RNA–Protein interactions for RNA: ENST00000490005.1

SOX2-OT-211, SOX2 overlapping transcript, humanhuman

TSL 2

Gene SOX2-OT, Length 387 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-211ENST00000490005 PPP6R1Q9UPN7 881 aa21.44■■□□□ 1.02
SOX2-OT-211ENST00000490005 KIF15Q9NS87 1388 aa21.44■■□□□ 1.02
SOX2-OT-211ENST00000490005 STRCQ7RTU9 1775 aa21.43■■□□□ 1.02
SOX2-OT-211ENST00000490005 WASHC2CQ9Y4E1 1318 aa21.43■■□□□ 1.02
SOX2-OT-211ENST00000490005 SHANK2Q9UPX8 1470 aa21.43■■□□□ 1.02
SOX2-OT-211ENST00000490005 DNMT1P26358 1616 aaKnown RBP21.43■■□□□ 1.02
SOX2-OT-211ENST00000490005 CROCC2H7BZ55 1655 aa21.42■■□□□ 1.02
SOX2-OT-211ENST00000490005 MROH1Q8NDA8 1641 aa21.42■■□□□ 1.02
SOX2-OT-211ENST00000490005 MYO3AQ8NEV4 1616 aa21.42■■□□□ 1.02
SOX2-OT-211ENST00000490005 FAM50AQ14320 339 aaKnown RBP21.41■■□□□ 1.02
SOX2-OT-211ENST00000490005 NCOA1Q15788 1441 aa21.4■■□□□ 1.02
SOX2-OT-211ENST00000490005 RNF17Q9BXT8 1623 aaKnown RBP21.4■■□□□ 1.02
SOX2-OT-211ENST00000490005 DUOX2Q9NRD8 1548 aa21.39■■□□□ 1.02
SOX2-OT-211ENST00000490005 ABCC3O15438 1527 aa21.39■■□□□ 1.01
SOX2-OT-211ENST00000490005 PZPP20742 1482 aa21.39■■□□□ 1.01
SOX2-OT-211ENST00000490005 CAMSAP1Q5T5Y3 1602 aa21.38■■□□□ 1.01
SOX2-OT-211ENST00000490005 NCKAP5LQ9HCH0 1330 aa21.37■■□□□ 1.01
SOX2-OT-211ENST00000490005 CEP170BQ9Y4F5 1589 aaPredicted RBP21.37■■□□□ 1.01
SOX2-OT-211ENST00000490005 SETD1BQ9UPS6 1966 aaKnown RBP21.37■■□□□ 1.01
SOX2-OT-211ENST00000490005 TNRQ92752 1358 aa21.36■■□□□ 1.01
SOX2-OT-211ENST00000490005 EIF2AK4Q9P2K8 1649 aaKnown RBP21.35■■□□□ 1.01
SOX2-OT-211ENST00000490005 FAM135AQ9P2D6 1515 aa21.34■■□□□ 1.01
SOX2-OT-211ENST00000490005 ERBINQ96RT1 1412 aa21.33■■□□□ 1.01
SOX2-OT-211ENST00000490005 ZNF142P52746 1687 aaPredicted RBP21.33■■□□□ 1
SOX2-OT-211ENST00000490005 A2ML1A8K2U0 1454 aa21.32■■□□□ 1
SOX2-OT-211ENST00000490005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.32■■□□□ 1
SOX2-OT-211ENST00000490005 ANKRD30AQ9BXX3 1397 aa21.31■■□□□ 1
SOX2-OT-211ENST00000490005 PTPRTO14522 1441 aa21.3■■□□□ 1
SOX2-OT-211ENST00000490005 PRDM15P57071 1507 aaPredicted RBP21.29■■□□□ 1
SOX2-OT-211ENST00000490005 CERKQ8TCT0 537 aa21.29■■□□□ 1
SOX2-OT-211ENST00000490005 FBXO41Q8TF61 875 aa21.29■■□□□ 1
SOX2-OT-211ENST00000490005 ADGRL2O95490 1459 aa21.28■■□□□ 1
SOX2-OT-211ENST00000490005 DMRT2Q9Y5R5 561 aa21.28■■□□□ 1
SOX2-OT-211ENST00000490005 CEP152O94986 1710 aa21.28■■□□□ 1
SOX2-OT-211ENST00000490005 ERVK-7P63135 1459 aa21.27■■□□□ 1
SOX2-OT-211ENST00000490005 PLA2R1Q13018 1463 aa21.26■□□□□ 0.99
SOX2-OT-211ENST00000490005 ZC3H13Q5T200 1668 aaKnown RBP21.24■□□□□ 0.99
SOX2-OT-211ENST00000490005 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.24■□□□□ 0.99
SOX2-OT-211ENST00000490005 SPATA31D1Q6ZQQ2 1576 aa21.24■□□□□ 0.99
SOX2-OT-211ENST00000490005 DEPDC5O75140 1603 aa21.23■□□□□ 0.99
SOX2-OT-211ENST00000490005 ITGAEP38570 1179 aa21.23■□□□□ 0.99
SOX2-OT-211ENST00000490005 ZNF335Q9H4Z2 1342 aaPredicted RBP21.22■□□□□ 0.99
SOX2-OT-211ENST00000490005 NLRP1Q9C000 1473 aa21.21■□□□□ 0.99
SOX2-OT-211ENST00000490005 LTBP4Q8N2S1 1624 aa21.21■□□□□ 0.99
SOX2-OT-211ENST00000490005 ANKRD50Q9ULJ7 1429 aa21.2■□□□□ 0.98
SOX2-OT-211ENST00000490005 VWDEQ8N2E2 1590 aa21.19■□□□□ 0.98
SOX2-OT-211ENST00000490005 UGGT1Q9NYU2 1555 aa21.19■□□□□ 0.98
SOX2-OT-211ENST00000490005 PKD2Q13563 968 aa21.19■□□□□ 0.98
SOX2-OT-211ENST00000490005 NEURL4Q96JN8 1562 aa21.19■□□□□ 0.98
SOX2-OT-211ENST00000490005 ARHGAP31Q2M1Z3 1444 aa21.18■□□□□ 0.98
SOX2-OT-211ENST00000490005 KANK1Q14678 1352 aa21.16■□□□□ 0.98
SOX2-OT-211ENST00000490005 LMTK2Q8IWU2 1503 aa21.14■□□□□ 0.98
SOX2-OT-211ENST00000490005 THEMISQ8N1K5 641 aaPredicted RBP21.13■□□□□ 0.97
SOX2-OT-211ENST00000490005 ROCK1Q13464 1354 aa21.11■□□□□ 0.97
SOX2-OT-211ENST00000490005 EFCAB6Q5THR3 1501 aa21.11■□□□□ 0.97
SOX2-OT-211ENST00000490005 ANKLE2Q86XL3 938 aa21.1■□□□□ 0.97
SOX2-OT-211ENST00000490005 SYNMO15061 1565 aa21.1■□□□□ 0.97
SOX2-OT-211ENST00000490005 NPHP4O75161 1426 aaPredicted RBP21.08■□□□□ 0.97
SOX2-OT-211ENST00000490005 RRBP1Q9P2E9 1410 aaKnown RBP21.08■□□□□ 0.97
SOX2-OT-211ENST00000490005 CFAP65Q6ZU64 1925 aaKnown RBP21.08■□□□□ 0.96
SOX2-OT-211ENST00000490005 IDI1Q13907 227 aa21.07■□□□□ 0.96
SOX2-OT-211ENST00000490005 POLR1AO95602 1720 aaPredicted RBP21.07■□□□□ 0.96
SOX2-OT-211ENST00000490005 UBR1Q8IWV7 1749 aa21.07■□□□□ 0.96
SOX2-OT-211ENST00000490005 NOS1P29475 1434 aa21.06■□□□□ 0.96
SOX2-OT-211ENST00000490005 LTKP29376 864 aa21.06■□□□□ 0.96
SOX2-OT-211ENST00000490005 PIK3C2BO00750 1634 aa21.05■□□□□ 0.96
SOX2-OT-211ENST00000490005 UNC13BO14795 1591 aa21.05■□□□□ 0.96
SOX2-OT-211ENST00000490005 MED14O60244 1454 aa21.04■□□□□ 0.96
SOX2-OT-211ENST00000490005 ARHGAP23Q9P227 1491 aa21.03■□□□□ 0.96
SOX2-OT-211ENST00000490005 SCAF11Q99590 1463 aaKnown RBP21.01■□□□□ 0.95
SOX2-OT-211ENST00000490005 SLIT1O75093 1534 aa20.99■□□□□ 0.95
SOX2-OT-211ENST00000490005 NUP155O75694 1391 aa20.99■□□□□ 0.95
SOX2-OT-211ENST00000490005 TXNDC2Q86VQ3 553 aa20.99■□□□□ 0.95
SOX2-OT-211ENST00000490005 TET3O43151 1660 aa20.99■□□□□ 0.95
SOX2-OT-211ENST00000490005 IQGAP1P46940 1657 aa20.99■□□□□ 0.95
SOX2-OT-211ENST00000490005 TMEM2Q9UHN6 1383 aa20.98■□□□□ 0.95
SOX2-OT-211ENST00000490005 SENP3Q9H4L4 574 aaPredicted RBP20.98■□□□□ 0.95
SOX2-OT-211ENST00000490005 STAG3Q9UJ98 1225 aa20.98■□□□□ 0.95
SOX2-OT-211ENST00000490005 RPRD2Q5VT52 1461 aaKnown RBP20.96■□□□□ 0.95
SOX2-OT-211ENST00000490005 IQSEC2Q5JU85 1478 aa20.95■□□□□ 0.94
SOX2-OT-211ENST00000490005 ADGRB3O60242 1522 aa20.95■□□□□ 0.94
SOX2-OT-211ENST00000490005 IQGAP3Q86VI3 1631 aa20.95■□□□□ 0.94
SOX2-OT-211ENST00000490005 NAIPQ13075 1403 aa20.95■□□□□ 0.94
SOX2-OT-211ENST00000490005 E9PCH4 1651 aa20.94■□□□□ 0.94
SOX2-OT-211ENST00000490005 UBAP1LF5GYI3 381 aa20.93■□□□□ 0.94
SOX2-OT-211ENST00000490005 CPS1P31327 1500 aa20.91■□□□□ 0.94
SOX2-OT-211ENST00000490005 GCC2Q8IWJ2 1684 aa20.91■□□□□ 0.94
SOX2-OT-211ENST00000490005 SLC52A1Q9NWF4 448 aa20.91■□□□□ 0.94
SOX2-OT-211ENST00000490005 EID1Q9Y6B2 187 aa20.91■□□□□ 0.94
SOX2-OT-211ENST00000490005 STRCP1A6NGW2 1772 aa20.9■□□□□ 0.94
SOX2-OT-211ENST00000490005 CHGAP10645 457 aaKnown RBP20.88■□□□□ 0.93
SOX2-OT-211ENST00000490005 SLC26A8Q96RN1 970 aa20.88■□□□□ 0.93
SOX2-OT-211ENST00000490005 ZFYVE9O95405 1425 aa20.87■□□□□ 0.93
SOX2-OT-211ENST00000490005 NUTM2DQ5VT03 806 aaPredicted RBP20.87■□□□□ 0.93
SOX2-OT-211ENST00000490005 LRRC7Q96NW7 1537 aa20.87■□□□□ 0.93
SOX2-OT-211ENST00000490005 KDM5AP29375 1690 aaKnown RBP20.86■□□□□ 0.93
SOX2-OT-211ENST00000490005 HFM1A2PYH4 1435 aa20.86■□□□□ 0.93
SOX2-OT-211ENST00000490005 TMEM131LA2VDJ0 1609 aa20.86■□□□□ 0.93
SOX2-OT-211ENST00000490005 RIMS2Q9UQ26 1411 aa20.85■□□□□ 0.93
SOX2-OT-211ENST00000490005 ALKQ9UM73 1620 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms