RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 ACIN1Q9UKV3 1341 aaKnown RBP20.92■□□□□ 0.94
NUP188-207ENST00000487952 KANK1Q14678 1352 aa20.92■□□□□ 0.94
NUP188-207ENST00000487952 SIGLEC1Q9BZZ2 1709 aa20.92■□□□□ 0.94
NUP188-207ENST00000487952 BCORL1Q5H9F3 1711 aa20.91■□□□□ 0.94
NUP188-207ENST00000487952 TRIM52Q96A61 297 aa20.91■□□□□ 0.94
NUP188-207ENST00000487952 RNF17Q9BXT8 1623 aaKnown RBP20.89■□□□□ 0.93
NUP188-207ENST00000487952 PPP6R1Q9UPN7 881 aa20.88■□□□□ 0.93
NUP188-207ENST00000487952 HRCP23327 699 aa20.87■□□□□ 0.93
NUP188-207ENST00000487952 NUP155O75694 1391 aa20.86■□□□□ 0.93
NUP188-207ENST00000487952 UNC13BO14795 1591 aa20.85■□□□□ 0.93
NUP188-207ENST00000487952 WASHC2CQ9Y4E1 1318 aa20.85■□□□□ 0.93
NUP188-207ENST00000487952 PRDM15P57071 1507 aaPredicted RBP20.85■□□□□ 0.93
NUP188-207ENST00000487952 DEPDC5O75140 1603 aa20.85■□□□□ 0.93
NUP188-207ENST00000487952 MROH1Q8NDA8 1641 aa20.83■□□□□ 0.93
NUP188-207ENST00000487952 FAM135AQ9P2D6 1515 aa20.83■□□□□ 0.92
NUP188-207ENST00000487952 KDM5DQ9BY66 1539 aa20.82■□□□□ 0.92
NUP188-207ENST00000487952 CNTLNQ9NXG0 1405 aa20.81■□□□□ 0.92
NUP188-207ENST00000487952 ABCC3O15438 1527 aa20.78■□□□□ 0.92
NUP188-207ENST00000487952 ZC3H13Q5T200 1668 aaKnown RBP20.77■□□□□ 0.92
NUP188-207ENST00000487952 VWDEQ8N2E2 1590 aa20.77■□□□□ 0.92
NUP188-207ENST00000487952 SLC4A1APQ9BWU0 796 aaKnown RBP20.77■□□□□ 0.92
NUP188-207ENST00000487952 IQGAP3Q86VI3 1631 aa20.77■□□□□ 0.92
NUP188-207ENST00000487952 ADAMTSL3P82987 1691 aa20.77■□□□□ 0.91
NUP188-207ENST00000487952 MADDQ8WXG6 1647 aa20.76■□□□□ 0.91
NUP188-207ENST00000487952 FER1L4A9Z1Z3 1794 aa20.76■□□□□ 0.91
NUP188-207ENST00000487952 LMTK2Q8IWU2 1503 aa20.75■□□□□ 0.91
NUP188-207ENST00000487952 CLTCQ00610 1675 aaKnown RBP20.74■□□□□ 0.91
NUP188-207ENST00000487952 CEP152O94986 1710 aa20.74■□□□□ 0.91
NUP188-207ENST00000487952 MPHOSPH9Q99550 1183 aa20.73■□□□□ 0.91
NUP188-207ENST00000487952 PZPP20742 1482 aa20.73■□□□□ 0.91
NUP188-207ENST00000487952 RIMS1Q86UR5 1692 aaKnown RBP20.72■□□□□ 0.91
NUP188-207ENST00000487952 ZMYM3Q14202 1370 aa20.72■□□□□ 0.91
NUP188-207ENST00000487952 TET3O43151 1660 aa20.71■□□□□ 0.91
NUP188-207ENST00000487952 PKD2Q13563 968 aa20.71■□□□□ 0.91
NUP188-207ENST00000487952 PLPPR3Q6T4P5 718 aa20.71■□□□□ 0.91
NUP188-207ENST00000487952 EFCAB6Q5THR3 1501 aa20.7■□□□□ 0.9
NUP188-207ENST00000487952 KDM4FA0A1W2PPD8 638 aa20.7■□□□□ 0.9
NUP188-207ENST00000487952 CAMSAP1Q5T5Y3 1602 aa20.7■□□□□ 0.9
NUP188-207ENST00000487952 MROH2AA6NES4 1674 aa20.69■□□□□ 0.9
NUP188-207ENST00000487952 ARHGAP31Q2M1Z3 1444 aa20.69■□□□□ 0.9
NUP188-207ENST00000487952 NPATQ14207 1427 aa20.66■□□□□ 0.9
NUP188-207ENST00000487952 RPRD2Q5VT52 1461 aaKnown RBP20.66■□□□□ 0.9
NUP188-207ENST00000487952 PTPRMP28827 1452 aa20.65■□□□□ 0.9
NUP188-207ENST00000487952 CEBPAP49715 358 aaPredicted RBP20.65■□□□□ 0.9
NUP188-207ENST00000487952 C3P01024 1663 aa20.62■□□□□ 0.89
NUP188-207ENST00000487952 FOXD1Q16676 465 aa20.62■□□□□ 0.89
NUP188-207ENST00000487952 DHX57Q6P158 1386 aaKnown RBP20.61■□□□□ 0.89
NUP188-207ENST00000487952 E9PCH4 1651 aa20.61■□□□□ 0.89
NUP188-207ENST00000487952 FBXO31Q5XUX0 539 aaPredicted RBP20.61■□□□□ 0.89
NUP188-207ENST00000487952 ERVK-7P63135 1459 aa20.61■□□□□ 0.89
NUP188-207ENST00000487952 TNRQ92752 1358 aa20.58■□□□□ 0.88
NUP188-207ENST00000487952 PREX1Q8TCU6 1659 aa20.57■□□□□ 0.88
NUP188-207ENST00000487952 SPATA31D1Q6ZQQ2 1576 aa20.56■□□□□ 0.88
NUP188-207ENST00000487952 NOS1P29475 1434 aa20.56■□□□□ 0.88
NUP188-207ENST00000487952 CFAP65Q6ZU64 1925 aaKnown RBP20.55■□□□□ 0.88
NUP188-207ENST00000487952 PTPRTO14522 1441 aa20.54■□□□□ 0.88
NUP188-207ENST00000487952 CCER1Q8TC90 406 aaPredicted RBP20.54■□□□□ 0.88
NUP188-207ENST00000487952 SPHKAPQ2M3C7 1700 aa20.53■□□□□ 0.88
NUP188-207ENST00000487952 SLC52A1Q9NWF4 448 aa20.52■□□□□ 0.88
NUP188-207ENST00000487952 TRPM2O94759 1503 aa20.52■□□□□ 0.87
NUP188-207ENST00000487952 ANKRD30BQ9BXX2 1392 aa20.51■□□□□ 0.87
NUP188-207ENST00000487952 CCDC144AA2RUR9 1427 aa20.51■□□□□ 0.87
NUP188-207ENST00000487952 SYNMO15061 1565 aa20.51■□□□□ 0.87
NUP188-207ENST00000487952 PLA2R1Q13018 1463 aa20.5■□□□□ 0.87
NUP188-207ENST00000487952 STAG3Q9UJ98 1225 aa20.49■□□□□ 0.87
NUP188-207ENST00000487952 NLRP1Q9C000 1473 aa20.48■□□□□ 0.87
NUP188-207ENST00000487952 UHRF1BP1Q6BDS2 1440 aa20.47■□□□□ 0.87
NUP188-207ENST00000487952 CHGAP10645 457 aaKnown RBP20.47■□□□□ 0.87
NUP188-207ENST00000487952 IDI1Q13907 227 aa20.47■□□□□ 0.87
NUP188-207ENST00000487952 SETD1BQ9UPS6 1966 aaKnown RBP20.46■□□□□ 0.87
NUP188-207ENST00000487952 UGGT1Q9NYU2 1555 aa20.45■□□□□ 0.86
NUP188-207ENST00000487952 CLSPNQ9HAW4 1339 aa20.45■□□□□ 0.86
NUP188-207ENST00000487952 AEBP2Q6ZN18 517 aaPredicted RBP20.44■□□□□ 0.86
NUP188-207ENST00000487952 CLTCL1P53675 1640 aa20.44■□□□□ 0.86
NUP188-207ENST00000487952 MYO3AQ8NEV4 1616 aa20.44■□□□□ 0.86
NUP188-207ENST00000487952 A2ML1A8K2U0 1454 aa20.43■□□□□ 0.86
NUP188-207ENST00000487952 PIK3C2BO00750 1634 aa20.42■□□□□ 0.86
NUP188-207ENST00000487952 NEUROD1Q13562 356 aa20.41■□□□□ 0.86
NUP188-207ENST00000487952 CEP170BQ9Y4F5 1589 aaPredicted RBP20.4■□□□□ 0.86
NUP188-207ENST00000487952 ADGRB3O60242 1522 aa20.39■□□□□ 0.85
NUP188-207ENST00000487952 SIN3AQ96ST3 1273 aa20.39■□□□□ 0.85
NUP188-207ENST00000487952 ZNF326Q5BKZ1 582 aaKnown RBP20.38■□□□□ 0.85
NUP188-207ENST00000487952 THEMISQ8N1K5 641 aaPredicted RBP20.38■□□□□ 0.85
NUP188-207ENST00000487952 ZNF142P52746 1687 aaPredicted RBP20.36■□□□□ 0.85
NUP188-207ENST00000487952 RGL3Q3MIN7 710 aa20.36■□□□□ 0.85
NUP188-207ENST00000487952 KIF1BO60333 1816 aa20.36■□□□□ 0.85
NUP188-207ENST00000487952 TMEM131LA2VDJ0 1609 aa20.33■□□□□ 0.84
NUP188-207ENST00000487952 SPATA31E1Q6ZUB1 1445 aa20.32■□□□□ 0.84
NUP188-207ENST00000487952 UBR1Q8IWV7 1749 aa20.32■□□□□ 0.84
NUP188-207ENST00000487952 KDM5AP29375 1690 aaKnown RBP20.32■□□□□ 0.84
NUP188-207ENST00000487952 HDGFP51858 240 aaKnown RBP20.31■□□□□ 0.84
NUP188-207ENST00000487952 TONSLQ96HA7 1378 aa20.31■□□□□ 0.84
NUP188-207ENST00000487952 LMTK3Q96Q04 1460 aa20.3■□□□□ 0.84
NUP188-207ENST00000487952 NEURL4Q96JN8 1562 aa20.29■□□□□ 0.84
NUP188-207ENST00000487952 RPGRIP1LQ68CZ1 1315 aa20.29■□□□□ 0.84
NUP188-207ENST00000487952 EID1Q9Y6B2 187 aa20.29■□□□□ 0.84
NUP188-207ENST00000487952 TMEM2Q9UHN6 1383 aa20.29■□□□□ 0.84
NUP188-207ENST00000487952 RIMS2Q9UQ26 1411 aa20.28■□□□□ 0.84
NUP188-207ENST00000487952 PPP1R15AO75807 674 aaPredicted RBP20.28■□□□□ 0.84
NUP188-207ENST00000487952 HSPA2P54652 639 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms