RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 NUP155O75694 1391 aa19.17■□□□□ 0.66
CHD1L-208ENST00000488864 DHX29Q7Z478 1369 aaKnown RBP19.17■□□□□ 0.66
CHD1L-208ENST00000488864 ABCA6Q8N139 1617 aa19.16■□□□□ 0.66
CHD1L-208ENST00000488864 ERBINQ96RT1 1412 aa19.16■□□□□ 0.66
CHD1L-208ENST00000488864 MPHOSPH9Q99550 1183 aa19.16■□□□□ 0.66
CHD1L-208ENST00000488864 FOXD1Q16676 465 aa19.15■□□□□ 0.66
CHD1L-208ENST00000488864 SLC4A1APQ9BWU0 796 aaKnown RBP19.15■□□□□ 0.66
CHD1L-208ENST00000488864 A2MP01023 1474 aa19.15■□□□□ 0.66
CHD1L-208ENST00000488864 ZMYM4Q5VZL5 1548 aa19.13■□□□□ 0.65
CHD1L-208ENST00000488864 DIP2CQ9Y2E4 1556 aa19.13■□□□□ 0.65
CHD1L-208ENST00000488864 PZPP20742 1482 aa19.1■□□□□ 0.65
CHD1L-208ENST00000488864 GGT6Q6P531 493 aa19.1■□□□□ 0.65
CHD1L-208ENST00000488864 MAGI2Q86UL8 1455 aa19.09■□□□□ 0.65
CHD1L-208ENST00000488864 PKD2Q13563 968 aa19.08■□□□□ 0.64
CHD1L-208ENST00000488864 SIN3AQ96ST3 1273 aa19.08■□□□□ 0.64
CHD1L-208ENST00000488864 ATP10AO60312 1499 aa19.06■□□□□ 0.64
CHD1L-208ENST00000488864 UNC13BO14795 1591 aa19.05■□□□□ 0.64
CHD1L-208ENST00000488864 FAM135AQ9P2D6 1515 aa19.04■□□□□ 0.64
CHD1L-208ENST00000488864 CLSPNQ9HAW4 1339 aa19.03■□□□□ 0.64
CHD1L-208ENST00000488864 EIF2AK4Q9P2K8 1649 aaKnown RBP19.02■□□□□ 0.63
CHD1L-208ENST00000488864 MLECQ14165 292 aa19.02■□□□□ 0.63
CHD1L-208ENST00000488864 ARHGEF40Q8TER5 1519 aa19.02■□□□□ 0.63
CHD1L-208ENST00000488864 KDM5DQ9BY66 1539 aa19.02■□□□□ 0.63
CHD1L-208ENST00000488864 KANK1Q14678 1352 aa19■□□□□ 0.63
CHD1L-208ENST00000488864 DEPDC5O75140 1603 aa18.99■□□□□ 0.63
CHD1L-208ENST00000488864 MROH1Q8NDA8 1641 aa18.99■□□□□ 0.63
CHD1L-208ENST00000488864 ARID4BQ4LE39 1312 aaPredicted RBP18.99■□□□□ 0.63
CHD1L-208ENST00000488864 SIGLEC1Q9BZZ2 1709 aa18.99■□□□□ 0.63
CHD1L-208ENST00000488864 IQGAP3Q86VI3 1631 aa18.98■□□□□ 0.63
CHD1L-208ENST00000488864 WASHC2CQ9Y4E1 1318 aa18.97■□□□□ 0.63
CHD1L-208ENST00000488864 PRDM15P57071 1507 aaPredicted RBP18.97■□□□□ 0.63
CHD1L-208ENST00000488864 ANKRD30BQ9BXX2 1392 aa18.96■□□□□ 0.63
CHD1L-208ENST00000488864 RNF17Q9BXT8 1623 aaKnown RBP18.95■□□□□ 0.62
CHD1L-208ENST00000488864 SUPT16HQ9Y5B9 1047 aaKnown RBP18.94■□□□□ 0.62
CHD1L-208ENST00000488864 VWDEQ8N2E2 1590 aa18.93■□□□□ 0.62
CHD1L-208ENST00000488864 REREQ9P2R6 1566 aa18.93■□□□□ 0.62
CHD1L-208ENST00000488864 BCORL1Q5H9F3 1711 aa18.92■□□□□ 0.62
CHD1L-208ENST00000488864 CEP152O94986 1710 aa18.91■□□□□ 0.62
CHD1L-208ENST00000488864 AGLP35573 1532 aa18.91■□□□□ 0.62
CHD1L-208ENST00000488864 ABCC3O15438 1527 aa18.88■□□□□ 0.61
CHD1L-208ENST00000488864 E9PCH4 1651 aa18.88■□□□□ 0.61
CHD1L-208ENST00000488864 TET3O43151 1660 aa18.87■□□□□ 0.61
CHD1L-208ENST00000488864 PLA2R1Q13018 1463 aa18.87■□□□□ 0.61
CHD1L-208ENST00000488864 CFAP65Q6ZU64 1925 aaKnown RBP18.86■□□□□ 0.61
CHD1L-208ENST00000488864 NPATQ14207 1427 aa18.85■□□□□ 0.61
CHD1L-208ENST00000488864 EFCAB6Q5THR3 1501 aa18.85■□□□□ 0.61
CHD1L-208ENST00000488864 TONSLQ96HA7 1378 aa18.85■□□□□ 0.61
CHD1L-208ENST00000488864 LMTK2Q8IWU2 1503 aa18.84■□□□□ 0.61
CHD1L-208ENST00000488864 ESF1Q9H501 851 aaKnown RBP18.84■□□□□ 0.61
CHD1L-208ENST00000488864 RPRD2Q5VT52 1461 aaKnown RBP18.82■□□□□ 0.6
CHD1L-208ENST00000488864 CCDC144AA2RUR9 1427 aa18.82■□□□□ 0.6
CHD1L-208ENST00000488864 CAMSAP1Q5T5Y3 1602 aa18.81■□□□□ 0.6
CHD1L-208ENST00000488864 FBXO31Q5XUX0 539 aaPredicted RBP18.8■□□□□ 0.6
CHD1L-208ENST00000488864 L3MBTL2Q969R5 705 aa18.8■□□□□ 0.6
CHD1L-208ENST00000488864 PPP6R1Q9UPN7 881 aa18.8■□□□□ 0.6
CHD1L-208ENST00000488864 RGL3Q3MIN7 710 aa18.79■□□□□ 0.6
CHD1L-208ENST00000488864 CLTCQ00610 1675 aaKnown RBP18.79■□□□□ 0.6
CHD1L-208ENST00000488864 PLPPR3Q6T4P5 718 aa18.79■□□□□ 0.6
CHD1L-208ENST00000488864 TSHZ2Q9NRE2 1034 aa18.78■□□□□ 0.6
CHD1L-208ENST00000488864 PTPRTO14522 1441 aa18.77■□□□□ 0.6
CHD1L-208ENST00000488864 UGGT1Q9NYU2 1555 aa18.77■□□□□ 0.6
CHD1L-208ENST00000488864 ZC3H13Q5T200 1668 aaKnown RBP18.77■□□□□ 0.6
CHD1L-208ENST00000488864 SPHKAPQ2M3C7 1700 aa18.77■□□□□ 0.59
CHD1L-208ENST00000488864 ZMYM3Q14202 1370 aa18.75■□□□□ 0.59
CHD1L-208ENST00000488864 TIMELESSQ9UNS1 1208 aa18.75■□□□□ 0.59
CHD1L-208ENST00000488864 TRPM2O94759 1503 aa18.75■□□□□ 0.59
CHD1L-208ENST00000488864 ARHGAP31Q2M1Z3 1444 aa18.74■□□□□ 0.59
CHD1L-208ENST00000488864 CEBPAP49715 358 aaPredicted RBP18.74■□□□□ 0.59
CHD1L-208ENST00000488864 PPP1R15AO75807 674 aaPredicted RBP18.73■□□□□ 0.59
CHD1L-208ENST00000488864 CHGAP10645 457 aaKnown RBP18.73■□□□□ 0.59
CHD1L-208ENST00000488864 KDM2AQ9Y2K7 1162 aa18.72■□□□□ 0.59
CHD1L-208ENST00000488864 CLTCL1P53675 1640 aa18.72■□□□□ 0.59
CHD1L-208ENST00000488864 NOS1P29475 1434 aa18.71■□□□□ 0.59
CHD1L-208ENST00000488864 ZNF326Q5BKZ1 582 aaKnown RBP18.7■□□□□ 0.58
CHD1L-208ENST00000488864 DCAF11Q8TEB1 546 aa18.7■□□□□ 0.58
CHD1L-208ENST00000488864 CNTLNQ9NXG0 1405 aa18.7■□□□□ 0.58
CHD1L-208ENST00000488864 IDI1Q13907 227 aa18.69■□□□□ 0.58
CHD1L-208ENST00000488864 SYNMO15061 1565 aa18.68■□□□□ 0.58
CHD1L-208ENST00000488864 ERVK-7P63135 1459 aa18.68■□□□□ 0.58
CHD1L-208ENST00000488864 PREX1Q8TCU6 1659 aa18.67■□□□□ 0.58
CHD1L-208ENST00000488864 FER1L4A9Z1Z3 1794 aa18.66■□□□□ 0.58
CHD1L-208ENST00000488864 SPATA31E1Q6ZUB1 1445 aa18.66■□□□□ 0.58
CHD1L-208ENST00000488864 NBPF8Q3BBV2 869 aa18.65■□□□□ 0.58
CHD1L-208ENST00000488864 MADDQ8WXG6 1647 aa18.64■□□□□ 0.57
CHD1L-208ENST00000488864 SLC52A1Q9NWF4 448 aa18.63■□□□□ 0.57
CHD1L-208ENST00000488864 ANP32EQ9BTT0 268 aa18.62■□□□□ 0.57
CHD1L-208ENST00000488864 SPATA31D1Q6ZQQ2 1576 aa18.61■□□□□ 0.57
CHD1L-208ENST00000488864 STAG3Q9UJ98 1225 aa18.6■□□□□ 0.57
CHD1L-208ENST00000488864 RIMS1Q86UR5 1692 aaKnown RBP18.6■□□□□ 0.57
CHD1L-208ENST00000488864 KIF1BO60333 1816 aa18.6■□□□□ 0.57
CHD1L-208ENST00000488864 NUTM2DQ5VT03 806 aaPredicted RBP18.6■□□□□ 0.57
CHD1L-208ENST00000488864 TNRQ92752 1358 aa18.59■□□□□ 0.57
CHD1L-208ENST00000488864 MROH2AA6NES4 1674 aa18.59■□□□□ 0.57
CHD1L-208ENST00000488864 PIK3C2BO00750 1634 aa18.59■□□□□ 0.57
CHD1L-208ENST00000488864 C3P01024 1663 aa18.59■□□□□ 0.57
CHD1L-208ENST00000488864 ADAMTSL3P82987 1691 aa18.58■□□□□ 0.57
CHD1L-208ENST00000488864 BCANQ96GW7 911 aa18.58■□□□□ 0.57
CHD1L-208ENST00000488864 SENP3Q9H4L4 574 aaPredicted RBP18.58■□□□□ 0.57
CHD1L-208ENST00000488864 ADGRB3O60242 1522 aa18.57■□□□□ 0.56
CHD1L-208ENST00000488864 HIRIP3Q9BW71 556 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms