RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 ARID4BQ4LE39 1312 aaPredicted RBP18.78■□□□□ 0.6
HDAC1-210ENST00000490081 HRCP23327 699 aa18.77■□□□□ 0.6
HDAC1-210ENST00000490081 RNF17Q9BXT8 1623 aaKnown RBP18.76■□□□□ 0.59
HDAC1-210ENST00000490081 FAM135AQ9P2D6 1515 aa18.75■□□□□ 0.59
HDAC1-210ENST00000490081 RIMS1Q86UR5 1692 aaKnown RBP18.75■□□□□ 0.59
HDAC1-210ENST00000490081 DEPDC5O75140 1603 aa18.74■□□□□ 0.59
HDAC1-210ENST00000490081 KIF3BO15066 747 aa18.74■□□□□ 0.59
HDAC1-210ENST00000490081 ILDR1Q86SU0 546 aaPredicted RBP18.73■□□□□ 0.59
HDAC1-210ENST00000490081 SETD5Q9C0A6 1442 aa18.72■□□□□ 0.59
HDAC1-210ENST00000490081 LMTK3Q96Q04 1460 aa18.71■□□□□ 0.59
HDAC1-210ENST00000490081 KDM5DQ9BY66 1539 aa18.7■□□□□ 0.58
HDAC1-210ENST00000490081 MROH1Q8NDA8 1641 aa18.7■□□□□ 0.58
HDAC1-210ENST00000490081 PRDM15P57071 1507 aaPredicted RBP18.69■□□□□ 0.58
HDAC1-210ENST00000490081 UNC13BO14795 1591 aa18.68■□□□□ 0.58
HDAC1-210ENST00000490081 VWDEQ8N2E2 1590 aa18.68■□□□□ 0.58
HDAC1-210ENST00000490081 CNTLNQ9NXG0 1405 aa18.67■□□□□ 0.58
HDAC1-210ENST00000490081 GGT6Q6P531 493 aa18.67■□□□□ 0.58
HDAC1-210ENST00000490081 ZC3H13Q5T200 1668 aaKnown RBP18.66■□□□□ 0.58
HDAC1-210ENST00000490081 KANK1Q14678 1352 aa18.65■□□□□ 0.58
HDAC1-210ENST00000490081 FER1L4A9Z1Z3 1794 aa18.65■□□□□ 0.58
HDAC1-210ENST00000490081 LMTK2Q8IWU2 1503 aa18.64■□□□□ 0.58
HDAC1-210ENST00000490081 MROH2AA6NES4 1674 aa18.63■□□□□ 0.57
HDAC1-210ENST00000490081 MLECQ14165 292 aa18.62■□□□□ 0.57
HDAC1-210ENST00000490081 WASHC2CQ9Y4E1 1318 aa18.62■□□□□ 0.57
HDAC1-210ENST00000490081 RAB3GAP2Q9H2M9 1393 aa18.62■□□□□ 0.57
HDAC1-210ENST00000490081 IQGAP3Q86VI3 1631 aa18.61■□□□□ 0.57
HDAC1-210ENST00000490081 ABCC3O15438 1527 aa18.6■□□□□ 0.57
HDAC1-210ENST00000490081 ARHGAP31Q2M1Z3 1444 aa18.6■□□□□ 0.57
HDAC1-210ENST00000490081 ESF1Q9H501 851 aaKnown RBP18.6■□□□□ 0.57
HDAC1-210ENST00000490081 NUP155O75694 1391 aa18.59■□□□□ 0.57
HDAC1-210ENST00000490081 ZMYM3Q14202 1370 aa18.57■□□□□ 0.56
HDAC1-210ENST00000490081 CLTCQ00610 1675 aaKnown RBP18.57■□□□□ 0.56
HDAC1-210ENST00000490081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.57■□□□□ 0.564e-9■■■□□ 15.7
HDAC1-210ENST00000490081 TET3O43151 1660 aa18.57■□□□□ 0.56
HDAC1-210ENST00000490081 CEP152O94986 1710 aa18.56■□□□□ 0.56
HDAC1-210ENST00000490081 RPRD2Q5VT52 1461 aaKnown RBP18.55■□□□□ 0.56
HDAC1-210ENST00000490081 HSPA2P54652 639 aa18.55■□□□□ 0.56
HDAC1-210ENST00000490081 CAMSAP1Q5T5Y3 1602 aa18.54■□□□□ 0.56
HDAC1-210ENST00000490081 PCGF6Q9BYE7 350 aa18.54■□□□□ 0.56
HDAC1-210ENST00000490081 SETD1BQ9UPS6 1966 aaKnown RBP18.53■□□□□ 0.56
HDAC1-210ENST00000490081 PLPPR3Q6T4P5 718 aa18.53■□□□□ 0.56
HDAC1-210ENST00000490081 PZPP20742 1482 aa18.52■□□□□ 0.56
HDAC1-210ENST00000490081 TRIM52Q96A61 297 aa18.52■□□□□ 0.56
HDAC1-210ENST00000490081 C3P01024 1663 aa18.52■□□□□ 0.56
HDAC1-210ENST00000490081 EFCAB6Q5THR3 1501 aa18.52■□□□□ 0.56
HDAC1-210ENST00000490081 CEBPAP49715 358 aaPredicted RBP18.51■□□□□ 0.55
HDAC1-210ENST00000490081 PREX1Q8TCU6 1659 aa18.5■□□□□ 0.55
HDAC1-210ENST00000490081 NPATQ14207 1427 aa18.5■□□□□ 0.55
HDAC1-210ENST00000490081 MPHOSPH9Q99550 1183 aa18.5■□□□□ 0.55
HDAC1-210ENST00000490081 SLC4A1APQ9BWU0 796 aaKnown RBP18.48■□□□□ 0.55
HDAC1-210ENST00000490081 E9PCH4 1651 aa18.47■□□□□ 0.55
HDAC1-210ENST00000490081 FBXO41Q8TF61 875 aa18.47■□□□□ 0.55
HDAC1-210ENST00000490081 SPATA31D1Q6ZQQ2 1576 aa18.47■□□□□ 0.55
HDAC1-210ENST00000490081 NOS1P29475 1434 aa18.46■□□□□ 0.55
HDAC1-210ENST00000490081 PTPRTO14522 1441 aa18.45■□□□□ 0.54
HDAC1-210ENST00000490081 PKD2Q13563 968 aa18.44■□□□□ 0.54
HDAC1-210ENST00000490081 ERVK-7P63135 1459 aa18.43■□□□□ 0.54
HDAC1-210ENST00000490081 CFAP65Q6ZU64 1925 aaKnown RBP18.43■□□□□ 0.54
HDAC1-210ENST00000490081 STRCQ7RTU9 1775 aa18.41■□□□□ 0.54
HDAC1-210ENST00000490081 FBXO31Q5XUX0 539 aaPredicted RBP18.41■□□□□ 0.54
HDAC1-210ENST00000490081 SLC52A1Q9NWF4 448 aa18.4■□□□□ 0.54
HDAC1-210ENST00000490081 UHRF1BP1Q6BDS2 1440 aa18.4■□□□□ 0.54
HDAC1-210ENST00000490081 SPHKAPQ2M3C7 1700 aa18.39■□□□□ 0.53
HDAC1-210ENST00000490081 TNRQ92752 1358 aa18.38■□□□□ 0.53
HDAC1-210ENST00000490081 NLRP1Q9C000 1473 aa18.38■□□□□ 0.53
HDAC1-210ENST00000490081 PLA2R1Q13018 1463 aa18.37■□□□□ 0.53
HDAC1-210ENST00000490081 PIK3C2BO00750 1634 aa18.36■□□□□ 0.53
HDAC1-210ENST00000490081 SYNMO15061 1565 aa18.36■□□□□ 0.53
HDAC1-210ENST00000490081 TRPM2O94759 1503 aa18.36■□□□□ 0.53
HDAC1-210ENST00000490081 KDM5AP29375 1690 aaKnown RBP18.35■□□□□ 0.53
HDAC1-210ENST00000490081 DHX57Q6P158 1386 aaKnown RBP18.35■□□□□ 0.53
HDAC1-210ENST00000490081 ANKRD30BQ9BXX2 1392 aa18.35■□□□□ 0.53
HDAC1-210ENST00000490081 ZNF142P52746 1687 aaPredicted RBP18.32■□□□□ 0.52
HDAC1-210ENST00000490081 IDI1Q13907 227 aa18.32■□□□□ 0.52
HDAC1-210ENST00000490081 A2ML1A8K2U0 1454 aa18.32■□□□□ 0.52
HDAC1-210ENST00000490081 MYO3AQ8NEV4 1616 aa18.31■□□□□ 0.52
HDAC1-210ENST00000490081 CERKQ8TCT0 537 aa18.31■□□□□ 0.52
HDAC1-210ENST00000490081 FOXD1Q16676 465 aa18.3■□□□□ 0.52
HDAC1-210ENST00000490081 NEURL4Q96JN8 1562 aa18.3■□□□□ 0.52
HDAC1-210ENST00000490081 CLSPNQ9HAW4 1339 aa18.29■□□□□ 0.52
HDAC1-210ENST00000490081 DMRT2Q9Y5R5 561 aa18.29■□□□□ 0.52
HDAC1-210ENST00000490081 CEP170BQ9Y4F5 1589 aaPredicted RBP18.28■□□□□ 0.52
HDAC1-210ENST00000490081 CLTCL1P53675 1640 aa18.27■□□□□ 0.51
HDAC1-210ENST00000490081 KIF1BO60333 1816 aa18.26■□□□□ 0.51
HDAC1-210ENST00000490081 CCDC144AA2RUR9 1427 aa18.26■□□□□ 0.51
HDAC1-210ENST00000490081 THEMISQ8N1K5 641 aaPredicted RBP18.26■□□□□ 0.51
HDAC1-210ENST00000490081 UBR1Q8IWV7 1749 aa18.26■□□□□ 0.51
HDAC1-210ENST00000490081 TMEM131LA2VDJ0 1609 aa18.25■□□□□ 0.51
HDAC1-210ENST00000490081 UGGT1Q9NYU2 1555 aa18.25■□□□□ 0.51
HDAC1-210ENST00000490081 ADGRB3O60242 1522 aa18.23■□□□□ 0.51
HDAC1-210ENST00000490081 SLIT1O75093 1534 aa18.21■□□□□ 0.51
HDAC1-210ENST00000490081 SPATA31E1Q6ZUB1 1445 aa18.21■□□□□ 0.51
HDAC1-210ENST00000490081 LTBP4Q8N2S1 1624 aa18.2■□□□□ 0.5
HDAC1-210ENST00000490081 RPGRIP1LQ68CZ1 1315 aa18.2■□□□□ 0.5
HDAC1-210ENST00000490081 ARHGAP23Q9P227 1491 aa18.2■□□□□ 0.5
HDAC1-210ENST00000490081 MYO5BQ9ULV0 1848 aa18.19■□□□□ 0.5
HDAC1-210ENST00000490081 HDGFP51858 240 aaKnown RBP18.18■□□□□ 0.5
HDAC1-210ENST00000490081 STAC3Q96MF2 364 aa18.18■□□□□ 0.5
HDAC1-210ENST00000490081 STAG3Q9UJ98 1225 aa18.18■□□□□ 0.5
HDAC1-210ENST00000490081 TMEM2Q9UHN6 1383 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms