RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 KIF3BO15066 747 aa11.65□□□□□ -0.54
ZNF541-204ENST00000487275 FOXD1Q16676 465 aa11.65□□□□□ -0.54
ZNF541-204ENST00000487275 ZMYM4Q5VZL5 1548 aa11.65□□□□□ -0.55
ZNF541-204ENST00000487275 FAM135AQ9P2D6 1515 aa11.65□□□□□ -0.55
ZNF541-204ENST00000487275 EIF2AK4Q9P2K8 1649 aaKnown RBP11.64□□□□□ -0.55
ZNF541-204ENST00000487275 MAGI2Q86UL8 1455 aa11.64□□□□□ -0.55
ZNF541-204ENST00000487275 KANK1Q14678 1352 aa11.64□□□□□ -0.55
ZNF541-204ENST00000487275 ABCA6Q8N139 1617 aa11.64□□□□□ -0.55
ZNF541-204ENST00000487275 TIMELESSQ9UNS1 1208 aa11.63□□□□□ -0.55
ZNF541-204ENST00000487275 ANKRD30BQ9BXX2 1392 aa11.63□□□□□ -0.55
ZNF541-204ENST00000487275 DIP2CQ9Y2E4 1556 aa11.62□□□□□ -0.55
ZNF541-204ENST00000487275 YEATS2Q9ULM3 1422 aa11.62□□□□□ -0.55
ZNF541-204ENST00000487275 IQGAP3Q86VI3 1631 aa11.62□□□□□ -0.55
ZNF541-204ENST00000487275 TONSLQ96HA7 1378 aa11.62□□□□□ -0.55
ZNF541-204ENST00000487275 COL17A1Q9UMD9 1497 aaPredicted RBP11.61□□□□□ -0.55
ZNF541-204ENST00000487275 DEPDC5O75140 1603 aa11.6□□□□□ -0.55
ZNF541-204ENST00000487275 ATP10AO60312 1499 aa11.59□□□□□ -0.55
ZNF541-204ENST00000487275 PRDM15P57071 1507 aaPredicted RBP11.59□□□□□ -0.55
ZNF541-204ENST00000487275 GGT6Q6P531 493 aa11.58□□□□□ -0.56
ZNF541-204ENST00000487275 RNF17Q9BXT8 1623 aaKnown RBP11.57□□□□□ -0.56
ZNF541-204ENST00000487275 VWDEQ8N2E2 1590 aa11.57□□□□□ -0.56
ZNF541-204ENST00000487275 BCORL1Q5H9F3 1711 aa11.57□□□□□ -0.56
ZNF541-204ENST00000487275 RPRD2Q5VT52 1461 aaKnown RBP11.57□□□□□ -0.56
ZNF541-204ENST00000487275 MROH1Q8NDA8 1641 aa11.57□□□□□ -0.56
ZNF541-204ENST00000487275 ARHGEF40Q8TER5 1519 aa11.55□□□□□ -0.56
ZNF541-204ENST00000487275 REREQ9P2R6 1566 aa11.55□□□□□ -0.56
ZNF541-204ENST00000487275 TET3O43151 1660 aa11.55□□□□□ -0.56
ZNF541-204ENST00000487275 LMTK2Q8IWU2 1503 aa11.54□□□□□ -0.56
ZNF541-204ENST00000487275 WASHC2CQ9Y4E1 1318 aa11.54□□□□□ -0.56
ZNF541-204ENST00000487275 CCDC144AA2RUR9 1427 aa11.53□□□□□ -0.56
ZNF541-204ENST00000487275 PPP1R15AO75807 674 aaPredicted RBP11.53□□□□□ -0.56
ZNF541-204ENST00000487275 AGLP35573 1532 aa11.53□□□□□ -0.56
ZNF541-204ENST00000487275 ABCC3O15438 1527 aa11.51□□□□□ -0.57
ZNF541-204ENST00000487275 EFCAB6Q5THR3 1501 aa11.51□□□□□ -0.57
ZNF541-204ENST00000487275 L3MBTL2Q969R5 705 aa11.51□□□□□ -0.57
ZNF541-204ENST00000487275 E9PCH4 1651 aa11.51□□□□□ -0.57
ZNF541-204ENST00000487275 PLA2R1Q13018 1463 aa11.51□□□□□ -0.57
ZNF541-204ENST00000487275 CEP152O94986 1710 aa11.5□□□□□ -0.57
ZNF541-204ENST00000487275 PPP6R1Q9UPN7 881 aa11.5□□□□□ -0.57
ZNF541-204ENST00000487275 PTPRTO14522 1441 aa11.49□□□□□ -0.57
ZNF541-204ENST00000487275 TRPM2O94759 1503 aa11.49□□□□□ -0.57
ZNF541-204ENST00000487275 ZC3H13Q5T200 1668 aaKnown RBP11.49□□□□□ -0.57
ZNF541-204ENST00000487275 MLECQ14165 292 aa11.48□□□□□ -0.57
ZNF541-204ENST00000487275 ARID4BQ4LE39 1312 aaPredicted RBP11.48□□□□□ -0.57
ZNF541-204ENST00000487275 SPHKAPQ2M3C7 1700 aa11.47□□□□□ -0.57
ZNF541-204ENST00000487275 NPATQ14207 1427 aa11.47□□□□□ -0.57
ZNF541-204ENST00000487275 CAMSAP1Q5T5Y3 1602 aa11.46□□□□□ -0.57
ZNF541-204ENST00000487275 ZNF316A6NFI3 1004 aaPredicted RBP11.46□□□□□ -0.57
ZNF541-204ENST00000487275 ESF1Q9H501 851 aaKnown RBP11.46□□□□□ -0.57
ZNF541-204ENST00000487275 ARHGAP31Q2M1Z3 1444 aa11.45□□□□□ -0.58
ZNF541-204ENST00000487275 RGL3Q3MIN7 710 aa11.45□□□□□ -0.58
ZNF541-204ENST00000487275 CNTLNQ9NXG0 1405 aa11.44□□□□□ -0.58
ZNF541-204ENST00000487275 SIGLEC1Q9BZZ2 1709 aa11.44□□□□□ -0.58
ZNF541-204ENST00000487275 CLTCL1P53675 1640 aa11.43□□□□□ -0.58
ZNF541-204ENST00000487275 DCAF11Q8TEB1 546 aa11.43□□□□□ -0.58
ZNF541-204ENST00000487275 ZNF326Q5BKZ1 582 aaKnown RBP11.42□□□□□ -0.58
ZNF541-204ENST00000487275 KDM2AQ9Y2K7 1162 aa11.42□□□□□ -0.58
ZNF541-204ENST00000487275 NOS1P29475 1434 aa11.42□□□□□ -0.58
ZNF541-204ENST00000487275 NBPF8Q3BBV2 869 aa11.41□□□□□ -0.58
ZNF541-204ENST00000487275 SPATA31E1Q6ZUB1 1445 aa11.41□□□□□ -0.58
ZNF541-204ENST00000487275 CLTCQ00610 1675 aaKnown RBP11.4□□□□□ -0.58
ZNF541-204ENST00000487275 CHGAP10645 457 aaKnown RBP11.4□□□□□ -0.58
ZNF541-204ENST00000487275 UHRF1BP1Q6BDS2 1440 aa11.4□□□□□ -0.58
ZNF541-204ENST00000487275 UGGT1Q9NYU2 1555 aa11.4□□□□□ -0.58
ZNF541-204ENST00000487275 ERVK-7P63135 1459 aa11.38□□□□□ -0.59
ZNF541-204ENST00000487275 NEURL4Q96JN8 1562 aa11.38□□□□□ -0.59
ZNF541-204ENST00000487275 STAC3Q96MF2 364 aa11.38□□□□□ -0.59
ZNF541-204ENST00000487275 SLC52A1Q9NWF4 448 aa11.38□□□□□ -0.59
ZNF541-204ENST00000487275 ZMYM3Q14202 1370 aa11.38□□□□□ -0.59
ZNF541-204ENST00000487275 PREX1Q8TCU6 1659 aa11.37□□□□□ -0.59
ZNF541-204ENST00000487275 FBXO31Q5XUX0 539 aaPredicted RBP11.37□□□□□ -0.59
ZNF541-204ENST00000487275 KIF1BO60333 1816 aa11.37□□□□□ -0.59
ZNF541-204ENST00000487275 SYNMO15061 1565 aa11.37□□□□□ -0.59
ZNF541-204ENST00000487275 CFAP65Q6ZU64 1925 aaKnown RBP11.37□□□□□ -0.59
ZNF541-204ENST00000487275 PRAG1Q86YV5 1406 aa11.36□□□□□ -0.59
ZNF541-204ENST00000487275 ADGRB3O60242 1522 aa11.35□□□□□ -0.59
ZNF541-204ENST00000487275 EIF4G2P78344 907 aaKnown RBP eCLIP11.35□□□□□ -0.59
ZNF541-204ENST00000487275 IDI1Q13907 227 aa11.35□□□□□ -0.59
ZNF541-204ENST00000487275 RALGAPBQ86X10 1494 aa11.35□□□□□ -0.59
ZNF541-204ENST00000487275 PIK3C2BO00750 1634 aa11.35□□□□□ -0.59
ZNF541-204ENST00000487275 SPATA31D1Q6ZQQ2 1576 aa11.34□□□□□ -0.59
ZNF541-204ENST00000487275 RPGRIP1LQ68CZ1 1315 aa11.34□□□□□ -0.59
ZNF541-204ENST00000487275 ROCK2O75116 1388 aaKnown RBP11.33□□□□□ -0.6
ZNF541-204ENST00000487275 HSPA5P11021 654 aaKnown RBP11.33□□□□□ -0.6
ZNF541-204ENST00000487275 CARD11Q9BXL7 1154 aa11.33□□□□□ -0.6
ZNF541-204ENST00000487275 STAG3Q9UJ98 1225 aa11.33□□□□□ -0.6
ZNF541-204ENST00000487275 MROH2AA6NES4 1674 aa11.33□□□□□ -0.6
ZNF541-204ENST00000487275 HIRIP3Q9BW71 556 aaPredicted RBP11.32□□□□□ -0.6
ZNF541-204ENST00000487275 MYOM2P54296 1465 aa11.32□□□□□ -0.6
ZNF541-204ENST00000487275 TNRQ92752 1358 aa11.31□□□□□ -0.6
ZNF541-204ENST00000487275 FER1L4A9Z1Z3 1794 aa11.31□□□□□ -0.6
ZNF541-204ENST00000487275 DIEXFQ68CQ4 756 aaKnown RBP11.3□□□□□ -0.6
ZNF541-204ENST00000487275 TRPM1Q7Z4N2 1603 aa11.3□□□□□ -0.6
ZNF541-204ENST00000487275 MADDQ8WXG6 1647 aa11.3□□□□□ -0.6
ZNF541-204ENST00000487275 USP47Q96K76 1375 aa11.29□□□□□ -0.6
ZNF541-204ENST00000487275 PLPPR3Q6T4P5 718 aa11.29□□□□□ -0.6
ZNF541-204ENST00000487275 ADGRF5Q8IZF2 1346 aa11.29□□□□□ -0.6
ZNF541-204ENST00000487275 VGFO15240 615 aaPredicted RBP11.28□□□□□ -0.6
ZNF541-204ENST00000487275 CEBPAP49715 358 aaPredicted RBP11.28□□□□□ -0.6
ZNF541-204ENST00000487275 NBPF1Q3BBV0 1214 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms