P29475 1434 aa20.22■□□□□ 0.83
ARF1-211ENST00000490705 PIK3C2BO00750 1634 aa20.22■□□□□ 0.83
ARF1-211ENST00000490705 HFM1A2PYH4 1435 aa20.21■□□□□ 0.83
ARF1-211ENST00000490705 NEURL4Q96JN8 1562 aa20.21■□□□□ 0.83
ARF1-211ENST00000490705 E9PCH4 1651 aa20.2■□□□□ 0.82
ARF1-211ENST00000490705 ANKLE2Q86XL3 938 aa20.19■□□□□ 0.82
ARF1-211ENST00000490705 STAG3Q9UJ98 1225 aa20.17■□□□□ 0.82
ARF1-211ENST00000490705 IDI1Q13907 227 aa20.16■□□□□ 0.82
ARF1-211ENST00000490705 KDM5AP29375 1690 aaKnown RBP20.16■□□□□ 0.82
ARF1-211ENST00000490705 CERKQ8TCT0 537 aa20.15■□□□□ 0.82
ARF1-211ENST00000490705 ADGRB3O60242 1522 aa20.14■□□□□ 0.81
ARF1-211ENST00000490705 SLIT1O75093 1534 aa20.14■□□□□ 0.81
ARF1-211ENST00000490705 NPHP4O75161 1426 aaPredicted RBP20.14■□□□□ 0.81
ARF1-211ENST00000490705 ILDR1Q86SU0 546 aaPredicted RBP20.14■□□□□ 0.81
ARF1-211ENST00000490705 SLC52A1Q9NWF4 448 aa20.14■□□□□ 0.81
ARF1-211ENST00000490705 MED14O60244 1454 aa20.13■□□□□ 0.81
ARF1-211ENST00000490705 IQGAP1P46940 1657 aa20.13■□□□□ 0.81
ARF1-211ENST00000490705 LTBP4Q8N2S1 1624 aa20.13■□□□□ 0.81
ARF1-211ENST00000490705 ARHGAP23Q9P227 1491 aa20.12■□□□□ 0.81
ARF1-211ENST00000490705 SCAF11Q99590 1463 aaKnown RBP20.11■□□□□ 0.81
ARF1-211ENST00000490705 ZNF335Q9H4Z2 1342 aaPredicted RBP20.11■□□□□ 0.81
ARF1-211ENST00000490705 TMEM2Q9UHN6 1383 aa20.1■□□□□ 0.81
ARF1-211ENST00000490705 FBXO41Q8TF61 875 aa20.1■□□□□ 0.81
ARF1-211ENST00000490705 TRIM52Q96A61 297 aa20.1■□□□□ 0.81
ARF1-211ENST00000490705 EID1Q9Y6B2 187 aa20.09■□□□□ 0.81
ARF1-211ENST00000490705 SPHKAPQ2M3C7 1700 aa20.08■□□□□ 0.81
ARF1-211ENST00000490705 TXNDC2Q86VQ3 553 aa20.08■□□□□ 0.81
ARF1-211ENST00000490705 MYO5BQ9ULV0 1848 aa20.08■□□□□ 0.8
ARF1-211ENST00000490705 LTKP29376 864 aa20.07■□□□□ 0.8
ARF1-211ENST00000490705 TMEM131LA2VDJ0 1609 aa20.05■□□□□ 0.8
ARF1-211ENST00000490705 CHGAP10645 457 aaKnown RBP20.04■□□□□ 0.8
ARF1-211ENST00000490705 IQSEC2Q5JU85 1478 aa20.01■□□□□ 0.79
ARF1-211ENST00000490705 SLC4A1APQ9BWU0 796 aaKnown RBP20.01■□□□□ 0.79
ARF1-211ENST00000490705 TRPM2O94759 1503 aa20■□□□□ 0.79
ARF1-211ENST00000490705 CPS1P31327 1500 aa20■□□□□ 0.79
ARF1-211ENST00000490705 RIMS2Q9UQ26 1411 aa20■□□□□ 0.79
ARF1-211ENST00000490705 ZFYVE9O95405 1425 aa19.99■□□□□ 0.79
ARF1-211ENST00000490705 SETD5Q9C0A6 1442 aa19.99■□□□□ 0.79
ARF1-211ENST00000490705 CLTCL1P53675 1640 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms