RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 PTPRKQ15262 1439 aa24.6■■□□□ 1.53
ERGIC3-216ENST00000488384 ANKRD30AQ9BXX3 1397 aa24.59■■□□□ 1.53
ERGIC3-216ENST00000488384 CEBPAP49715 358 aaPredicted RBP24.59■■□□□ 1.53
ERGIC3-216ENST00000488384 GGT6Q6P531 493 aa24.59■■□□□ 1.53
ERGIC3-216ENST00000488384 CHIC2Q9UKJ5 165 aa24.59■■□□□ 1.53
ERGIC3-216ENST00000488384 NCOA1Q15788 1441 aa24.59■■□□□ 1.53
ERGIC3-216ENST00000488384 ERBINQ96RT1 1412 aa24.58■■□□□ 1.53
ERGIC3-216ENST00000488384 STRCQ7RTU9 1775 aa24.57■■□□□ 1.52
ERGIC3-216ENST00000488384 FAM135AQ9P2D6 1515 aa24.57■■□□□ 1.52
ERGIC3-216ENST00000488384 MROH1Q8NDA8 1641 aa24.57■■□□□ 1.52
ERGIC3-216ENST00000488384 ESF1Q9H501 851 aaKnown RBP24.56■■□□□ 1.52
ERGIC3-216ENST00000488384 RRP7BPQ9NSQ0 103 aa24.56■■□□□ 1.52
ERGIC3-216ENST00000488384 KDM5DQ9BY66 1539 aa24.55■■□□□ 1.52
ERGIC3-216ENST00000488384 SETD1BQ9UPS6 1966 aaKnown RBP24.54■■□□□ 1.52
ERGIC3-216ENST00000488384 PPP6R1Q9UPN7 881 aa24.53■■□□□ 1.52
ERGIC3-216ENST00000488384 DEPDC5O75140 1603 aa24.51■■□□□ 1.51
ERGIC3-216ENST00000488384 PRDM15P57071 1507 aaPredicted RBP24.51■■□□□ 1.51
ERGIC3-216ENST00000488384 ZMYM3Q14202 1370 aa24.5■■□□□ 1.51
ERGIC3-216ENST00000488384 ROCK1Q13464 1354 aa24.49■■□□□ 1.51
ERGIC3-216ENST00000488384 ZC3H13Q5T200 1668 aaKnown RBP24.49■■□□□ 1.51
ERGIC3-216ENST00000488384 ABCC3O15438 1527 aa24.48■■□□□ 1.51
ERGIC3-216ENST00000488384 UHRF1BP1Q6BDS2 1440 aa24.46■■□□□ 1.51
ERGIC3-216ENST00000488384 ITGAEP38570 1179 aa24.45■■□□□ 1.5
ERGIC3-216ENST00000488384 NPATQ14207 1427 aa24.44■■□□□ 1.5
ERGIC3-216ENST00000488384 ANKRD50Q9ULJ7 1429 aa24.44■■□□□ 1.5
ERGIC3-216ENST00000488384 CEP152O94986 1710 aa24.44■■□□□ 1.5
ERGIC3-216ENST00000488384 WASHC2CQ9Y4E1 1318 aa24.42■■□□□ 1.5
ERGIC3-216ENST00000488384 PZPP20742 1482 aa24.42■■□□□ 1.5
ERGIC3-216ENST00000488384 ZNF142P52746 1687 aaPredicted RBP24.41■■□□□ 1.5
ERGIC3-216ENST00000488384 MYO3AQ8NEV4 1616 aa24.41■■□□□ 1.5
ERGIC3-216ENST00000488384 CAMSAP1Q5T5Y3 1602 aa24.4■■□□□ 1.5
ERGIC3-216ENST00000488384 VWDEQ8N2E2 1590 aa24.4■■□□□ 1.5
ERGIC3-216ENST00000488384 UNC13BO14795 1591 aa24.36■■□□□ 1.49
ERGIC3-216ENST00000488384 FBXO41Q8TF61 875 aa24.35■■□□□ 1.49
ERGIC3-216ENST00000488384 LMTK2Q8IWU2 1503 aa24.35■■□□□ 1.49
ERGIC3-216ENST00000488384 KANK1Q14678 1352 aa24.33■■□□□ 1.49
ERGIC3-216ENST00000488384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.33■■□□□ 1.49
ERGIC3-216ENST00000488384 GCC2Q8IWJ2 1684 aa24.33■■□□□ 1.49
ERGIC3-216ENST00000488384 FBXO31Q5XUX0 539 aaPredicted RBP24.31■■□□□ 1.48
ERGIC3-216ENST00000488384 SPATA31D1Q6ZQQ2 1576 aa24.31■■□□□ 1.48
ERGIC3-216ENST00000488384 ARHGAP31Q2M1Z3 1444 aa24.3■■□□□ 1.48
ERGIC3-216ENST00000488384 TNRQ92752 1358 aa24.29■■□□□ 1.48
ERGIC3-216ENST00000488384 CEP170BQ9Y4F5 1589 aaPredicted RBP24.29■■□□□ 1.48
ERGIC3-216ENST00000488384 NAIPQ13075 1403 aa24.29■■□□□ 1.48
ERGIC3-216ENST00000488384 ERVK-7P63135 1459 aa24.29■■□□□ 1.48
ERGIC3-216ENST00000488384 EFCAB6Q5THR3 1501 aa24.29■■□□□ 1.48
ERGIC3-216ENST00000488384 HFM1A2PYH4 1435 aa24.27■■□□□ 1.48
ERGIC3-216ENST00000488384 PTPRTO14522 1441 aa24.27■■□□□ 1.48
ERGIC3-216ENST00000488384 IQGAP3Q86VI3 1631 aa24.25■■□□□ 1.47
ERGIC3-216ENST00000488384 TET3O43151 1660 aa24.24■■□□□ 1.47
ERGIC3-216ENST00000488384 A2ML1A8K2U0 1454 aa24.24■■□□□ 1.47
ERGIC3-216ENST00000488384 LTBP4Q8N2S1 1624 aa24.23■■□□□ 1.47
ERGIC3-216ENST00000488384 NLRP1Q9C000 1473 aa24.21■■□□□ 1.47
ERGIC3-216ENST00000488384 CFAP65Q6ZU64 1925 aaKnown RBP24.2■■□□□ 1.46
ERGIC3-216ENST00000488384 CERKQ8TCT0 537 aa24.2■■□□□ 1.46
ERGIC3-216ENST00000488384 PLA2R1Q13018 1463 aa24.19■■□□□ 1.46
ERGIC3-216ENST00000488384 RPRD2Q5VT52 1461 aaKnown RBP24.17■■□□□ 1.46
ERGIC3-216ENST00000488384 NUP155O75694 1391 aa24.16■■□□□ 1.46
ERGIC3-216ENST00000488384 SYNMO15061 1565 aa24.16■■□□□ 1.46
ERGIC3-216ENST00000488384 E9PCH4 1651 aa24.15■■□□□ 1.46
ERGIC3-216ENST00000488384 NOS1P29475 1434 aa24.15■■□□□ 1.46
ERGIC3-216ENST00000488384 POLR1AO95602 1720 aaPredicted RBP24.14■■□□□ 1.45
ERGIC3-216ENST00000488384 DMRT2Q9Y5R5 561 aa24.14■■□□□ 1.45
ERGIC3-216ENST00000488384 NEURL4Q96JN8 1562 aa24.12■■□□□ 1.45
ERGIC3-216ENST00000488384 UGGT1Q9NYU2 1555 aa24.12■■□□□ 1.45
ERGIC3-216ENST00000488384 UBR1Q8IWV7 1749 aa24.1■■□□□ 1.45
ERGIC3-216ENST00000488384 PIK3C2BO00750 1634 aa24.09■■□□□ 1.45
ERGIC3-216ENST00000488384 NCKAP5LQ9HCH0 1330 aa24.09■■□□□ 1.45
ERGIC3-216ENST00000488384 KDM5AP29375 1690 aaKnown RBP24.03■■□□□ 1.44
ERGIC3-216ENST00000488384 IQSEC2Q5JU85 1478 aa24.02■■□□□ 1.44
ERGIC3-216ENST00000488384 ADGRB3O60242 1522 aa24.02■■□□□ 1.44
ERGIC3-216ENST00000488384 THEMISQ8N1K5 641 aaPredicted RBP24.01■■□□□ 1.43
ERGIC3-216ENST00000488384 SETD5Q9C0A6 1442 aa24.01■■□□□ 1.43
ERGIC3-216ENST00000488384 SPHKAPQ2M3C7 1700 aa24■■□□□ 1.43
ERGIC3-216ENST00000488384 PKD2Q13563 968 aa23.99■■□□□ 1.43
ERGIC3-216ENST00000488384 IDI1Q13907 227 aa23.99■■□□□ 1.43
ERGIC3-216ENST00000488384 TRIM52Q96A61 297 aa23.98■■□□□ 1.43
ERGIC3-216ENST00000488384 ZNF335Q9H4Z2 1342 aaPredicted RBP23.98■■□□□ 1.43
ERGIC3-216ENST00000488384 ARHGAP23Q9P227 1491 aa23.98■■□□□ 1.43
ERGIC3-216ENST00000488384 SLIT1O75093 1534 aa23.98■■□□□ 1.43
ERGIC3-216ENST00000488384 SLC52A1Q9NWF4 448 aa23.97■■□□□ 1.43
ERGIC3-216ENST00000488384 RAB3GAP2Q9H2M9 1393 aa23.94■■□□□ 1.42
ERGIC3-216ENST00000488384 TMEM131LA2VDJ0 1609 aa23.94■■□□□ 1.42
ERGIC3-216ENST00000488384 TRPM2O94759 1503 aa23.94■■□□□ 1.42
ERGIC3-216ENST00000488384 MYO5BQ9ULV0 1848 aa23.93■■□□□ 1.42
ERGIC3-216ENST00000488384 MED14O60244 1454 aa23.93■■□□□ 1.42
ERGIC3-216ENST00000488384 TMEM2Q9UHN6 1383 aa23.91■■□□□ 1.42
ERGIC3-216ENST00000488384 ANKLE2Q86XL3 938 aa23.91■■□□□ 1.42
ERGIC3-216ENST00000488384 SLC4A1APQ9BWU0 796 aaKnown RBP23.91■■□□□ 1.42
ERGIC3-216ENST00000488384 SCAF11Q99590 1463 aaKnown RBP23.91■■□□□ 1.42
ERGIC3-216ENST00000488384 IQGAP1P46940 1657 aa23.91■■□□□ 1.42
ERGIC3-216ENST00000488384 STAG3Q9UJ98 1225 aa23.9■■□□□ 1.42
ERGIC3-216ENST00000488384 STRCP1A6NGW2 1772 aa23.9■■□□□ 1.42
ERGIC3-216ENST00000488384 CLTCL1P53675 1640 aa23.89■■□□□ 1.42
ERGIC3-216ENST00000488384 NPHP4O75161 1426 aaPredicted RBP23.89■■□□□ 1.41
ERGIC3-216ENST00000488384 ACIN1Q9UKV3 1341 aaKnown RBP23.85■■□□□ 1.41
ERGIC3-216ENST00000488384 LTKP29376 864 aa23.85■■□□□ 1.41
ERGIC3-216ENST00000488384 ZFYVE9O95405 1425 aa23.84■■□□□ 1.41
ERGIC3-216ENST00000488384 MPHOSPH9Q99550 1183 aa23.83■■□□□ 1.41
ERGIC3-216ENST00000488384 TXNDC2Q86VQ3 553 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 708.1 ms