RNA–Protein interactions for RNA: ENST00000488639.6

CEACAM1-212, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 3

Gene CEACAM1, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-212ENST00000488639 EIF2AK4Q9P2K8 1649 aaKnown RBP17.76■□□□□ 0.43
CEACAM1-212ENST00000488639 DHX29Q7Z478 1369 aaKnown RBP17.76■□□□□ 0.43
CEACAM1-212ENST00000488639 PTPRKQ15262 1439 aa17.74■□□□□ 0.43
CEACAM1-212ENST00000488639 KIF15Q9NS87 1388 aa17.74■□□□□ 0.43
CEACAM1-212ENST00000488639 ERBINQ96RT1 1412 aa17.73■□□□□ 0.43
CEACAM1-212ENST00000488639 SIGLEC1Q9BZZ2 1709 aa17.71■□□□□ 0.43
CEACAM1-212ENST00000488639 CHIC2Q9UKJ5 165 aa17.7■□□□□ 0.42
CEACAM1-212ENST00000488639 GCC2Q8IWJ2 1684 aa17.7■□□□□ 0.42
CEACAM1-212ENST00000488639 FAM135AQ9P2D6 1515 aa17.69■□□□□ 0.42
CEACAM1-212ENST00000488639 ITGAEP38570 1179 aa17.68■□□□□ 0.42
CEACAM1-212ENST00000488639 RRP7BPQ9NSQ0 103 aa17.68■□□□□ 0.42
CEACAM1-212ENST00000488639 RNF17Q9BXT8 1623 aaKnown RBP17.68■□□□□ 0.42
CEACAM1-212ENST00000488639 ARID4BQ4LE39 1312 aaPredicted RBP17.67■□□□□ 0.42
CEACAM1-212ENST00000488639 HFM1A2PYH4 1435 aa17.66■□□□□ 0.42
CEACAM1-212ENST00000488639 ANKRD50Q9ULJ7 1429 aa17.66■□□□□ 0.42
CEACAM1-212ENST00000488639 DEPDC5O75140 1603 aa17.65■□□□□ 0.42
CEACAM1-212ENST00000488639 ADAMTSL3P82987 1691 aa17.64■□□□□ 0.42
CEACAM1-212ENST00000488639 ACIN1Q9UKV3 1341 aaKnown RBP17.64■□□□□ 0.41
CEACAM1-212ENST00000488639 NAIPQ13075 1403 aa17.63■□□□□ 0.41
CEACAM1-212ENST00000488639 FER1L4A9Z1Z3 1794 aa17.62■□□□□ 0.41
CEACAM1-212ENST00000488639 TRIM26Q12899 539 aaPredicted RBP17.62■□□□□ 0.41
CEACAM1-212ENST00000488639 PRDM15P57071 1507 aaPredicted RBP17.62■□□□□ 0.41
CEACAM1-212ENST00000488639 ZC3H13Q5T200 1668 aaKnown RBP17.61■□□□□ 0.41
CEACAM1-212ENST00000488639 KIF3BO15066 747 aa17.61■□□□□ 0.41
CEACAM1-212ENST00000488639 CNTLNQ9NXG0 1405 aa17.6■□□□□ 0.41
CEACAM1-212ENST00000488639 MROH2AA6NES4 1674 aa17.59■□□□□ 0.41
CEACAM1-212ENST00000488639 UNC13BO14795 1591 aa17.59■□□□□ 0.41
CEACAM1-212ENST00000488639 MROH1Q8NDA8 1641 aa17.58■□□□□ 0.41
CEACAM1-212ENST00000488639 KDM5DQ9BY66 1539 aa17.58■□□□□ 0.41
CEACAM1-212ENST00000488639 MADDQ8WXG6 1647 aa17.57■□□□□ 0.4
CEACAM1-212ENST00000488639 KANK1Q14678 1352 aa17.56■□□□□ 0.4
CEACAM1-212ENST00000488639 VWDEQ8N2E2 1590 aa17.55■□□□□ 0.4
CEACAM1-212ENST00000488639 GGT6Q6P531 493 aa17.55■□□□□ 0.4
CEACAM1-212ENST00000488639 ESF1Q9H501 851 aaKnown RBP17.55■□□□□ 0.4
CEACAM1-212ENST00000488639 SETD5Q9C0A6 1442 aa17.55■□□□□ 0.4
CEACAM1-212ENST00000488639 LMTK2Q8IWU2 1503 aa17.53■□□□□ 0.4
CEACAM1-212ENST00000488639 CLTCQ00610 1675 aaKnown RBP17.53■□□□□ 0.4
CEACAM1-212ENST00000488639 RIMS1Q86UR5 1692 aaKnown RBP17.53■□□□□ 0.4
CEACAM1-212ENST00000488639 MLECQ14165 292 aa17.53■□□□□ 0.4
CEACAM1-212ENST00000488639 IQGAP3Q86VI3 1631 aa17.53■□□□□ 0.4
CEACAM1-212ENST00000488639 HRCP23327 699 aa17.52■□□□□ 0.4
CEACAM1-212ENST00000488639 ABCC3O15438 1527 aa17.52■□□□□ 0.39
CEACAM1-212ENST00000488639 WASHC2CQ9Y4E1 1318 aa17.5■□□□□ 0.39
CEACAM1-212ENST00000488639 CEP152O94986 1710 aa17.5■□□□□ 0.39
CEACAM1-212ENST00000488639 KDM4FA0A1W2PPD8 638 aa17.49■□□□□ 0.39
CEACAM1-212ENST00000488639 CAMSAP1Q5T5Y3 1602 aa17.49■□□□□ 0.39
CEACAM1-212ENST00000488639 TET3O43151 1660 aa17.48■□□□□ 0.39
CEACAM1-212ENST00000488639 PTPRMP28827 1452 aa17.48■□□□□ 0.39
CEACAM1-212ENST00000488639 C3P01024 1663 aa17.48■□□□□ 0.39
CEACAM1-212ENST00000488639 ARHGAP31Q2M1Z3 1444 aa17.47■□□□□ 0.39
CEACAM1-212ENST00000488639 NUP155O75694 1391 aa17.46■□□□□ 0.39
CEACAM1-212ENST00000488639 RAB3GAP2Q9H2M9 1393 aa17.46■□□□□ 0.39
CEACAM1-212ENST00000488639 EFCAB6Q5THR3 1501 aa17.46■□□□□ 0.39
CEACAM1-212ENST00000488639 PZPP20742 1482 aa17.45■□□□□ 0.38
CEACAM1-212ENST00000488639 RPRD2Q5VT52 1461 aaKnown RBP17.45■□□□□ 0.38
CEACAM1-212ENST00000488639 ZMYM3Q14202 1370 aa17.45■□□□□ 0.38
CEACAM1-212ENST00000488639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.45■□□□□ 0.38
CEACAM1-212ENST00000488639 NPATQ14207 1427 aa17.43■□□□□ 0.38
CEACAM1-212ENST00000488639 SETD1BQ9UPS6 1966 aaKnown RBP17.42■□□□□ 0.38
CEACAM1-212ENST00000488639 E9PCH4 1651 aa17.39■□□□□ 0.37
CEACAM1-212ENST00000488639 TRIM52Q96A61 297 aa17.39■□□□□ 0.37
CEACAM1-212ENST00000488639 PREX1Q8TCU6 1659 aa17.39■□□□□ 0.37
CEACAM1-212ENST00000488639 SPATA31D1Q6ZQQ2 1576 aa17.38■□□□□ 0.37
CEACAM1-212ENST00000488639 ERVK-7P63135 1459 aa17.36■□□□□ 0.37
CEACAM1-212ENST00000488639 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
CEACAM1-212ENST00000488639 SPHKAPQ2M3C7 1700 aa17.33■□□□□ 0.37
CEACAM1-212ENST00000488639 NOS1P29475 1434 aa17.33■□□□□ 0.36
CEACAM1-212ENST00000488639 CACNB1Q02641 598 aaPredicted RBP17.33■□□□□ 0.36
CEACAM1-212ENST00000488639 CFAP65Q6ZU64 1925 aaKnown RBP17.33■□□□□ 0.36
CEACAM1-212ENST00000488639 NLRP1Q9C000 1473 aa17.32■□□□□ 0.36
CEACAM1-212ENST00000488639 MYO3AQ8NEV4 1616 aa17.32■□□□□ 0.36
CEACAM1-212ENST00000488639 TNRQ92752 1358 aa17.31■□□□□ 0.36
CEACAM1-212ENST00000488639 CEBPAP49715 358 aaPredicted RBP17.31■□□□□ 0.36
CEACAM1-212ENST00000488639 MPHOSPH9Q99550 1183 aa17.31■□□□□ 0.36
CEACAM1-212ENST00000488639 PCGF6Q9BYE7 350 aa17.31■□□□□ 0.36
CEACAM1-212ENST00000488639 ZNF142P52746 1687 aaPredicted RBP17.31■□□□□ 0.36
CEACAM1-212ENST00000488639 PTPRTO14522 1441 aa17.3■□□□□ 0.36
CEACAM1-212ENST00000488639 KDM5AP29375 1690 aaKnown RBP17.3■□□□□ 0.36
CEACAM1-212ENST00000488639 RNF39Q9H2S5 420 aa17.3■□□□□ 0.36
CEACAM1-212ENST00000488639 PKD2Q13563 968 aa17.29■□□□□ 0.36
CEACAM1-212ENST00000488639 UHRF1BP1Q6BDS2 1440 aa17.29■□□□□ 0.36
CEACAM1-212ENST00000488639 SYNMO15061 1565 aa17.28■□□□□ 0.36
CEACAM1-212ENST00000488639 TRPM2O94759 1503 aa17.28■□□□□ 0.36
CEACAM1-212ENST00000488639 SLC52A1Q9NWF4 448 aa17.28■□□□□ 0.36
CEACAM1-212ENST00000488639 PIK3C2BO00750 1634 aa17.28■□□□□ 0.36
CEACAM1-212ENST00000488639 FBXO31Q5XUX0 539 aaPredicted RBP17.27■□□□□ 0.36
CEACAM1-212ENST00000488639 A2ML1A8K2U0 1454 aa17.25■□□□□ 0.35
CEACAM1-212ENST00000488639 CEP170BQ9Y4F5 1589 aaPredicted RBP17.25■□□□□ 0.35
CEACAM1-212ENST00000488639 UGGT1Q9NYU2 1555 aa17.21■□□□□ 0.35
CEACAM1-212ENST00000488639 LMTK3Q96Q04 1460 aa17.21■□□□□ 0.35
CEACAM1-212ENST00000488639 KIF1BO60333 1816 aa17.21■□□□□ 0.35
CEACAM1-212ENST00000488639 UBR1Q8IWV7 1749 aa17.21■□□□□ 0.35
CEACAM1-212ENST00000488639 PLA2R1Q13018 1463 aa17.2■□□□□ 0.34
CEACAM1-212ENST00000488639 ADGRB3O60242 1522 aa17.2■□□□□ 0.34
CEACAM1-212ENST00000488639 NEURL4Q96JN8 1562 aa17.19■□□□□ 0.34
CEACAM1-212ENST00000488639 CCDC144AA2RUR9 1427 aa17.19■□□□□ 0.34
CEACAM1-212ENST00000488639 CLTCL1P53675 1640 aa17.18■□□□□ 0.34
CEACAM1-212ENST00000488639 ANKRD30BQ9BXX2 1392 aa17.18■□□□□ 0.34
CEACAM1-212ENST00000488639 TMEM131LA2VDJ0 1609 aa17.18■□□□□ 0.34
CEACAM1-212ENST00000488639 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms