RNA–Protein interactions for RNA: ENST00000487424.2

RBP1-204, Transcript of retinol binding protein 1, humanhuman

TSL 1 (best)

Gene RBP1, Length 1,072 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1-204ENST00000487424 PTPRKQ15262 1439 aa23.4■■□□□ 1.34
RBP1-204ENST00000487424 CEBPAP49715 358 aaPredicted RBP23.38■■□□□ 1.33
RBP1-204ENST00000487424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.38■■□□□ 1.33
RBP1-204ENST00000487424 RIMS1Q86UR5 1692 aaKnown RBP23.38■■□□□ 1.33
RBP1-204ENST00000487424 FER1L4A9Z1Z3 1794 aa23.37■■□□□ 1.33
RBP1-204ENST00000487424 ANKRD50Q9ULJ7 1429 aa23.37■■□□□ 1.33
RBP1-204ENST00000487424 ZMYM3Q14202 1370 aa23.37■■□□□ 1.33
RBP1-204ENST00000487424 KANK1Q14678 1352 aa23.37■■□□□ 1.33
RBP1-204ENST00000487424 EIF2AK4Q9P2K8 1649 aaKnown RBP23.33■■□□□ 1.33
RBP1-204ENST00000487424 FAM135AQ9P2D6 1515 aa23.3■■□□□ 1.32
RBP1-204ENST00000487424 KDM5DQ9BY66 1539 aa23.28■■□□□ 1.32
RBP1-204ENST00000487424 RNF17Q9BXT8 1623 aaKnown RBP23.26■■□□□ 1.31
RBP1-204ENST00000487424 CLTCQ00610 1675 aaKnown RBP23.24■■□□□ 1.31
RBP1-204ENST00000487424 NPATQ14207 1427 aa23.23■■□□□ 1.31
RBP1-204ENST00000487424 MROH2AA6NES4 1674 aa23.22■■□□□ 1.31
RBP1-204ENST00000487424 ABCC3O15438 1527 aa23.19■■□□□ 1.3
RBP1-204ENST00000487424 HFM1A2PYH4 1435 aa23.19■■□□□ 1.3
RBP1-204ENST00000487424 C3P01024 1663 aa23.19■■□□□ 1.3
RBP1-204ENST00000487424 PRDM15P57071 1507 aaPredicted RBP23.18■■□□□ 1.3
RBP1-204ENST00000487424 NAIPQ13075 1403 aa23.18■■□□□ 1.3
RBP1-204ENST00000487424 NUP155O75694 1391 aa23.18■■□□□ 1.3
RBP1-204ENST00000487424 FBXO31Q5XUX0 539 aaPredicted RBP23.18■■□□□ 1.3
RBP1-204ENST00000487424 UHRF1BP1Q6BDS2 1440 aa23.17■■□□□ 1.3
RBP1-204ENST00000487424 ACIN1Q9UKV3 1341 aaKnown RBP23.17■■□□□ 1.3
RBP1-204ENST00000487424 TRIM52Q96A61 297 aa23.17■■□□□ 1.3
RBP1-204ENST00000487424 PZPP20742 1482 aa23.17■■□□□ 1.3
RBP1-204ENST00000487424 ZC3H13Q5T200 1668 aaKnown RBP23.16■■□□□ 1.3
RBP1-204ENST00000487424 MROH1Q8NDA8 1641 aa23.15■■□□□ 1.3
RBP1-204ENST00000487424 DEPDC5O75140 1603 aa23.15■■□□□ 1.3
RBP1-204ENST00000487424 TNRQ92752 1358 aa23.14■■□□□ 1.29
RBP1-204ENST00000487424 ARHGAP31Q2M1Z3 1444 aa23.13■■□□□ 1.29
RBP1-204ENST00000487424 SETD1BQ9UPS6 1966 aaKnown RBP23.12■■□□□ 1.29
RBP1-204ENST00000487424 LMTK2Q8IWU2 1503 aa23.11■■□□□ 1.29
RBP1-204ENST00000487424 HSPA2P54652 639 aa23.08■■□□□ 1.29
RBP1-204ENST00000487424 LMTK3Q96Q04 1460 aa23.08■■□□□ 1.29
RBP1-204ENST00000487424 VWDEQ8N2E2 1590 aa23.08■■□□□ 1.29
RBP1-204ENST00000487424 SETD5Q9C0A6 1442 aa23.08■■□□□ 1.28
RBP1-204ENST00000487424 UNC13BO14795 1591 aa23.06■■□□□ 1.28
RBP1-204ENST00000487424 CAMSAP1Q5T5Y3 1602 aa23.06■■□□□ 1.28
RBP1-204ENST00000487424 PREX1Q8TCU6 1659 aa23.06■■□□□ 1.28
RBP1-204ENST00000487424 CEP152O94986 1710 aa23.05■■□□□ 1.28
RBP1-204ENST00000487424 GCC2Q8IWJ2 1684 aa23.05■■□□□ 1.28
RBP1-204ENST00000487424 THEMISQ8N1K5 641 aaPredicted RBP23.04■■□□□ 1.28
RBP1-204ENST00000487424 ERVK-7P63135 1459 aa23.04■■□□□ 1.28
RBP1-204ENST00000487424 SLC4A1APQ9BWU0 796 aaKnown RBP23.03■■□□□ 1.28
RBP1-204ENST00000487424 STAG3Q9UJ98 1225 aa23.03■■□□□ 1.28
RBP1-204ENST00000487424 RPRD2Q5VT52 1461 aaKnown RBP23.03■■□□□ 1.28
RBP1-204ENST00000487424 NLRP1Q9C000 1473 aa23.03■■□□□ 1.28
RBP1-204ENST00000487424 SLC52A1Q9NWF4 448 aa23.02■■□□□ 1.28
RBP1-204ENST00000487424 EFCAB6Q5THR3 1501 aa23.01■■□□□ 1.27
RBP1-204ENST00000487424 SPATA31D1Q6ZQQ2 1576 aa23■■□□□ 1.27
RBP1-204ENST00000487424 A2ML1A8K2U0 1454 aa22.99■■□□□ 1.27
RBP1-204ENST00000487424 TRIM26Q12899 539 aaPredicted RBP22.99■■□□□ 1.27
RBP1-204ENST00000487424 DMRT2Q9Y5R5 561 aa22.99■■□□□ 1.27
RBP1-204ENST00000487424 IQGAP3Q86VI3 1631 aa22.99■■□□□ 1.27
RBP1-204ENST00000487424 TET3O43151 1660 aa22.98■■□□□ 1.27
RBP1-204ENST00000487424 HRCP23327 699 aa22.98■■□□□ 1.27
RBP1-204ENST00000487424 PKD2Q13563 968 aa22.96■■□□□ 1.27
RBP1-204ENST00000487424 RAB3GAP2Q9H2M9 1393 aa22.96■■□□□ 1.27
RBP1-204ENST00000487424 IDI1Q13907 227 aa22.95■■□□□ 1.26
RBP1-204ENST00000487424 MYO3AQ8NEV4 1616 aa22.95■■□□□ 1.26
RBP1-204ENST00000487424 CEP170BQ9Y4F5 1589 aaPredicted RBP22.95■■□□□ 1.26
RBP1-204ENST00000487424 NOS1P29475 1434 aa22.94■■□□□ 1.26
RBP1-204ENST00000487424 MPHOSPH9Q99550 1183 aa22.94■■□□□ 1.26
RBP1-204ENST00000487424 ANKLE2Q86XL3 938 aa22.92■■□□□ 1.26
RBP1-204ENST00000487424 CFAP65Q6ZU64 1925 aaKnown RBP22.92■■□□□ 1.26
RBP1-204ENST00000487424 UGGT1Q9NYU2 1555 aa22.91■■□□□ 1.26
RBP1-204ENST00000487424 CHGAP10645 457 aaKnown RBP22.9■■□□□ 1.26
RBP1-204ENST00000487424 HDGFP51858 240 aaKnown RBP22.88■■□□□ 1.25
RBP1-204ENST00000487424 EID1Q9Y6B2 187 aa22.88■■□□□ 1.25
RBP1-204ENST00000487424 ZNF142P52746 1687 aaPredicted RBP22.87■■□□□ 1.25
RBP1-204ENST00000487424 NCKAP5LQ9HCH0 1330 aa22.87■■□□□ 1.25
RBP1-204ENST00000487424 PLA2R1Q13018 1463 aa22.86■■□□□ 1.25
RBP1-204ENST00000487424 E9PCH4 1651 aa22.85■■□□□ 1.25
RBP1-204ENST00000487424 PTPRTO14522 1441 aa22.83■■□□□ 1.25
RBP1-204ENST00000487424 TXNDC2Q86VQ3 553 aa22.83■■□□□ 1.25
RBP1-204ENST00000487424 SYNMO15061 1565 aa22.82■■□□□ 1.24
RBP1-204ENST00000487424 FOXD1Q16676 465 aa22.82■■□□□ 1.24
RBP1-204ENST00000487424 TMEM2Q9UHN6 1383 aa22.79■■□□□ 1.24
RBP1-204ENST00000487424 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.78■■□□□ 1.24
RBP1-204ENST00000487424 PPP1R15AO75807 674 aaPredicted RBP22.77■■□□□ 1.24
RBP1-204ENST00000487424 ZNF326Q5BKZ1 582 aaKnown RBP22.77■■□□□ 1.24
RBP1-204ENST00000487424 PIK3C2BO00750 1634 aa22.77■■□□□ 1.24
RBP1-204ENST00000487424 BCANQ96GW7 911 aa22.76■■□□□ 1.23
RBP1-204ENST00000487424 UBR1Q8IWV7 1749 aa22.74■■□□□ 1.23
RBP1-204ENST00000487424 ADGRB3O60242 1522 aa22.74■■□□□ 1.23
RBP1-204ENST00000487424 TRPM2O94759 1503 aa22.73■■□□□ 1.23
RBP1-204ENST00000487424 LTKP29376 864 aa22.73■■□□□ 1.23
RBP1-204ENST00000487424 CCDC144AA2RUR9 1427 aa22.73■■□□□ 1.23
RBP1-204ENST00000487424 KDM5AP29375 1690 aaKnown RBP22.72■■□□□ 1.23
RBP1-204ENST00000487424 SPHKAPQ2M3C7 1700 aa22.72■■□□□ 1.23
RBP1-204ENST00000487424 STRCQ7RTU9 1775 aa22.72■■□□□ 1.23
RBP1-204ENST00000487424 SCAF11Q99590 1463 aaKnown RBP22.72■■□□□ 1.23
RBP1-204ENST00000487424 SLIT1O75093 1534 aa22.72■■□□□ 1.23
RBP1-204ENST00000487424 NPHP4O75161 1426 aaPredicted RBP22.71■■□□□ 1.23
RBP1-204ENST00000487424 ARHGAP23Q9P227 1491 aa22.71■■□□□ 1.23
RBP1-204ENST00000487424 RIMS2Q9UQ26 1411 aa22.68■■□□□ 1.22
RBP1-204ENST00000487424 MED14O60244 1454 aa22.67■■□□□ 1.22
RBP1-204ENST00000487424 TMEM131LA2VDJ0 1609 aa22.67■■□□□ 1.22
RBP1-204ENST00000487424 RPGRIP1LQ68CZ1 1315 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms