RNA–Protein interactions for RNA: ENST00000487519.5

TFAM-204, Transcript of transcription factor A, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAM, Length 5,414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-204ENST00000487519 GTF2E1P29083 439 aaPredicted RBP17.5■□□□□ 0.39
TFAM-204ENST00000487519 GPATCH3Q96I76 525 aa17.5■□□□□ 0.39
TFAM-204ENST00000487519 TCERG1O14776 1098 aaKnown RBP17.49■□□□□ 0.39
TFAM-204ENST00000487519 HSP90B1P14625 803 aaKnown RBP17.49■□□□□ 0.39
TFAM-204ENST00000487519 LMOD3Q0VAK6 560 aa17.49■□□□□ 0.39
TFAM-204ENST00000487519 CYB5RLQ6IPT4 315 aa17.49■□□□□ 0.39
TFAM-204ENST00000487519 HDAC5Q9UQL6 1122 aa17.48■□□□□ 0.39
TFAM-204ENST00000487519 PANK3Q9H999 370 aa17.48■□□□□ 0.39
TFAM-204ENST00000487519 G3V3G9 751 aa17.47■□□□□ 0.39
TFAM-204ENST00000487519 DCAF8Q5TAQ9 597 aa17.47■□□□□ 0.39
TFAM-204ENST00000487519 FRAT2O75474 233 aaPredicted RBP17.47■□□□□ 0.39
TFAM-204ENST00000487519 BCL2L13Q9BXK5 485 aa17.46■□□□□ 0.39
TFAM-204ENST00000487519 FOXD4L1Q9NU39 408 aa17.46■□□□□ 0.39
TFAM-204ENST00000487519 TOMM22Q9NS69 142 aa17.46■□□□□ 0.39
TFAM-204ENST00000487519 DEKP35659 375 aaKnown RBP17.46■□□□□ 0.39
TFAM-204ENST00000487519 CCDC144AA2RUR9 1427 aa17.45■□□□□ 0.38
TFAM-204ENST00000487519 HTATSF1O43719 755 aaKnown RBP17.43■□□□□ 0.38
TFAM-204ENST00000487519 MINK1Q8N4C8 1332 aaPredicted RBP17.43■□□□□ 0.38
TFAM-204ENST00000487519 COG3Q96JB2 828 aa17.42■□□□□ 0.38
TFAM-204ENST00000487519 VGFO15240 615 aaPredicted RBP17.4■□□□□ 0.38
TFAM-204ENST00000487519 PDE3BQ13370 1112 aa17.4■□□□□ 0.38
TFAM-204ENST00000487519 RASSF8Q8NHQ8 419 aa17.4■□□□□ 0.38
TFAM-204ENST00000487519 WIZO95785 1651 aa17.39■□□□□ 0.37
TFAM-204ENST00000487519 PTPRGP23470 1445 aa17.39■□□□□ 0.37
TFAM-204ENST00000487519 KIF15Q9NS87 1388 aa17.39■□□□□ 0.37
TFAM-204ENST00000487519 NGEFQ8N5V2 710 aa17.38■□□□□ 0.37
TFAM-204ENST00000487519 MYBBP1AQ9BQG0 1328 aaKnown RBP17.38■□□□□ 0.37
TFAM-204ENST00000487519 KIAA2012Q0VF49 1180 aa17.38■□□□□ 0.37
TFAM-204ENST00000487519 C1orf141Q5JVX7 400 aa17.38■□□□□ 0.37
TFAM-204ENST00000487519 EVA1CP58658 441 aa17.38■□□□□ 0.37
TFAM-204ENST00000487519 FOXD4L5Q5VV16 416 aaPredicted RBP17.38■□□□□ 0.37
TFAM-204ENST00000487519 FOXD4L4Q8WXT5 416 aaPredicted RBP17.38■□□□□ 0.37
TFAM-204ENST00000487519 SYAP1Q96A49 352 aaPredicted RBP17.37■□□□□ 0.37
TFAM-204ENST00000487519 PLIN1O60240 522 aa17.37■□□□□ 0.37
TFAM-204ENST00000487519 TEFQ10587 303 aa17.37■□□□□ 0.37
TFAM-204ENST00000487519 CGNL1Q0VF96 1302 aa17.37■□□□□ 0.37
TFAM-204ENST00000487519 EVC2Q86UK5 1308 aa17.37■□□□□ 0.37
TFAM-204ENST00000487519 TOP2AP11388 1531 aaKnown RBP17.37■□□□□ 0.37
TFAM-204ENST00000487519 CREBRFQ8IUR6 639 aa17.36■□□□□ 0.37
TFAM-204ENST00000487519 PHLDB1Q86UU1 1377 aa17.36■□□□□ 0.37
TFAM-204ENST00000487519 PTMSP20962 102 aa17.35■□□□□ 0.37
TFAM-204ENST00000487519 RILPL2Q969X0 211 aa17.35■□□□□ 0.37
TFAM-204ENST00000487519 EIF2S2P20042 333 aaKnown RBP17.34■□□□□ 0.37
TFAM-204ENST00000487519 CCDC34Q96HJ3 373 aa17.34■□□□□ 0.37
TFAM-204ENST00000487519 ANKRD45Q5TZF3 282 aa17.33■□□□□ 0.37
TFAM-204ENST00000487519 MSH5O43196 834 aa17.33■□□□□ 0.36
TFAM-204ENST00000487519 ARID3AQ99856 593 aa17.33■□□□□ 0.36
TFAM-204ENST00000487519 PDE4CQ08493 712 aa17.32■□□□□ 0.36
TFAM-204ENST00000487519 NECTIN2Q92692 538 aa17.32■□□□□ 0.36
TFAM-204ENST00000487519 KIF16BQ96L93 1317 aa17.32■□□□□ 0.36
TFAM-204ENST00000487519 APAF1O14727 1248 aa17.31■□□□□ 0.36
TFAM-204ENST00000487519 VPS53Q5VIR6 699 aa17.31■□□□□ 0.36
TFAM-204ENST00000487519 UACAQ9BZF9 1416 aa17.31■□□□□ 0.36
TFAM-204ENST00000487519 ST18O60284 1047 aa17.31■□□□□ 0.36
TFAM-204ENST00000487519 TPM4P67936 248 aa17.31■□□□□ 0.36
TFAM-204ENST00000487519 TTC5Q8N0Z6 440 aa17.3■□□□□ 0.36
TFAM-204ENST00000487519 ZKSCAN2Q63HK3 967 aa17.3■□□□□ 0.36
TFAM-204ENST00000487519 COG6Q9Y2V7 657 aa17.3■□□□□ 0.36
TFAM-204ENST00000487519 OSCARQ8IYS5 282 aa17.3■□□□□ 0.36
TFAM-204ENST00000487519 IPO9Q96P70 1041 aaKnown RBP17.3■□□□□ 0.36
TFAM-204ENST00000487519 PRKRIP1Q9H875 184 aaPredicted RBP17.3■□□□□ 0.36
TFAM-204ENST00000487519 USP47Q96K76 1375 aa17.3■□□□□ 0.36
TFAM-204ENST00000487519 MARCH6O60337 910 aa17.3■□□□□ 0.36
TFAM-204ENST00000487519 SF3A1Q15459 793 aaKnown RBP17.29■□□□□ 0.36
TFAM-204ENST00000487519 SYTL4Q96C24 671 aaPredicted RBP17.29■□□□□ 0.36
TFAM-204ENST00000487519 NOC3LQ8WTT2 800 aaKnown RBP17.29■□□□□ 0.36
TFAM-204ENST00000487519 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
TFAM-204ENST00000487519 DHX57Q6P158 1386 aaKnown RBP17.29■□□□□ 0.36
TFAM-204ENST00000487519 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.29■□□□□ 0.36
TFAM-204ENST00000487519 ATAD2BQ9ULI0 1458 aa17.28■□□□□ 0.36
TFAM-204ENST00000487519 FANCD2Q9BXW9 1451 aa17.28■□□□□ 0.36
TFAM-204ENST00000487519 GOLGA6L3A6NEY3 463 aa17.28■□□□□ 0.36
TFAM-204ENST00000487519 E9PSI1 815 aa17.28■□□□□ 0.36
TFAM-204ENST00000487519 FOXD4L6Q3SYB3 417 aaPredicted RBP17.27■□□□□ 0.36
TFAM-204ENST00000487519 FOXD4L3Q6VB84 417 aaPredicted RBP17.27■□□□□ 0.36
TFAM-204ENST00000487519 PSME1Q06323 249 aa17.27■□□□□ 0.36
TFAM-204ENST00000487519 NEXNQ0ZGT2 675 aa17.27■□□□□ 0.35
TFAM-204ENST00000487519 C9orf78Q9NZ63 289 aaPredicted RBP17.27■□□□□ 0.35
TFAM-204ENST00000487519 TSHZ2Q9NRE2 1034 aa17.26■□□□□ 0.35
TFAM-204ENST00000487519 CSPP1Q1MSJ5 1256 aa17.26■□□□□ 0.35
TFAM-204ENST00000487519 EXOC6Q8TAG9 804 aa17.26■□□□□ 0.35
TFAM-204ENST00000487519 DIAPH1O60610 1272 aaKnown RBP17.26■□□□□ 0.35
TFAM-204ENST00000487519 KIF3AQ9Y496 699 aa17.26■□□□□ 0.35
TFAM-204ENST00000487519 FAM69CQ0P6D2 419 aa17.24■□□□□ 0.35
TFAM-204ENST00000487519 CRBNQ96SW2 442 aa17.24■□□□□ 0.35
TFAM-204ENST00000487519 H3BQV1 296 aa17.24■□□□□ 0.35
TFAM-204ENST00000487519 IFFO2Q5TF58 517 aa17.24■□□□□ 0.35
TFAM-204ENST00000487519 SLC4A3P48751 1232 aa17.23■□□□□ 0.35
TFAM-204ENST00000487519 RIPK4P57078 832 aa17.23■□□□□ 0.35
TFAM-204ENST00000487519 CENPQQ7L2Z9 268 aaPredicted RBP17.23■□□□□ 0.35
TFAM-204ENST00000487519 DIAPH3Q9NSV4 1193 aa17.22■□□□□ 0.35
TFAM-204ENST00000487519 ZNF644Q9H582 1327 aaPredicted RBP17.22■□□□□ 0.35
TFAM-204ENST00000487519 FAM184AQ8NB25 1140 aa17.22■□□□□ 0.35
TFAM-204ENST00000487519 RAD21O60216 631 aa17.22■□□□□ 0.35
TFAM-204ENST00000487519 PES1O00541 588 aaKnown RBP17.21■□□□□ 0.35
TFAM-204ENST00000487519 RRP1P56182 461 aaKnown RBP17.21■□□□□ 0.35
TFAM-204ENST00000487519 FKBP5Q13451 457 aaPredicted RBP17.2■□□□□ 0.34
TFAM-204ENST00000487519 AKAP17AQ02040 695 aaKnown RBP17.2■□□□□ 0.34
TFAM-204ENST00000487519 ANO8Q9HCE9 1232 aaPredicted RBP17.19■□□□□ 0.34
TFAM-204ENST00000487519 NUTM2GQ5VZR2 741 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms