RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 ZC3H13Q5T200 1668 aaKnown RBP16.89■□□□□ 0.29
CPSF7-212ENST00000489728 KIF3BO15066 747 aa16.89■□□□□ 0.29
CPSF7-212ENST00000489728 ESF1Q9H501 851 aaKnown RBP16.89■□□□□ 0.29
CPSF7-212ENST00000489728 DEPDC5O75140 1603 aa16.88■□□□□ 0.29
CPSF7-212ENST00000489728 PRDM15P57071 1507 aaPredicted RBP16.88■□□□□ 0.29
CPSF7-212ENST00000489728 RRP7BPQ9NSQ0 103 aa16.88■□□□□ 0.29
CPSF7-212ENST00000489728 MROH1Q8NDA8 1641 aa16.87■□□□□ 0.29
CPSF7-212ENST00000489728 C3P01024 1663 aa16.86■□□□□ 0.29
CPSF7-212ENST00000489728 CLTCQ00610 1675 aaKnown RBP16.86■□□□□ 0.29
CPSF7-212ENST00000489728 GGT6Q6P531 493 aa16.86■□□□□ 0.29
CPSF7-212ENST00000489728 CHIC2Q9UKJ5 165 aa16.86■□□□□ 0.29
CPSF7-212ENST00000489728 ANKRD50Q9ULJ7 1429 aa16.85■□□□□ 0.29
CPSF7-212ENST00000489728 NPATQ14207 1427 aa16.84■□□□□ 0.29
CPSF7-212ENST00000489728 ABCC3O15438 1527 aa16.82■□□□□ 0.28
CPSF7-212ENST00000489728 ZMYM3Q14202 1370 aa16.81■□□□□ 0.28
CPSF7-212ENST00000489728 VWDEQ8N2E2 1590 aa16.81■□□□□ 0.28
CPSF7-212ENST00000489728 GCC2Q8IWJ2 1684 aa16.8■□□□□ 0.28
CPSF7-212ENST00000489728 UNC13BO14795 1591 aa16.8■□□□□ 0.28
CPSF7-212ENST00000489728 LMTK2Q8IWU2 1503 aa16.8■□□□□ 0.28
CPSF7-212ENST00000489728 KANK1Q14678 1352 aa16.79■□□□□ 0.28
CPSF7-212ENST00000489728 PREX1Q8TCU6 1659 aa16.79■□□□□ 0.28
CPSF7-212ENST00000489728 WASHC2CQ9Y4E1 1318 aa16.79■□□□□ 0.28
CPSF7-212ENST00000489728 PZPP20742 1482 aa16.79■□□□□ 0.28
CPSF7-212ENST00000489728 SETD1BQ9UPS6 1966 aaKnown RBP16.78■□□□□ 0.28
CPSF7-212ENST00000489728 ITGAEP38570 1179 aa16.78■□□□□ 0.28
CPSF7-212ENST00000489728 HFM1A2PYH4 1435 aa16.78■□□□□ 0.28
CPSF7-212ENST00000489728 CAMSAP1Q5T5Y3 1602 aa16.78■□□□□ 0.28
CPSF7-212ENST00000489728 ARHGAP31Q2M1Z3 1444 aa16.77■□□□□ 0.27
CPSF7-212ENST00000489728 CEP152O94986 1710 aa16.76■□□□□ 0.27
CPSF7-212ENST00000489728 NAIPQ13075 1403 aa16.75■□□□□ 0.27
CPSF7-212ENST00000489728 LMTK3Q96Q04 1460 aa16.74■□□□□ 0.27
CPSF7-212ENST00000489728 CEBPAP49715 358 aaPredicted RBP16.74■□□□□ 0.27
CPSF7-212ENST00000489728 UHRF1BP1Q6BDS2 1440 aa16.73■□□□□ 0.27
CPSF7-212ENST00000489728 EFCAB6Q5THR3 1501 aa16.72■□□□□ 0.27
CPSF7-212ENST00000489728 IQGAP3Q86VI3 1631 aa16.72■□□□□ 0.27
CPSF7-212ENST00000489728 SPATA31D1Q6ZQQ2 1576 aa16.72■□□□□ 0.27
CPSF7-212ENST00000489728 ZNF142P52746 1687 aaPredicted RBP16.72■□□□□ 0.27
CPSF7-212ENST00000489728 TET3O43151 1660 aa16.71■□□□□ 0.27
CPSF7-212ENST00000489728 MYO3AQ8NEV4 1616 aa16.7■□□□□ 0.26
CPSF7-212ENST00000489728 RPRD2Q5VT52 1461 aaKnown RBP16.7■□□□□ 0.26
CPSF7-212ENST00000489728 ACIN1Q9UKV3 1341 aaKnown RBP16.7■□□□□ 0.26
CPSF7-212ENST00000489728 ERVK-7P63135 1459 aa16.68■□□□□ 0.26
CPSF7-212ENST00000489728 NLRP1Q9C000 1473 aa16.68■□□□□ 0.26
CPSF7-212ENST00000489728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.68■□□□□ 0.264e-11■□□□□ 9.4
CPSF7-212ENST00000489728 TNRQ92752 1358 aa16.67■□□□□ 0.26
CPSF7-212ENST00000489728 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
CPSF7-212ENST00000489728 CEP170BQ9Y4F5 1589 aaPredicted RBP16.66■□□□□ 0.26
CPSF7-212ENST00000489728 NUP155O75694 1391 aa16.64■□□□□ 0.26
CPSF7-212ENST00000489728 A2ML1A8K2U0 1454 aa16.64■□□□□ 0.25
CPSF7-212ENST00000489728 FBXO31Q5XUX0 539 aaPredicted RBP16.62■□□□□ 0.25
CPSF7-212ENST00000489728 NOS1P29475 1434 aa16.62■□□□□ 0.25
CPSF7-212ENST00000489728 E9PCH4 1651 aa16.6■□□□□ 0.25
CPSF7-212ENST00000489728 KDM5AP29375 1690 aaKnown RBP16.6■□□□□ 0.25
CPSF7-212ENST00000489728 SETD5Q9C0A6 1442 aa16.6■□□□□ 0.25
CPSF7-212ENST00000489728 PLA2R1Q13018 1463 aa16.6■□□□□ 0.25
CPSF7-212ENST00000489728 SYNMO15061 1565 aa16.58■□□□□ 0.24
CPSF7-212ENST00000489728 UGGT1Q9NYU2 1555 aa16.57■□□□□ 0.24
CPSF7-212ENST00000489728 CFAP65Q6ZU64 1925 aaKnown RBP16.55■□□□□ 0.24
CPSF7-212ENST00000489728 SLC52A1Q9NWF4 448 aa16.55■□□□□ 0.24
CPSF7-212ENST00000489728 PIK3C2BO00750 1634 aa16.55■□□□□ 0.24
CPSF7-212ENST00000489728 UBR1Q8IWV7 1749 aa16.54■□□□□ 0.24
CPSF7-212ENST00000489728 HRCP23327 699 aa16.54■□□□□ 0.24
CPSF7-212ENST00000489728 HSPA2P54652 639 aa16.54■□□□□ 0.24
CPSF7-212ENST00000489728 SPHKAPQ2M3C7 1700 aa16.53■□□□□ 0.24
CPSF7-212ENST00000489728 THEMISQ8N1K5 641 aaPredicted RBP16.53■□□□□ 0.24
CPSF7-212ENST00000489728 STRCQ7RTU9 1775 aa16.53■□□□□ 0.24
CPSF7-212ENST00000489728 PTPRTO14522 1441 aa16.53■□□□□ 0.24
CPSF7-212ENST00000489728 RAB3GAP2Q9H2M9 1393 aa16.52■□□□□ 0.24
CPSF7-212ENST00000489728 ADGRB3O60242 1522 aa16.52■□□□□ 0.24
CPSF7-212ENST00000489728 TRIM52Q96A61 297 aa16.52■□□□□ 0.24
CPSF7-212ENST00000489728 TRPM2O94759 1503 aa16.5■□□□□ 0.23
CPSF7-212ENST00000489728 PKD2Q13563 968 aa16.5■□□□□ 0.23
CPSF7-212ENST00000489728 DMRT2Q9Y5R5 561 aa16.5■□□□□ 0.23
CPSF7-212ENST00000489728 POLR1AO95602 1720 aaPredicted RBP16.5■□□□□ 0.23
CPSF7-212ENST00000489728 SLIT1O75093 1534 aa16.5■□□□□ 0.23
CPSF7-212ENST00000489728 SLC4A1APQ9BWU0 796 aaKnown RBP16.49■□□□□ 0.23
CPSF7-212ENST00000489728 ARHGAP23Q9P227 1491 aa16.48■□□□□ 0.23
CPSF7-212ENST00000489728 IDI1Q13907 227 aa16.47■□□□□ 0.23
CPSF7-212ENST00000489728 TMEM131LA2VDJ0 1609 aa16.46■□□□□ 0.23
CPSF7-212ENST00000489728 MED14O60244 1454 aa16.45■□□□□ 0.22
CPSF7-212ENST00000489728 NEURL4Q96JN8 1562 aa16.44■□□□□ 0.22
CPSF7-212ENST00000489728 TMEM2Q9UHN6 1383 aa16.44■□□□□ 0.22
CPSF7-212ENST00000489728 TRIM26Q12899 539 aaPredicted RBP16.44■□□□□ 0.22
CPSF7-212ENST00000489728 ANKLE2Q86XL3 938 aa16.44■□□□□ 0.22
CPSF7-212ENST00000489728 MPHOSPH9Q99550 1183 aa16.44■□□□□ 0.22
CPSF7-212ENST00000489728 STAG3Q9UJ98 1225 aa16.43■□□□□ 0.22
CPSF7-212ENST00000489728 SCAF11Q99590 1463 aaKnown RBP16.42■□□□□ 0.22
CPSF7-212ENST00000489728 CLTCL1P53675 1640 aa16.41■□□□□ 0.22
CPSF7-212ENST00000489728 NCKAP5LQ9HCH0 1330 aa16.4■□□□□ 0.22
CPSF7-212ENST00000489728 IQGAP1P46940 1657 aa16.4■□□□□ 0.22
CPSF7-212ENST00000489728 ZFYVE9O95405 1425 aa16.39■□□□□ 0.21
CPSF7-212ENST00000489728 EID1Q9Y6B2 187 aa16.39■□□□□ 0.21
CPSF7-212ENST00000489728 KIF1BO60333 1816 aa16.39■□□□□ 0.21
CPSF7-212ENST00000489728 MYO5BQ9ULV0 1848 aa16.39■□□□□ 0.21
CPSF7-212ENST00000489728 NPHP4O75161 1426 aaPredicted RBP16.38■□□□□ 0.21
CPSF7-212ENST00000489728 CCDC144AA2RUR9 1427 aa16.37■□□□□ 0.21
CPSF7-212ENST00000489728 HDGFP51858 240 aaKnown RBP16.37■□□□□ 0.21
CPSF7-212ENST00000489728 RIMS2Q9UQ26 1411 aa16.36■□□□□ 0.21
CPSF7-212ENST00000489728 TXNDC2Q86VQ3 553 aa16.35■□□□□ 0.21
CPSF7-212ENST00000489728 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms