RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 PIP4K2BP78356 416 aa12.57□□□□□ -0.4
PDPN-205ENST00000487038 GGT6Q6P531 493 aa12.57□□□□□ -0.4
PDPN-205ENST00000487038 KDM5DQ9BY66 1539 aa12.57□□□□□ -0.4
PDPN-205ENST00000487038 HNRNPMP52272 730 aaKnown RBP eCLIP12.55□□□□□ -0.4
PDPN-205ENST00000487038 VWDEQ8N2E2 1590 aa12.55□□□□□ -0.4
PDPN-205ENST00000487038 CCNB3Q8WWL7 1395 aa12.54□□□□□ -0.4
PDPN-205ENST00000487038 PZPP20742 1482 aa12.53□□□□□ -0.4
PDPN-205ENST00000487038 TIAM1Q13009 1591 aa12.53□□□□□ -0.4
PDPN-205ENST00000487038 UGGT1Q9NYU2 1555 aa12.53□□□□□ -0.4
PDPN-205ENST00000487038 CFDP1Q9UEE9 299 aaPredicted RBP12.53□□□□□ -0.4
PDPN-205ENST00000487038 ZC3H13Q5T200 1668 aaKnown RBP12.53□□□□□ -0.4
PDPN-205ENST00000487038 TNRQ92752 1358 aa12.53□□□□□ -0.4
PDPN-205ENST00000487038 RTEL1-TNFRSF6BF6WH68 1400 aa12.52□□□□□ -0.41
PDPN-205ENST00000487038 NLRP1Q9C000 1473 aa12.52□□□□□ -0.41
PDPN-205ENST00000487038 EHBP1L1Q8N3D4 1523 aa12.52□□□□□ -0.41
PDPN-205ENST00000487038 ALKQ9UM73 1620 aa12.51□□□□□ -0.41
PDPN-205ENST00000487038 MED14O60244 1454 aa12.51□□□□□ -0.41
PDPN-205ENST00000487038 STRCP1A6NGW2 1772 aa12.51□□□□□ -0.41
PDPN-205ENST00000487038 NPHP4O75161 1426 aaPredicted RBP12.49□□□□□ -0.41
PDPN-205ENST00000487038 MTUS2Q5JR59 1369 aa12.49□□□□□ -0.41
PDPN-205ENST00000487038 ANKLE2Q86XL3 938 aa12.48□□□□□ -0.41
PDPN-205ENST00000487038 DHX29Q7Z478 1369 aaKnown RBP12.47□□□□□ -0.41
PDPN-205ENST00000487038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.47□□□□□ -0.41
PDPN-205ENST00000487038 THEMISQ8N1K5 641 aaPredicted RBP12.47□□□□□ -0.41
PDPN-205ENST00000487038 CCDC141Q6ZP82 1450 aa12.46□□□□□ -0.41
PDPN-205ENST00000487038 MBD5Q9P267 1494 aa12.46□□□□□ -0.41
PDPN-205ENST00000487038 LRRC7Q96NW7 1537 aa12.45□□□□□ -0.42
PDPN-205ENST00000487038 UBR1Q8IWV7 1749 aa12.45□□□□□ -0.42
PDPN-205ENST00000487038 EIF2AK4Q9P2K8 1649 aaKnown RBP12.44□□□□□ -0.42
PDPN-205ENST00000487038 XIRP1Q702N8 1843 aaKnown RBP12.44□□□□□ -0.42
PDPN-205ENST00000487038 MIA2Q96PC5 1412 aa12.44□□□□□ -0.42
PDPN-205ENST00000487038 WASHC2CQ9Y4E1 1318 aa12.43□□□□□ -0.42
PDPN-205ENST00000487038 KIF3BO15066 747 aa12.43□□□□□ -0.42
PDPN-205ENST00000487038 CEP152O94986 1710 aa12.42□□□□□ -0.42
PDPN-205ENST00000487038 CAMSAP2Q08AD1 1489 aa12.42□□□□□ -0.42
PDPN-205ENST00000487038 FBXO31Q5XUX0 539 aaPredicted RBP12.42□□□□□ -0.42
PDPN-205ENST00000487038 ARHGEF5Q12774 1597 aa12.42□□□□□ -0.42
PDPN-205ENST00000487038 CEP162Q5TB80 1403 aa12.41□□□□□ -0.42
PDPN-205ENST00000487038 CFAP65Q6ZU64 1925 aaKnown RBP12.4□□□□□ -0.42
PDPN-205ENST00000487038 ABCC3O15438 1527 aa12.39□□□□□ -0.43
PDPN-205ENST00000487038 RSPH4AQ5TD94 716 aa12.39□□□□□ -0.43
PDPN-205ENST00000487038 SENP3Q9H4L4 574 aaPredicted RBP12.39□□□□□ -0.43
PDPN-205ENST00000487038 ZNF644Q9H582 1327 aaPredicted RBP12.38□□□□□ -0.43
PDPN-205ENST00000487038 ERVK-7P63135 1459 aa12.38□□□□□ -0.43
PDPN-205ENST00000487038 MAST1Q9Y2H9 1570 aa12.38□□□□□ -0.43
PDPN-205ENST00000487038 SCAF11Q99590 1463 aaKnown RBP12.37□□□□□ -0.43
PDPN-205ENST00000487038 ROBO1Q9Y6N7 1651 aa12.36□□□□□ -0.43
PDPN-205ENST00000487038 SETD1AO15047 1707 aaKnown RBP12.36□□□□□ -0.43
PDPN-205ENST00000487038 KDM5AP29375 1690 aaKnown RBP12.35□□□□□ -0.43
PDPN-205ENST00000487038 NCOA2Q15596 1464 aa12.35□□□□□ -0.43
PDPN-205ENST00000487038 SLIT1O75093 1534 aa12.35□□□□□ -0.43
PDPN-205ENST00000487038 MROH1Q8NDA8 1641 aa12.34□□□□□ -0.43
PDPN-205ENST00000487038 TSPY4P0CV99 314 aa12.33□□□□□ -0.44
PDPN-205ENST00000487038 TSPY10P0CW01 314 aa12.33□□□□□ -0.44
PDPN-205ENST00000487038 CHIC1Q5VXU3 224 aa12.33□□□□□ -0.44
PDPN-205ENST00000487038 LRRC9Q6ZRR7 1453 aa12.33□□□□□ -0.44
PDPN-205ENST00000487038 PIK3C2BO00750 1634 aa12.32□□□□□ -0.44
PDPN-205ENST00000487038 ARHGAP23Q9P227 1491 aa12.32□□□□□ -0.44
PDPN-205ENST00000487038 PHLPP1O60346 1717 aa12.31□□□□□ -0.44
PDPN-205ENST00000487038 FAM135BQ49AJ0 1406 aa12.31□□□□□ -0.44
PDPN-205ENST00000487038 RGS17Q9UGC6 210 aaPredicted RBP12.31□□□□□ -0.44
PDPN-205ENST00000487038 PRDM15P57071 1507 aaPredicted RBP12.31□□□□□ -0.44
PDPN-205ENST00000487038 CROCC2H7BZ55 1655 aa12.3□□□□□ -0.44
PDPN-205ENST00000487038 DUOX2Q9NRD8 1548 aa12.29□□□□□ -0.44
PDPN-205ENST00000487038 EID1Q9Y6B2 187 aa12.28□□□□□ -0.44
PDPN-205ENST00000487038 MAP3K1Q13233 1512 aa12.27□□□□□ -0.44
PDPN-205ENST00000487038 NWD1Q149M9 1564 aa12.27□□□□□ -0.44
PDPN-205ENST00000487038 EFCAB6Q5THR3 1501 aa12.27□□□□□ -0.45
PDPN-205ENST00000487038 TXNDC2Q86VQ3 553 aa12.26□□□□□ -0.45
PDPN-205ENST00000487038 ARHGAP31Q2M1Z3 1444 aa12.26□□□□□ -0.45
PDPN-205ENST00000487038 NKTRP30414 1462 aaKnown RBP12.26□□□□□ -0.45
PDPN-205ENST00000487038 TMEM94Q12767 1356 aa12.24□□□□□ -0.45
PDPN-205ENST00000487038 POTEAQ6S8J7 498 aa12.24□□□□□ -0.45
PDPN-205ENST00000487038 ERBINQ96RT1 1412 aa12.24□□□□□ -0.45
PDPN-205ENST00000487038 LTKP29376 864 aa12.23□□□□□ -0.45
PDPN-205ENST00000487038 TMEM2Q9UHN6 1383 aa12.22□□□□□ -0.45
PDPN-205ENST00000487038 STAG3Q9UJ98 1225 aa12.22□□□□□ -0.45
PDPN-205ENST00000487038 CHD2O14647 1828 aaKnown RBP12.22□□□□□ -0.45
PDPN-205ENST00000487038 TET3O43151 1660 aa12.22□□□□□ -0.45
PDPN-205ENST00000487038 SHPRHQ149N8 1683 aa12.22□□□□□ -0.45
PDPN-205ENST00000487038 COL16A1Q07092 1604 aaPredicted RBP12.22□□□□□ -0.45
PDPN-205ENST00000487038 ADGRB3O60242 1522 aa12.21□□□□□ -0.45
PDPN-205ENST00000487038 MSH6P52701 1360 aa12.21□□□□□ -0.45
PDPN-205ENST00000487038 MYOM3Q5VTT5 1437 aa12.2□□□□□ -0.46
PDPN-205ENST00000487038 KANK1Q14678 1352 aa12.2□□□□□ -0.46
PDPN-205ENST00000487038 JCADQ9P266 1359 aa12.2□□□□□ -0.46
PDPN-205ENST00000487038 MYO5BQ9ULV0 1848 aa12.19□□□□□ -0.46
PDPN-205ENST00000487038 KCNA6P17658 529 aa12.19□□□□□ -0.46
PDPN-205ENST00000487038 GCC2Q8IWJ2 1684 aa12.19□□□□□ -0.46
PDPN-205ENST00000487038 KIF15Q9NS87 1388 aa12.18□□□□□ -0.46
PDPN-205ENST00000487038 LMTK2Q8IWU2 1503 aa12.18□□□□□ -0.46
PDPN-205ENST00000487038 SRCAPQ6ZRS2 3230 aa12.18□□□□□ -0.46
PDPN-205ENST00000487038 PROSER2Q86WR7 435 aaPredicted RBP12.17□□□□□ -0.46
PDPN-205ENST00000487038 PTPN23Q9H3S7 1636 aa12.16□□□□□ -0.46
PDPN-205ENST00000487038 FGD6Q6ZV73 1430 aa12.16□□□□□ -0.46
PDPN-205ENST00000487038 AHDC1Q5TGY3 1603 aaPredicted RBP12.15□□□□□ -0.46
PDPN-205ENST00000487038 SPATA31A6Q5VVP1 1343 aa12.14□□□□□ -0.47
PDPN-205ENST00000487038 MEX3CQ5U5Q3 659 aaKnown RBP12.14□□□□□ -0.47
PDPN-205ENST00000487038 ZNF772Q68DY9 489 aaPredicted RBP12.14□□□□□ -0.47
PDPN-205ENST00000487038 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms