RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 FBXO31Q5XUX0 539 aaPredicted RBP23.82■■□□□ 1.4
PCCB-218ENST00000490504 RRP7BPQ9NSQ0 103 aa23.82■■□□□ 1.4
PCCB-218ENST00000490504 DAPK1P53355 1430 aa23.81■■□□□ 1.4
PCCB-218ENST00000490504 KDM5DQ9BY66 1539 aa23.8■■□□□ 1.4
PCCB-218ENST00000490504 SHANK2Q9UPX8 1470 aa23.8■■□□□ 1.4
PCCB-218ENST00000490504 DMRT2Q9Y5R5 561 aa23.8■■□□□ 1.4
PCCB-218ENST00000490504 KIF15Q9NS87 1388 aa23.79■■□□□ 1.4
PCCB-218ENST00000490504 CHIC2Q9UKJ5 165 aa23.79■■□□□ 1.4
PCCB-218ENST00000490504 STRCQ7RTU9 1775 aa23.77■■□□□ 1.4
PCCB-218ENST00000490504 DUOX2Q9NRD8 1548 aa23.77■■□□□ 1.4
PCCB-218ENST00000490504 FAM135AQ9P2D6 1515 aa23.77■■□□□ 1.4
PCCB-218ENST00000490504 FAM50AQ14320 339 aaKnown RBP23.77■■□□□ 1.4
PCCB-218ENST00000490504 NCOA1Q15788 1441 aa23.76■■□□□ 1.39
PCCB-218ENST00000490504 PZPP20742 1482 aa23.75■■□□□ 1.39
PCCB-218ENST00000490504 DNMT1P26358 1616 aaKnown RBP23.74■■□□□ 1.39
PCCB-218ENST00000490504 TNRQ92752 1358 aa23.73■■□□□ 1.39
PCCB-218ENST00000490504 RNF17Q9BXT8 1623 aaKnown RBP23.73■■□□□ 1.39
PCCB-218ENST00000490504 FBXO41Q8TF61 875 aa23.73■■□□□ 1.39
PCCB-218ENST00000490504 CAMSAP1Q5T5Y3 1602 aa23.72■■□□□ 1.39
PCCB-218ENST00000490504 CROCC2H7BZ55 1655 aa23.72■■□□□ 1.39
PCCB-218ENST00000490504 NCKAP5LQ9HCH0 1330 aa23.71■■□□□ 1.39
PCCB-218ENST00000490504 MYO3AQ8NEV4 1616 aa23.71■■□□□ 1.39
PCCB-218ENST00000490504 ANKRD30AQ9BXX3 1397 aa23.71■■□□□ 1.39
PCCB-218ENST00000490504 EIF2AK4Q9P2K8 1649 aaKnown RBP23.71■■□□□ 1.39
PCCB-218ENST00000490504 ABCC3O15438 1527 aa23.71■■□□□ 1.39
PCCB-218ENST00000490504 PTPRTO14522 1441 aa23.71■■□□□ 1.39
PCCB-218ENST00000490504 ERBINQ96RT1 1412 aa23.7■■□□□ 1.38
PCCB-218ENST00000490504 CEP170BQ9Y4F5 1589 aaPredicted RBP23.7■■□□□ 1.38
PCCB-218ENST00000490504 MROH1Q8NDA8 1641 aa23.69■■□□□ 1.38
PCCB-218ENST00000490504 CERKQ8TCT0 537 aa23.69■■□□□ 1.38
PCCB-218ENST00000490504 A2ML1A8K2U0 1454 aa23.68■■□□□ 1.38
PCCB-218ENST00000490504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.67■■□□□ 1.38
PCCB-218ENST00000490504 ZNF142P52746 1687 aaPredicted RBP23.66■■□□□ 1.38
PCCB-218ENST00000490504 PLA2R1Q13018 1463 aa23.64■■□□□ 1.38
PCCB-218ENST00000490504 PKD2Q13563 968 aa23.64■■□□□ 1.38
PCCB-218ENST00000490504 ADGRL2O95490 1459 aa23.62■■□□□ 1.37
PCCB-218ENST00000490504 ZC3H13Q5T200 1668 aaKnown RBP23.6■■□□□ 1.37
PCCB-218ENST00000490504 PRDM15P57071 1507 aaPredicted RBP23.6■■□□□ 1.37
PCCB-218ENST00000490504 ERVK-7P63135 1459 aa23.59■■□□□ 1.37
PCCB-218ENST00000490504 NLRP1Q9C000 1473 aa23.59■■□□□ 1.37
PCCB-218ENST00000490504 KANK1Q14678 1352 aa23.57■■□□□ 1.36
PCCB-218ENST00000490504 SPATA31D1Q6ZQQ2 1576 aa23.57■■□□□ 1.36
PCCB-218ENST00000490504 THEMISQ8N1K5 641 aaPredicted RBP23.57■■□□□ 1.36
PCCB-218ENST00000490504 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.57■■□□□ 1.36
PCCB-218ENST00000490504 ARHGAP31Q2M1Z3 1444 aa23.56■■□□□ 1.36
PCCB-218ENST00000490504 CEP152O94986 1710 aa23.56■■□□□ 1.36
PCCB-218ENST00000490504 HRCP23327 699 aa23.55■■□□□ 1.36
PCCB-218ENST00000490504 ANKRD50Q9ULJ7 1429 aa23.55■■□□□ 1.36
PCCB-218ENST00000490504 DEPDC5O75140 1603 aa23.54■■□□□ 1.36
PCCB-218ENST00000490504 ITGAEP38570 1179 aa23.53■■□□□ 1.36
PCCB-218ENST00000490504 UGGT1Q9NYU2 1555 aa23.53■■□□□ 1.36
PCCB-218ENST00000490504 RRBP1Q9P2E9 1410 aaKnown RBP23.52■■□□□ 1.36
PCCB-218ENST00000490504 ANKLE2Q86XL3 938 aa23.52■■□□□ 1.36
PCCB-218ENST00000490504 ZNF335Q9H4Z2 1342 aaPredicted RBP23.52■■□□□ 1.36
PCCB-218ENST00000490504 LTBP4Q8N2S1 1624 aa23.52■■□□□ 1.36
PCCB-218ENST00000490504 VWDEQ8N2E2 1590 aa23.5■■□□□ 1.35
PCCB-218ENST00000490504 LMTK2Q8IWU2 1503 aa23.49■■□□□ 1.35
PCCB-218ENST00000490504 ROCK1Q13464 1354 aa23.49■■□□□ 1.35
PCCB-218ENST00000490504 NEURL4Q96JN8 1562 aa23.45■■□□□ 1.34
PCCB-218ENST00000490504 CFAP65Q6ZU64 1925 aaKnown RBP23.42■■□□□ 1.34
PCCB-218ENST00000490504 IDI1Q13907 227 aa23.41■■□□□ 1.34
PCCB-218ENST00000490504 NPHP4O75161 1426 aaPredicted RBP23.41■■□□□ 1.34
PCCB-218ENST00000490504 EFCAB6Q5THR3 1501 aa23.4■■□□□ 1.34
PCCB-218ENST00000490504 MED14O60244 1454 aa23.4■■□□□ 1.34
PCCB-218ENST00000490504 NOS1P29475 1434 aa23.39■■□□□ 1.34
PCCB-218ENST00000490504 LTKP29376 864 aa23.38■■□□□ 1.33
PCCB-218ENST00000490504 POLR1AO95602 1720 aaPredicted RBP23.37■■□□□ 1.33
PCCB-218ENST00000490504 TXNDC2Q86VQ3 553 aa23.37■■□□□ 1.33
PCCB-218ENST00000490504 STAG3Q9UJ98 1225 aa23.37■■□□□ 1.33
PCCB-218ENST00000490504 UBR1Q8IWV7 1749 aa23.36■■□□□ 1.33
PCCB-218ENST00000490504 IQSEC2Q5JU85 1478 aa23.35■■□□□ 1.33
PCCB-218ENST00000490504 ARHGAP23Q9P227 1491 aa23.34■■□□□ 1.33
PCCB-218ENST00000490504 SYNMO15061 1565 aa23.34■■□□□ 1.33
PCCB-218ENST00000490504 SLC52A1Q9NWF4 448 aa23.33■■□□□ 1.33
PCCB-218ENST00000490504 UNC13BO14795 1591 aa23.33■■□□□ 1.33
PCCB-218ENST00000490504 SLIT1O75093 1534 aa23.33■■□□□ 1.32
PCCB-218ENST00000490504 PIK3C2BO00750 1634 aa23.33■■□□□ 1.32
PCCB-218ENST00000490504 NUP155O75694 1391 aa23.33■■□□□ 1.32
PCCB-218ENST00000490504 TMEM2Q9UHN6 1383 aa23.33■■□□□ 1.32
PCCB-218ENST00000490504 RPRD2Q5VT52 1461 aaKnown RBP23.32■■□□□ 1.32
PCCB-218ENST00000490504 SCAF11Q99590 1463 aaKnown RBP23.32■■□□□ 1.32
PCCB-218ENST00000490504 EID1Q9Y6B2 187 aa23.32■■□□□ 1.32
PCCB-218ENST00000490504 TET3O43151 1660 aa23.29■■□□□ 1.32
PCCB-218ENST00000490504 IQGAP1P46940 1657 aa23.28■■□□□ 1.32
PCCB-218ENST00000490504 ZEB1P37275 1124 aaPredicted RBP23.28■■□□□ 1.32
PCCB-218ENST00000490504 UBAP1LF5GYI3 381 aa23.27■■□□□ 1.32
PCCB-218ENST00000490504 CPS1P31327 1500 aa23.26■■□□□ 1.31
PCCB-218ENST00000490504 NAIPQ13075 1403 aa23.24■■□□□ 1.31
PCCB-218ENST00000490504 IQGAP3Q86VI3 1631 aa23.23■■□□□ 1.31
PCCB-218ENST00000490504 ADGRB3O60242 1522 aa23.23■■□□□ 1.31
PCCB-218ENST00000490504 GCC2Q8IWJ2 1684 aa23.21■■□□□ 1.31
PCCB-218ENST00000490504 CCER1Q8TC90 406 aaPredicted RBP23.21■■□□□ 1.31
PCCB-218ENST00000490504 KDM5AP29375 1690 aaKnown RBP23.2■■□□□ 1.3
PCCB-218ENST00000490504 E9PCH4 1651 aa23.2■■□□□ 1.3
PCCB-218ENST00000490504 CHGAP10645 457 aaKnown RBP23.19■■□□□ 1.3
PCCB-218ENST00000490504 SLC26A8Q96RN1 970 aa23.18■■□□□ 1.3
PCCB-218ENST00000490504 SENP3Q9H4L4 574 aaPredicted RBP23.15■■□□□ 1.3
PCCB-218ENST00000490504 HFM1A2PYH4 1435 aa23.15■■□□□ 1.3
PCCB-218ENST00000490504 ZFYVE9O95405 1425 aa23.15■■□□□ 1.3
PCCB-218ENST00000490504 LRRC7Q96NW7 1537 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms