RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 MLECQ14165 292 aa24.12■■□□□ 1.45
CLIC4-203ENST00000489758 GGT6Q6P531 493 aa24.12■■□□□ 1.45
CLIC4-203ENST00000489758 DEPDC5O75140 1603 aa24.11■■□□□ 1.45
CLIC4-203ENST00000489758 PRDM15P57071 1507 aaPredicted RBP24.1■■□□□ 1.45
CLIC4-203ENST00000489758 PCGF6Q9BYE7 350 aa24.1■■□□□ 1.45
CLIC4-203ENST00000489758 RAB3GAP2Q9H2M9 1393 aa24.1■■□□□ 1.45
CLIC4-203ENST00000489758 UNC13BO14795 1591 aa24.08■■□□□ 1.45
CLIC4-203ENST00000489758 PPP6R1Q9UPN7 881 aa24.06■■□□□ 1.44
CLIC4-203ENST00000489758 VWDEQ8N2E2 1590 aa24.06■■□□□ 1.44
CLIC4-203ENST00000489758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.05■■□□□ 1.443e-6■■□□□ 11.6
CLIC4-203ENST00000489758 ADAMTSL3P82987 1691 aa24.05■■□□□ 1.44
CLIC4-203ENST00000489758 KDM5DQ9BY66 1539 aa24.05■■□□□ 1.44
CLIC4-203ENST00000489758 HRCP23327 699 aa24.04■■□□□ 1.44
CLIC4-203ENST00000489758 FAM135AQ9P2D6 1515 aa24.03■■□□□ 1.44
CLIC4-203ENST00000489758 ABCC3O15438 1527 aa24.02■■□□□ 1.44
CLIC4-203ENST00000489758 NUP155O75694 1391 aa24.02■■□□□ 1.44
CLIC4-203ENST00000489758 KANK1Q14678 1352 aa24.01■■□□□ 1.43
CLIC4-203ENST00000489758 WASHC2CQ9Y4E1 1318 aa24■■□□□ 1.43
CLIC4-203ENST00000489758 LMTK2Q8IWU2 1503 aa24■■□□□ 1.43
CLIC4-203ENST00000489758 MADDQ8WXG6 1647 aa23.99■■□□□ 1.43
CLIC4-203ENST00000489758 CNTLNQ9NXG0 1405 aa23.98■■□□□ 1.43
CLIC4-203ENST00000489758 PZPP20742 1482 aa23.97■■□□□ 1.43
CLIC4-203ENST00000489758 IQGAP3Q86VI3 1631 aa23.97■■□□□ 1.43
CLIC4-203ENST00000489758 ACIN1Q9UKV3 1341 aaKnown RBP23.97■■□□□ 1.43
CLIC4-203ENST00000489758 TRIM52Q96A61 297 aa23.96■■□□□ 1.43
CLIC4-203ENST00000489758 ZC3H13Q5T200 1668 aaKnown RBP23.95■■□□□ 1.43
CLIC4-203ENST00000489758 ESF1Q9H501 851 aaKnown RBP23.94■■□□□ 1.42
CLIC4-203ENST00000489758 FER1L4A9Z1Z3 1794 aa23.93■■□□□ 1.42
CLIC4-203ENST00000489758 CLTCQ00610 1675 aaKnown RBP23.93■■□□□ 1.42
CLIC4-203ENST00000489758 ZMYM3Q14202 1370 aa23.92■■□□□ 1.42
CLIC4-203ENST00000489758 CEP152O94986 1710 aa23.91■■□□□ 1.42
CLIC4-203ENST00000489758 EFCAB6Q5THR3 1501 aa23.9■■□□□ 1.42
CLIC4-203ENST00000489758 ARHGAP31Q2M1Z3 1444 aa23.9■■□□□ 1.42
CLIC4-203ENST00000489758 MROH2AA6NES4 1674 aa23.89■■□□□ 1.42
CLIC4-203ENST00000489758 RIMS1Q86UR5 1692 aaKnown RBP23.89■■□□□ 1.42
CLIC4-203ENST00000489758 CAMSAP1Q5T5Y3 1602 aa23.89■■□□□ 1.42
CLIC4-203ENST00000489758 PTPRMP28827 1452 aa23.88■■□□□ 1.41
CLIC4-203ENST00000489758 NPATQ14207 1427 aa23.88■■□□□ 1.41
CLIC4-203ENST00000489758 MPHOSPH9Q99550 1183 aa23.88■■□□□ 1.41
CLIC4-203ENST00000489758 TET3O43151 1660 aa23.88■■□□□ 1.41
CLIC4-203ENST00000489758 SLC4A1APQ9BWU0 796 aaKnown RBP23.87■■□□□ 1.41
CLIC4-203ENST00000489758 CEBPAP49715 358 aaPredicted RBP23.85■■□□□ 1.41
CLIC4-203ENST00000489758 RPRD2Q5VT52 1461 aaKnown RBP23.83■■□□□ 1.41
CLIC4-203ENST00000489758 PKD2Q13563 968 aa23.83■■□□□ 1.41
CLIC4-203ENST00000489758 FBXO31Q5XUX0 539 aaPredicted RBP23.82■■□□□ 1.4
CLIC4-203ENST00000489758 C3P01024 1663 aa23.82■■□□□ 1.4
CLIC4-203ENST00000489758 E9PCH4 1651 aa23.8■■□□□ 1.4
CLIC4-203ENST00000489758 ILDR1Q86SU0 546 aaPredicted RBP23.8■■□□□ 1.4
CLIC4-203ENST00000489758 ERVK-7P63135 1459 aa23.79■■□□□ 1.4
CLIC4-203ENST00000489758 NOS1P29475 1434 aa23.78■■□□□ 1.4
CLIC4-203ENST00000489758 SPATA31D1Q6ZQQ2 1576 aa23.78■■□□□ 1.4
CLIC4-203ENST00000489758 FOXD1Q16676 465 aa23.77■■□□□ 1.4
CLIC4-203ENST00000489758 DHX57Q6P158 1386 aaKnown RBP23.77■■□□□ 1.4
CLIC4-203ENST00000489758 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
CLIC4-203ENST00000489758 PTPRTO14522 1441 aa23.76■■□□□ 1.39
CLIC4-203ENST00000489758 PLA2R1Q13018 1463 aa23.75■■□□□ 1.39
CLIC4-203ENST00000489758 PREX1Q8TCU6 1659 aa23.73■■□□□ 1.39
CLIC4-203ENST00000489758 TNRQ92752 1358 aa23.72■■□□□ 1.39
CLIC4-203ENST00000489758 SYNMO15061 1565 aa23.72■■□□□ 1.39
CLIC4-203ENST00000489758 TRPM2O94759 1503 aa23.69■■□□□ 1.38
CLIC4-203ENST00000489758 ANKRD30BQ9BXX2 1392 aa23.68■■□□□ 1.38
CLIC4-203ENST00000489758 UGGT1Q9NYU2 1555 aa23.65■■□□□ 1.38
CLIC4-203ENST00000489758 SPHKAPQ2M3C7 1700 aa23.64■■□□□ 1.38
CLIC4-203ENST00000489758 NLRP1Q9C000 1473 aa23.63■■□□□ 1.37
CLIC4-203ENST00000489758 IDI1Q13907 227 aa23.63■■□□□ 1.37
CLIC4-203ENST00000489758 PIK3C2BO00750 1634 aa23.62■■□□□ 1.37
CLIC4-203ENST00000489758 SLC52A1Q9NWF4 448 aa23.62■■□□□ 1.37
CLIC4-203ENST00000489758 MYO3AQ8NEV4 1616 aa23.62■■□□□ 1.37
CLIC4-203ENST00000489758 CLTCL1P53675 1640 aa23.6■■□□□ 1.37
CLIC4-203ENST00000489758 CCDC144AA2RUR9 1427 aa23.59■■□□□ 1.37
CLIC4-203ENST00000489758 UHRF1BP1Q6BDS2 1440 aa23.59■■□□□ 1.37
CLIC4-203ENST00000489758 A2ML1A8K2U0 1454 aa23.57■■□□□ 1.36
CLIC4-203ENST00000489758 LMTK3Q96Q04 1460 aa23.56■■□□□ 1.36
CLIC4-203ENST00000489758 CEP170BQ9Y4F5 1589 aaPredicted RBP23.56■■□□□ 1.36
CLIC4-203ENST00000489758 CFAP65Q6ZU64 1925 aaKnown RBP23.55■■□□□ 1.36
CLIC4-203ENST00000489758 ZNF142P52746 1687 aaPredicted RBP23.54■■□□□ 1.36
CLIC4-203ENST00000489758 ADGRB3O60242 1522 aa23.53■■□□□ 1.36
CLIC4-203ENST00000489758 TMEM131LA2VDJ0 1609 aa23.51■■□□□ 1.35
CLIC4-203ENST00000489758 SPATA31E1Q6ZUB1 1445 aa23.5■■□□□ 1.35
CLIC4-203ENST00000489758 HSPA2P54652 639 aa23.5■■□□□ 1.35
CLIC4-203ENST00000489758 CCER1Q8TC90 406 aaPredicted RBP23.5■■□□□ 1.35
CLIC4-203ENST00000489758 CLSPNQ9HAW4 1339 aa23.5■■□□□ 1.35
CLIC4-203ENST00000489758 SIN3AQ96ST3 1273 aa23.49■■□□□ 1.35
CLIC4-203ENST00000489758 UBR1Q8IWV7 1749 aa23.48■■□□□ 1.35
CLIC4-203ENST00000489758 SETD1BQ9UPS6 1966 aaKnown RBP23.48■■□□□ 1.35
CLIC4-203ENST00000489758 KDM5AP29375 1690 aaKnown RBP23.48■■□□□ 1.35
CLIC4-203ENST00000489758 CHGAP10645 457 aaKnown RBP23.46■■□□□ 1.35
CLIC4-203ENST00000489758 NEURL4Q96JN8 1562 aa23.46■■□□□ 1.35
CLIC4-203ENST00000489758 STAG3Q9UJ98 1225 aa23.46■■□□□ 1.35
CLIC4-203ENST00000489758 THEMISQ8N1K5 641 aaPredicted RBP23.45■■□□□ 1.34
CLIC4-203ENST00000489758 TMEM2Q9UHN6 1383 aa23.43■■□□□ 1.34
CLIC4-203ENST00000489758 FBXO41Q8TF61 875 aa23.43■■□□□ 1.34
CLIC4-203ENST00000489758 ARHGAP23Q9P227 1491 aa23.43■■□□□ 1.34
CLIC4-203ENST00000489758 SLIT1O75093 1534 aa23.42■■□□□ 1.34
CLIC4-203ENST00000489758 NEUROD1Q13562 356 aa23.41■■□□□ 1.34
CLIC4-203ENST00000489758 ZFYVE9O95405 1425 aa23.41■■□□□ 1.34
CLIC4-203ENST00000489758 RGL3Q3MIN7 710 aa23.39■■□□□ 1.33
CLIC4-203ENST00000489758 KIF1BO60333 1816 aa23.38■■□□□ 1.33
CLIC4-203ENST00000489758 RIMS2Q9UQ26 1411 aa23.37■■□□□ 1.33
CLIC4-203ENST00000489758 ZNF326Q5BKZ1 582 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms