RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 DEPDC5O75140 1603 aa19.6■□□□□ 0.73
SNX12-205ENST00000490561 KDM5DQ9BY66 1539 aa19.6■□□□□ 0.73
SNX12-205ENST00000490561 KANK1Q14678 1352 aa19.59■□□□□ 0.73
SNX12-205ENST00000490561 TRIM52Q96A61 297 aa19.59■□□□□ 0.73
SNX12-205ENST00000490561 PRDM15P57071 1507 aaPredicted RBP19.58■□□□□ 0.73
SNX12-205ENST00000490561 FAM135AQ9P2D6 1515 aa19.57■□□□□ 0.72
SNX12-205ENST00000490561 PPP6R1Q9UPN7 881 aa19.57■□□□□ 0.72
SNX12-205ENST00000490561 NUP155O75694 1391 aa19.57■□□□□ 0.72
SNX12-205ENST00000490561 IQGAP3Q86VI3 1631 aa19.54■□□□□ 0.72
SNX12-205ENST00000490561 MROH1Q8NDA8 1641 aa19.53■□□□□ 0.72
SNX12-205ENST00000490561 VWDEQ8N2E2 1590 aa19.53■□□□□ 0.72
SNX12-205ENST00000490561 ARID4BQ4LE39 1312 aaPredicted RBP19.52■□□□□ 0.72
SNX12-205ENST00000490561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.52■□□□□ 0.72
SNX12-205ENST00000490561 GGT6Q6P531 493 aa19.51■□□□□ 0.71
SNX12-205ENST00000490561 LMTK2Q8IWU2 1503 aa19.51■□□□□ 0.71
SNX12-205ENST00000490561 ZC3H13Q5T200 1668 aaKnown RBP19.5■□□□□ 0.71
SNX12-205ENST00000490561 PZPP20742 1482 aa19.5■□□□□ 0.71
SNX12-205ENST00000490561 SLC4A1APQ9BWU0 796 aaKnown RBP19.5■□□□□ 0.71
SNX12-205ENST00000490561 DHX57Q6P158 1386 aaKnown RBP19.49■□□□□ 0.71
SNX12-205ENST00000490561 MPHOSPH9Q99550 1183 aa19.49■□□□□ 0.71
SNX12-205ENST00000490561 SIGLEC1Q9BZZ2 1709 aa19.48■□□□□ 0.71
SNX12-205ENST00000490561 WASHC2CQ9Y4E1 1318 aa19.47■□□□□ 0.71
SNX12-205ENST00000490561 CLSPNQ9HAW4 1339 aa19.46■□□□□ 0.71
SNX12-205ENST00000490561 TET3O43151 1660 aa19.46■□□□□ 0.71
SNX12-205ENST00000490561 ABCC3O15438 1527 aa19.46■□□□□ 0.71
SNX12-205ENST00000490561 CNTLNQ9NXG0 1405 aa19.45■□□□□ 0.7
SNX12-205ENST00000490561 ESF1Q9H501 851 aaKnown RBP19.45■□□□□ 0.7
SNX12-205ENST00000490561 CCER1Q8TC90 406 aaPredicted RBP19.44■□□□□ 0.7
SNX12-205ENST00000490561 EFCAB6Q5THR3 1501 aa19.42■□□□□ 0.7
SNX12-205ENST00000490561 MLECQ14165 292 aa19.42■□□□□ 0.7
SNX12-205ENST00000490561 RPRD2Q5VT52 1461 aaKnown RBP19.41■□□□□ 0.7
SNX12-205ENST00000490561 PKD2Q13563 968 aa19.41■□□□□ 0.7
SNX12-205ENST00000490561 ARHGAP31Q2M1Z3 1444 aa19.41■□□□□ 0.7
SNX12-205ENST00000490561 CEP152O94986 1710 aa19.4■□□□□ 0.7
SNX12-205ENST00000490561 CAMSAP1Q5T5Y3 1602 aa19.4■□□□□ 0.7
SNX12-205ENST00000490561 MROH2AA6NES4 1674 aa19.36■□□□□ 0.69
SNX12-205ENST00000490561 CLTCQ00610 1675 aaKnown RBP19.36■□□□□ 0.69
SNX12-205ENST00000490561 E9PCH4 1651 aa19.35■□□□□ 0.69
SNX12-205ENST00000490561 FER1L4A9Z1Z3 1794 aa19.34■□□□□ 0.69
SNX12-205ENST00000490561 NPATQ14207 1427 aa19.34■□□□□ 0.69
SNX12-205ENST00000490561 ADAMTSL3P82987 1691 aa19.33■□□□□ 0.68
SNX12-205ENST00000490561 ANKRD30BQ9BXX2 1392 aa19.32■□□□□ 0.68
SNX12-205ENST00000490561 PTPRTO14522 1441 aa19.32■□□□□ 0.68
SNX12-205ENST00000490561 ZMYM3Q14202 1370 aa19.31■□□□□ 0.68
SNX12-205ENST00000490561 TRPM2O94759 1503 aa19.3■□□□□ 0.68
SNX12-205ENST00000490561 MADDQ8WXG6 1647 aa19.29■□□□□ 0.68
SNX12-205ENST00000490561 FOXD1Q16676 465 aa19.29■□□□□ 0.68
SNX12-205ENST00000490561 SPHKAPQ2M3C7 1700 aa19.28■□□□□ 0.68
SNX12-205ENST00000490561 CCDC144AA2RUR9 1427 aa19.27■□□□□ 0.68
SNX12-205ENST00000490561 NOS1P29475 1434 aa19.27■□□□□ 0.68
SNX12-205ENST00000490561 ERVK-7P63135 1459 aa19.26■□□□□ 0.67
SNX12-205ENST00000490561 PREX1Q8TCU6 1659 aa19.25■□□□□ 0.67
SNX12-205ENST00000490561 SPATA31D1Q6ZQQ2 1576 aa19.25■□□□□ 0.67
SNX12-205ENST00000490561 PLA2R1Q13018 1463 aa19.25■□□□□ 0.67
SNX12-205ENST00000490561 RIMS1Q86UR5 1692 aaKnown RBP19.24■□□□□ 0.67
SNX12-205ENST00000490561 SLC52A1Q9NWF4 448 aa19.23■□□□□ 0.67
SNX12-205ENST00000490561 C3P01024 1663 aa19.22■□□□□ 0.67
SNX12-205ENST00000490561 ZEB1P37275 1124 aaPredicted RBP19.22■□□□□ 0.67
SNX12-205ENST00000490561 TIMELESSQ9UNS1 1208 aa19.21■□□□□ 0.67
SNX12-205ENST00000490561 TNRQ92752 1358 aa19.19■□□□□ 0.66
SNX12-205ENST00000490561 SYNMO15061 1565 aa19.19■□□□□ 0.66
SNX12-205ENST00000490561 FBXO31Q5XUX0 539 aaPredicted RBP19.18■□□□□ 0.66
SNX12-205ENST00000490561 SIN3AQ96ST3 1273 aa19.18■□□□□ 0.66
SNX12-205ENST00000490561 NEURL4Q96JN8 1562 aa19.18■□□□□ 0.66
SNX12-205ENST00000490561 PIK3C2BO00750 1634 aa19.18■□□□□ 0.66
SNX12-205ENST00000490561 CLTCL1P53675 1640 aa19.18■□□□□ 0.66
SNX12-205ENST00000490561 PTPRMP28827 1452 aa19.17■□□□□ 0.66
SNX12-205ENST00000490561 NEUROD1Q13562 356 aa19.17■□□□□ 0.66
SNX12-205ENST00000490561 TONSLQ96HA7 1378 aa19.16■□□□□ 0.66
SNX12-205ENST00000490561 NLRP1Q9C000 1473 aa19.16■□□□□ 0.66
SNX12-205ENST00000490561 CEBPAP49715 358 aaPredicted RBP19.14■□□□□ 0.65
SNX12-205ENST00000490561 CFAP65Q6ZU64 1925 aaKnown RBP19.13■□□□□ 0.65
SNX12-205ENST00000490561 KIF1BO60333 1816 aa19.12■□□□□ 0.65
SNX12-205ENST00000490561 UGGT1Q9NYU2 1555 aa19.12■□□□□ 0.65
SNX12-205ENST00000490561 ADGRB3O60242 1522 aa19.11■□□□□ 0.65
SNX12-205ENST00000490561 SPATA31E1Q6ZUB1 1445 aa19.11■□□□□ 0.65
SNX12-205ENST00000490561 IDI1Q13907 227 aa19.11■□□□□ 0.65
SNX12-205ENST00000490561 KDM4FA0A1W2PPD8 638 aa19.1■□□□□ 0.65
SNX12-205ENST00000490561 KDM5AP29375 1690 aaKnown RBP19.1■□□□□ 0.65
SNX12-205ENST00000490561 STAC3Q96MF2 364 aa19.09■□□□□ 0.65
SNX12-205ENST00000490561 STAG3Q9UJ98 1225 aa19.08■□□□□ 0.64
SNX12-205ENST00000490561 RPGRIP1LQ68CZ1 1315 aa19.07■□□□□ 0.64
SNX12-205ENST00000490561 PLPPR3Q6T4P5 718 aa19.07■□□□□ 0.64
SNX12-205ENST00000490561 MYO3AQ8NEV4 1616 aa19.07■□□□□ 0.64
SNX12-205ENST00000490561 A2ML1A8K2U0 1454 aa19.06■□□□□ 0.64
SNX12-205ENST00000490561 CHGAP10645 457 aaKnown RBP19.06■□□□□ 0.64
SNX12-205ENST00000490561 TMEM131LA2VDJ0 1609 aa19.06■□□□□ 0.64
SNX12-205ENST00000490561 SETD1BQ9UPS6 1966 aaKnown RBP19.05■□□□□ 0.64
SNX12-205ENST00000490561 L3MBTL2Q969R5 705 aa19.04■□□□□ 0.64
SNX12-205ENST00000490561 UHRF1BP1Q6BDS2 1440 aa19.03■□□□□ 0.64
SNX12-205ENST00000490561 ZNF326Q5BKZ1 582 aaKnown RBP19.03■□□□□ 0.64
SNX12-205ENST00000490561 AEBP2Q6ZN18 517 aaPredicted RBP19.03■□□□□ 0.64
SNX12-205ENST00000490561 CEP170BQ9Y4F5 1589 aaPredicted RBP19.02■□□□□ 0.64
SNX12-205ENST00000490561 ZNF142P52746 1687 aaPredicted RBP19.02■□□□□ 0.64
SNX12-205ENST00000490561 RGL3Q3MIN7 710 aa19.02■□□□□ 0.64
SNX12-205ENST00000490561 HDGFP51858 240 aaKnown RBP19.01■□□□□ 0.63
SNX12-205ENST00000490561 UBR1Q8IWV7 1749 aa19■□□□□ 0.63
SNX12-205ENST00000490561 THEMISQ8N1K5 641 aaPredicted RBP19■□□□□ 0.63
SNX12-205ENST00000490561 MYOM2P54296 1465 aa18.99■□□□□ 0.63
SNX12-205ENST00000490561 PPP1R15AO75807 674 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms