RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.22■□□□□ 0.99
CLDN11-209ENST00000489485 TRIM52Q96A61 297 aa21.18■□□□□ 0.98
CLDN11-209ENST00000489485 RNF17Q9BXT8 1623 aaKnown RBP21.18■□□□□ 0.98
CLDN11-209ENST00000489485 DEPDC5O75140 1603 aa21.18■□□□□ 0.98
CLDN11-209ENST00000489485 UNC13BO14795 1591 aa21.15■□□□□ 0.98
CLDN11-209ENST00000489485 MROH1Q8NDA8 1641 aa21.15■□□□□ 0.98
CLDN11-209ENST00000489485 NUP155O75694 1391 aa21.15■□□□□ 0.98
CLDN11-209ENST00000489485 KANK1Q14678 1352 aa21.15■□□□□ 0.98
CLDN11-209ENST00000489485 PRDM15P57071 1507 aaPredicted RBP21.14■□□□□ 0.98
CLDN11-209ENST00000489485 ESF1Q9H501 851 aaKnown RBP21.14■□□□□ 0.97
CLDN11-209ENST00000489485 WASHC2CQ9Y4E1 1318 aa21.14■□□□□ 0.97
CLDN11-209ENST00000489485 HRCP23327 699 aa21.12■□□□□ 0.97
CLDN11-209ENST00000489485 ACIN1Q9UKV3 1341 aaKnown RBP21.11■□□□□ 0.97
CLDN11-209ENST00000489485 PPP6R1Q9UPN7 881 aa21.11■□□□□ 0.97
CLDN11-209ENST00000489485 FER1L4A9Z1Z3 1794 aa21.1■□□□□ 0.97
CLDN11-209ENST00000489485 CEP152O94986 1710 aa21.09■□□□□ 0.97
CLDN11-209ENST00000489485 CLTCQ00610 1675 aaKnown RBP21.08■□□□□ 0.97
CLDN11-209ENST00000489485 KDM5DQ9BY66 1539 aa21.08■□□□□ 0.97
CLDN11-209ENST00000489485 IQGAP3Q86VI3 1631 aa21.07■□□□□ 0.96
CLDN11-209ENST00000489485 FAM135AQ9P2D6 1515 aa21.07■□□□□ 0.96
CLDN11-209ENST00000489485 ADAMTSL3P82987 1691 aa21.07■□□□□ 0.96
CLDN11-209ENST00000489485 ZC3H13Q5T200 1668 aaKnown RBP21.07■□□□□ 0.96
CLDN11-209ENST00000489485 VWDEQ8N2E2 1590 aa21.07■□□□□ 0.96
CLDN11-209ENST00000489485 MADDQ8WXG6 1647 aa21.06■□□□□ 0.96
CLDN11-209ENST00000489485 ABCC3O15438 1527 aa21.06■□□□□ 0.96
CLDN11-209ENST00000489485 SLC4A1APQ9BWU0 796 aaKnown RBP21.06■□□□□ 0.96
CLDN11-209ENST00000489485 PZPP20742 1482 aa21.03■□□□□ 0.96
CLDN11-209ENST00000489485 RIMS1Q86UR5 1692 aaKnown RBP21.03■□□□□ 0.96
CLDN11-209ENST00000489485 CNTLNQ9NXG0 1405 aa21.03■□□□□ 0.96
CLDN11-209ENST00000489485 MPHOSPH9Q99550 1183 aa21.03■□□□□ 0.96
CLDN11-209ENST00000489485 CAMSAP1Q5T5Y3 1602 aa21.02■□□□□ 0.96
CLDN11-209ENST00000489485 TET3O43151 1660 aa21.02■□□□□ 0.95
CLDN11-209ENST00000489485 LMTK2Q8IWU2 1503 aa21.01■□□□□ 0.95
CLDN11-209ENST00000489485 CFAP65Q6ZU64 1925 aaKnown RBP21.01■□□□□ 0.95
CLDN11-209ENST00000489485 PLPPR3Q6T4P5 718 aa21.01■□□□□ 0.95
CLDN11-209ENST00000489485 ZMYM3Q14202 1370 aa21■□□□□ 0.95
CLDN11-209ENST00000489485 MROH2AA6NES4 1674 aa20.99■□□□□ 0.95
CLDN11-209ENST00000489485 KDM4FA0A1W2PPD8 638 aa20.98■□□□□ 0.95
CLDN11-209ENST00000489485 PKD2Q13563 968 aa20.98■□□□□ 0.95
CLDN11-209ENST00000489485 EFCAB6Q5THR3 1501 aa20.98■□□□□ 0.95
CLDN11-209ENST00000489485 E9PCH4 1651 aa20.97■□□□□ 0.95
CLDN11-209ENST00000489485 CEBPAP49715 358 aaPredicted RBP20.96■□□□□ 0.95
CLDN11-209ENST00000489485 C3P01024 1663 aa20.96■□□□□ 0.95
CLDN11-209ENST00000489485 FOXD1Q16676 465 aa20.96■□□□□ 0.95
CLDN11-209ENST00000489485 NPATQ14207 1427 aa20.95■□□□□ 0.94
CLDN11-209ENST00000489485 ARHGAP31Q2M1Z3 1444 aa20.94■□□□□ 0.94
CLDN11-209ENST00000489485 CCER1Q8TC90 406 aaPredicted RBP20.93■□□□□ 0.94
CLDN11-209ENST00000489485 PTPRMP28827 1452 aa20.93■□□□□ 0.94
CLDN11-209ENST00000489485 FBXO31Q5XUX0 539 aaPredicted RBP20.92■□□□□ 0.94
CLDN11-209ENST00000489485 DHX57Q6P158 1386 aaKnown RBP20.92■□□□□ 0.94
CLDN11-209ENST00000489485 RPRD2Q5VT52 1461 aaKnown RBP20.91■□□□□ 0.94
CLDN11-209ENST00000489485 PREX1Q8TCU6 1659 aa20.89■□□□□ 0.93
CLDN11-209ENST00000489485 SPHKAPQ2M3C7 1700 aa20.87■□□□□ 0.93
CLDN11-209ENST00000489485 ERVK-7P63135 1459 aa20.86■□□□□ 0.93
CLDN11-209ENST00000489485 SPATA31D1Q6ZQQ2 1576 aa20.84■□□□□ 0.93
CLDN11-209ENST00000489485 NOS1P29475 1434 aa20.83■□□□□ 0.92
CLDN11-209ENST00000489485 TNRQ92752 1358 aa20.81■□□□□ 0.92
CLDN11-209ENST00000489485 PTPRTO14522 1441 aa20.81■□□□□ 0.92
CLDN11-209ENST00000489485 SYNMO15061 1565 aa20.81■□□□□ 0.92
CLDN11-209ENST00000489485 PLA2R1Q13018 1463 aa20.81■□□□□ 0.92
CLDN11-209ENST00000489485 ANKRD30BQ9BXX2 1392 aa20.8■□□□□ 0.92
CLDN11-209ENST00000489485 SETD1BQ9UPS6 1966 aaKnown RBP20.8■□□□□ 0.92
CLDN11-209ENST00000489485 TRPM2O94759 1503 aa20.8■□□□□ 0.92
CLDN11-209ENST00000489485 UGGT1Q9NYU2 1555 aa20.79■□□□□ 0.92
CLDN11-209ENST00000489485 CCDC144AA2RUR9 1427 aa20.78■□□□□ 0.92
CLDN11-209ENST00000489485 SLC52A1Q9NWF4 448 aa20.77■□□□□ 0.92
CLDN11-209ENST00000489485 IDI1Q13907 227 aa20.76■□□□□ 0.91
CLDN11-209ENST00000489485 CLTCL1P53675 1640 aa20.75■□□□□ 0.91
CLDN11-209ENST00000489485 MYO3AQ8NEV4 1616 aa20.74■□□□□ 0.91
CLDN11-209ENST00000489485 PIK3C2BO00750 1634 aa20.74■□□□□ 0.91
CLDN11-209ENST00000489485 CHGAP10645 457 aaKnown RBP20.73■□□□□ 0.91
CLDN11-209ENST00000489485 SIN3AQ96ST3 1273 aa20.73■□□□□ 0.91
CLDN11-209ENST00000489485 STAG3Q9UJ98 1225 aa20.73■□□□□ 0.91
CLDN11-209ENST00000489485 NLRP1Q9C000 1473 aa20.73■□□□□ 0.91
CLDN11-209ENST00000489485 NEUROD1Q13562 356 aa20.72■□□□□ 0.91
CLDN11-209ENST00000489485 CLSPNQ9HAW4 1339 aa20.72■□□□□ 0.91
CLDN11-209ENST00000489485 KIF1BO60333 1816 aa20.71■□□□□ 0.91
CLDN11-209ENST00000489485 UHRF1BP1Q6BDS2 1440 aa20.7■□□□□ 0.91
CLDN11-209ENST00000489485 CEP170BQ9Y4F5 1589 aaPredicted RBP20.68■□□□□ 0.9
CLDN11-209ENST00000489485 A2ML1A8K2U0 1454 aa20.67■□□□□ 0.9
CLDN11-209ENST00000489485 MYO5BQ9ULV0 1848 aa20.67■□□□□ 0.9
CLDN11-209ENST00000489485 RGL3Q3MIN7 710 aa20.66■□□□□ 0.9
CLDN11-209ENST00000489485 TMEM131LA2VDJ0 1609 aa20.65■□□□□ 0.9
CLDN11-209ENST00000489485 ZNF142P52746 1687 aaPredicted RBP20.65■□□□□ 0.9
CLDN11-209ENST00000489485 UBR1Q8IWV7 1749 aa20.65■□□□□ 0.9
CLDN11-209ENST00000489485 ZNF326Q5BKZ1 582 aaKnown RBP20.65■□□□□ 0.9
CLDN11-209ENST00000489485 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
CLDN11-209ENST00000489485 ADGRB3O60242 1522 aa20.65■□□□□ 0.9
CLDN11-209ENST00000489485 KDM5AP29375 1690 aaKnown RBP20.63■□□□□ 0.89
CLDN11-209ENST00000489485 THEMISQ8N1K5 641 aaPredicted RBP20.62■□□□□ 0.89
CLDN11-209ENST00000489485 SPATA31E1Q6ZUB1 1445 aa20.61■□□□□ 0.89
CLDN11-209ENST00000489485 LMTK3Q96Q04 1460 aa20.6■□□□□ 0.89
CLDN11-209ENST00000489485 HSPA2P54652 639 aa20.57■□□□□ 0.88
CLDN11-209ENST00000489485 TONSLQ96HA7 1378 aa20.57■□□□□ 0.88
CLDN11-209ENST00000489485 NEURL4Q96JN8 1562 aa20.57■□□□□ 0.88
CLDN11-209ENST00000489485 TMEM2Q9UHN6 1383 aa20.56■□□□□ 0.88
CLDN11-209ENST00000489485 NUTM2DQ5VT03 806 aaPredicted RBP20.55■□□□□ 0.88
CLDN11-209ENST00000489485 DCAF11Q8TEB1 546 aa20.54■□□□□ 0.88
CLDN11-209ENST00000489485 L3MBTL2Q969R5 705 aa20.54■□□□□ 0.88
CLDN11-209ENST00000489485 KDM2AQ9Y2K7 1162 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms