RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 AGLP35573 1532 aa23.77■■□□□ 1.4
CLDN11-208ENST00000488989 DHX57Q6P158 1386 aaKnown RBP23.75■■□□□ 1.39
CLDN11-208ENST00000488989 MROH1Q8NDA8 1641 aa23.74■■□□□ 1.39
CLDN11-208ENST00000488989 PRDM15P57071 1507 aaPredicted RBP23.73■■□□□ 1.39
CLDN11-208ENST00000488989 IQGAP3Q86VI3 1631 aa23.73■■□□□ 1.39
CLDN11-208ENST00000488989 SIGLEC1Q9BZZ2 1709 aa23.73■■□□□ 1.39
CLDN11-208ENST00000488989 VWDEQ8N2E2 1590 aa23.71■■□□□ 1.39
CLDN11-208ENST00000488989 PZPP20742 1482 aa23.71■■□□□ 1.39
CLDN11-208ENST00000488989 KIF3BO15066 747 aa23.7■■□□□ 1.38
CLDN11-208ENST00000488989 TRIM52Q96A61 297 aa23.69■■□□□ 1.38
CLDN11-208ENST00000488989 NUP155O75694 1391 aa23.68■■□□□ 1.38
CLDN11-208ENST00000488989 FAM135AQ9P2D6 1515 aa23.67■■□□□ 1.38
CLDN11-208ENST00000488989 MPHOSPH9Q99550 1183 aa23.64■■□□□ 1.37
CLDN11-208ENST00000488989 LMTK2Q8IWU2 1503 aa23.63■■□□□ 1.37
CLDN11-208ENST00000488989 CLSPNQ9HAW4 1339 aa23.61■■□□□ 1.37
CLDN11-208ENST00000488989 TET3O43151 1660 aa23.61■■□□□ 1.37
CLDN11-208ENST00000488989 KANK1Q14678 1352 aa23.61■■□□□ 1.37
CLDN11-208ENST00000488989 ZC3H13Q5T200 1668 aaKnown RBP23.6■■□□□ 1.37
CLDN11-208ENST00000488989 CEP152O94986 1710 aa23.6■■□□□ 1.37
CLDN11-208ENST00000488989 CCER1Q8TC90 406 aaPredicted RBP23.6■■□□□ 1.37
CLDN11-208ENST00000488989 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.59■■□□□ 1.37
CLDN11-208ENST00000488989 SLC4A1APQ9BWU0 796 aaKnown RBP23.59■■□□□ 1.37
CLDN11-208ENST00000488989 PPP6R1Q9UPN7 881 aa23.57■■□□□ 1.36
CLDN11-208ENST00000488989 ABCC3O15438 1527 aa23.57■■□□□ 1.36
CLDN11-208ENST00000488989 GGT6Q6P531 493 aa23.56■■□□□ 1.36
CLDN11-208ENST00000488989 E9PCH4 1651 aa23.54■■□□□ 1.36
CLDN11-208ENST00000488989 EFCAB6Q5THR3 1501 aa23.54■■□□□ 1.36
CLDN11-208ENST00000488989 PKD2Q13563 968 aa23.52■■□□□ 1.36
CLDN11-208ENST00000488989 CAMSAP1Q5T5Y3 1602 aa23.51■■□□□ 1.35
CLDN11-208ENST00000488989 ANKRD30BQ9BXX2 1392 aa23.49■■□□□ 1.35
CLDN11-208ENST00000488989 WASHC2CQ9Y4E1 1318 aa23.48■■□□□ 1.35
CLDN11-208ENST00000488989 ARHGAP31Q2M1Z3 1444 aa23.48■■□□□ 1.35
CLDN11-208ENST00000488989 RPRD2Q5VT52 1461 aaKnown RBP23.48■■□□□ 1.35
CLDN11-208ENST00000488989 CLTCQ00610 1675 aaKnown RBP23.48■■□□□ 1.35
CLDN11-208ENST00000488989 ARID4BQ4LE39 1312 aaPredicted RBP23.47■■□□□ 1.35
CLDN11-208ENST00000488989 FOXD1Q16676 465 aa23.45■■□□□ 1.34
CLDN11-208ENST00000488989 SPHKAPQ2M3C7 1700 aa23.45■■□□□ 1.34
CLDN11-208ENST00000488989 MROH2AA6NES4 1674 aa23.44■■□□□ 1.34
CLDN11-208ENST00000488989 PTPRTO14522 1441 aa23.43■■□□□ 1.34
CLDN11-208ENST00000488989 NPATQ14207 1427 aa23.43■■□□□ 1.34
CLDN11-208ENST00000488989 CNTLNQ9NXG0 1405 aa23.42■■□□□ 1.34
CLDN11-208ENST00000488989 FER1L4A9Z1Z3 1794 aa23.42■■□□□ 1.34
CLDN11-208ENST00000488989 MLECQ14165 292 aa23.42■■□□□ 1.34
CLDN11-208ENST00000488989 PLA2R1Q13018 1463 aa23.42■■□□□ 1.34
CLDN11-208ENST00000488989 CFAP65Q6ZU64 1925 aaKnown RBP23.41■■□□□ 1.34
CLDN11-208ENST00000488989 ADAMTSL3P82987 1691 aa23.4■■□□□ 1.34
CLDN11-208ENST00000488989 TRPM2O94759 1503 aa23.39■■□□□ 1.34
CLDN11-208ENST00000488989 PREX1Q8TCU6 1659 aa23.37■■□□□ 1.33
CLDN11-208ENST00000488989 NOS1P29475 1434 aa23.36■■□□□ 1.33
CLDN11-208ENST00000488989 SIN3AQ96ST3 1273 aa23.35■■□□□ 1.33
CLDN11-208ENST00000488989 MADDQ8WXG6 1647 aa23.33■■□□□ 1.33
CLDN11-208ENST00000488989 ZMYM3Q14202 1370 aa23.33■■□□□ 1.33
CLDN11-208ENST00000488989 ZEB1P37275 1124 aaPredicted RBP23.33■■□□□ 1.33
CLDN11-208ENST00000488989 ESF1Q9H501 851 aaKnown RBP23.33■■□□□ 1.33
CLDN11-208ENST00000488989 SPATA31D1Q6ZQQ2 1576 aa23.31■■□□□ 1.32
CLDN11-208ENST00000488989 C3P01024 1663 aa23.31■■□□□ 1.32
CLDN11-208ENST00000488989 SYNMO15061 1565 aa23.31■■□□□ 1.32
CLDN11-208ENST00000488989 ERVK-7P63135 1459 aa23.3■■□□□ 1.32
CLDN11-208ENST00000488989 CLTCL1P53675 1640 aa23.3■■□□□ 1.32
CLDN11-208ENST00000488989 CCDC144AA2RUR9 1427 aa23.3■■□□□ 1.32
CLDN11-208ENST00000488989 PIK3C2BO00750 1634 aa23.3■■□□□ 1.32
CLDN11-208ENST00000488989 RIMS1Q86UR5 1692 aaKnown RBP23.28■■□□□ 1.32
CLDN11-208ENST00000488989 TIMELESSQ9UNS1 1208 aa23.28■■□□□ 1.32
CLDN11-208ENST00000488989 NEURL4Q96JN8 1562 aa23.27■■□□□ 1.32
CLDN11-208ENST00000488989 NEUROD1Q13562 356 aa23.26■■□□□ 1.31
CLDN11-208ENST00000488989 KIF1BO60333 1816 aa23.26■■□□□ 1.31
CLDN11-208ENST00000488989 UGGT1Q9NYU2 1555 aa23.23■■□□□ 1.31
CLDN11-208ENST00000488989 FBXO31Q5XUX0 539 aaPredicted RBP23.22■■□□□ 1.31
CLDN11-208ENST00000488989 SPATA31E1Q6ZUB1 1445 aa23.2■■□□□ 1.3
CLDN11-208ENST00000488989 SLC52A1Q9NWF4 448 aa23.2■■□□□ 1.3
CLDN11-208ENST00000488989 TONSLQ96HA7 1378 aa23.19■■□□□ 1.3
CLDN11-208ENST00000488989 ADGRB3O60242 1522 aa23.18■■□□□ 1.3
CLDN11-208ENST00000488989 SETD1BQ9UPS6 1966 aaKnown RBP23.16■■□□□ 1.3
CLDN11-208ENST00000488989 TNRQ92752 1358 aa23.15■■□□□ 1.3
CLDN11-208ENST00000488989 KDM5AP29375 1690 aaKnown RBP23.14■■□□□ 1.29
CLDN11-208ENST00000488989 IDI1Q13907 227 aa23.14■■□□□ 1.29
CLDN11-208ENST00000488989 TMEM131LA2VDJ0 1609 aa23.14■■□□□ 1.29
CLDN11-208ENST00000488989 MYO5BQ9ULV0 1848 aa23.13■■□□□ 1.29
CLDN11-208ENST00000488989 CEBPAP49715 358 aaPredicted RBP23.13■■□□□ 1.29
CLDN11-208ENST00000488989 L3MBTL2Q969R5 705 aa23.13■■□□□ 1.29
CLDN11-208ENST00000488989 PTPRMP28827 1452 aa23.12■■□□□ 1.29
CLDN11-208ENST00000488989 NLRP1Q9C000 1473 aa23.11■■□□□ 1.29
CLDN11-208ENST00000488989 IFT172Q9UG01 1749 aa23.11■■□□□ 1.29
CLDN11-208ENST00000488989 PPP1R15AO75807 674 aaPredicted RBP23.09■■□□□ 1.29
CLDN11-208ENST00000488989 MYO3AQ8NEV4 1616 aa23.08■■□□□ 1.28
CLDN11-208ENST00000488989 PPLO60437 1756 aa23.06■■□□□ 1.28
CLDN11-208ENST00000488989 UBR1Q8IWV7 1749 aa23.06■■□□□ 1.28
CLDN11-208ENST00000488989 KDM4FA0A1W2PPD8 638 aa23.05■■□□□ 1.28
CLDN11-208ENST00000488989 RGL3Q3MIN7 710 aa23.04■■□□□ 1.28
CLDN11-208ENST00000488989 STAC3Q96MF2 364 aa23.04■■□□□ 1.28
CLDN11-208ENST00000488989 UHRF1BP1Q6BDS2 1440 aa23.04■■□□□ 1.28
CLDN11-208ENST00000488989 A2ML1A8K2U0 1454 aa23.04■■□□□ 1.28
CLDN11-208ENST00000488989 ZNF142P52746 1687 aaPredicted RBP23.03■■□□□ 1.28
CLDN11-208ENST00000488989 RPGRIP1LQ68CZ1 1315 aa23.03■■□□□ 1.28
CLDN11-208ENST00000488989 NEXMIFQ5QGS0 1516 aa23.02■■□□□ 1.28
CLDN11-208ENST00000488989 MYOM2P54296 1465 aa23.01■■□□□ 1.27
CLDN11-208ENST00000488989 CHGAP10645 457 aaKnown RBP23■■□□□ 1.27
CLDN11-208ENST00000488989 DCAF11Q8TEB1 546 aa23■■□□□ 1.27
CLDN11-208ENST00000488989 CEP170BQ9Y4F5 1589 aaPredicted RBP22.99■■□□□ 1.27
CLDN11-208ENST00000488989 PLPPR3Q6T4P5 718 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms