RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 GGT6Q6P531 493 aa24.49■■□□□ 1.51
THBS3-207ENST00000486260 UNC13BO14795 1591 aa24.49■■□□□ 1.51
THBS3-207ENST00000486260 NUP155O75694 1391 aa24.48■■□□□ 1.51
THBS3-207ENST00000486260 DEPDC5O75140 1603 aa24.48■■□□□ 1.51
THBS3-207ENST00000486260 ARID4BQ4LE39 1312 aaPredicted RBP24.48■■□□□ 1.51
THBS3-207ENST00000486260 ACIN1Q9UKV3 1341 aaKnown RBP24.48■■□□□ 1.51
THBS3-207ENST00000486260 RNF17Q9BXT8 1623 aaKnown RBP24.47■■□□□ 1.51
THBS3-207ENST00000486260 MROH1Q8NDA8 1641 aa24.46■■□□□ 1.51
THBS3-207ENST00000486260 MLECQ14165 292 aa24.44■■□□□ 1.5
THBS3-207ENST00000486260 PRDM15P57071 1507 aaPredicted RBP24.43■■□□□ 1.5
THBS3-207ENST00000486260 KDM5DQ9BY66 1539 aa24.42■■□□□ 1.5
THBS3-207ENST00000486260 KANK1Q14678 1352 aa24.42■■□□□ 1.5
THBS3-207ENST00000486260 PZPP20742 1482 aa24.41■■□□□ 1.5
THBS3-207ENST00000486260 MPHOSPH9Q99550 1183 aa24.41■■□□□ 1.5
THBS3-207ENST00000486260 SLC4A1APQ9BWU0 796 aaKnown RBP24.4■■□□□ 1.5
THBS3-207ENST00000486260 DHX57Q6P158 1386 aaKnown RBP24.4■■□□□ 1.5
THBS3-207ENST00000486260 IQGAP3Q86VI3 1631 aa24.4■■□□□ 1.5
THBS3-207ENST00000486260 FAM135AQ9P2D6 1515 aa24.39■■□□□ 1.5
THBS3-207ENST00000486260 VWDEQ8N2E2 1590 aa24.39■■□□□ 1.49
THBS3-207ENST00000486260 WASHC2CQ9Y4E1 1318 aa24.36■■□□□ 1.49
THBS3-207ENST00000486260 CEP152O94986 1710 aa24.34■■□□□ 1.49
THBS3-207ENST00000486260 PPP6R1Q9UPN7 881 aa24.34■■□□□ 1.49
THBS3-207ENST00000486260 PKD2Q13563 968 aa24.33■■□□□ 1.49
THBS3-207ENST00000486260 ABCC3O15438 1527 aa24.33■■□□□ 1.49
THBS3-207ENST00000486260 CCER1Q8TC90 406 aaPredicted RBP24.32■■□□□ 1.48
THBS3-207ENST00000486260 FOXD1Q16676 465 aa24.31■■□□□ 1.48
THBS3-207ENST00000486260 LMTK2Q8IWU2 1503 aa24.31■■□□□ 1.48
THBS3-207ENST00000486260 TET3O43151 1660 aa24.29■■□□□ 1.48
THBS3-207ENST00000486260 ZC3H13Q5T200 1668 aaKnown RBP24.29■■□□□ 1.48
THBS3-207ENST00000486260 ESF1Q9H501 851 aaKnown RBP24.28■■□□□ 1.48
THBS3-207ENST00000486260 CLTCQ00610 1675 aaKnown RBP24.27■■□□□ 1.48
THBS3-207ENST00000486260 EFCAB6Q5THR3 1501 aa24.26■■□□□ 1.47
THBS3-207ENST00000486260 CAMSAP1Q5T5Y3 1602 aa24.25■■□□□ 1.47
THBS3-207ENST00000486260 E9PCH4 1651 aa24.24■■□□□ 1.47
THBS3-207ENST00000486260 FER1L4A9Z1Z3 1794 aa24.21■■□□□ 1.47
THBS3-207ENST00000486260 NPATQ14207 1427 aa24.21■■□□□ 1.47
THBS3-207ENST00000486260 CNTLNQ9NXG0 1405 aa24.2■■□□□ 1.47
THBS3-207ENST00000486260 ADAMTSL3P82987 1691 aa24.2■■□□□ 1.46
THBS3-207ENST00000486260 ARHGAP31Q2M1Z3 1444 aa24.19■■□□□ 1.46
THBS3-207ENST00000486260 MADDQ8WXG6 1647 aa24.19■■□□□ 1.46
THBS3-207ENST00000486260 ZMYM3Q14202 1370 aa24.19■■□□□ 1.46
THBS3-207ENST00000486260 ANKRD30BQ9BXX2 1392 aa24.18■■□□□ 1.46
THBS3-207ENST00000486260 RPRD2Q5VT52 1461 aaKnown RBP24.17■■□□□ 1.46
THBS3-207ENST00000486260 CFAP65Q6ZU64 1925 aaKnown RBP24.16■■□□□ 1.46
THBS3-207ENST00000486260 CLSPNQ9HAW4 1339 aa24.16■■□□□ 1.46
THBS3-207ENST00000486260 MROH2AA6NES4 1674 aa24.15■■□□□ 1.46
THBS3-207ENST00000486260 PLA2R1Q13018 1463 aa24.15■■□□□ 1.46
THBS3-207ENST00000486260 FBXO31Q5XUX0 539 aaPredicted RBP24.14■■□□□ 1.45
THBS3-207ENST00000486260 SIN3AQ96ST3 1273 aa24.14■■□□□ 1.45
THBS3-207ENST00000486260 RIMS1Q86UR5 1692 aaKnown RBP24.13■■□□□ 1.45
THBS3-207ENST00000486260 CEBPAP49715 358 aaPredicted RBP24.12■■□□□ 1.45
THBS3-207ENST00000486260 PTPRTO14522 1441 aa24.12■■□□□ 1.45
THBS3-207ENST00000486260 SPHKAPQ2M3C7 1700 aa24.11■■□□□ 1.45
THBS3-207ENST00000486260 PLPPR3Q6T4P5 718 aa24.1■■□□□ 1.45
THBS3-207ENST00000486260 C3P01024 1663 aa24.1■■□□□ 1.45
THBS3-207ENST00000486260 PREX1Q8TCU6 1659 aa24.1■■□□□ 1.45
THBS3-207ENST00000486260 NOS1P29475 1434 aa24.09■■□□□ 1.45
THBS3-207ENST00000486260 ERVK-7P63135 1459 aa24.09■■□□□ 1.45
THBS3-207ENST00000486260 NEUROD1Q13562 356 aa24.08■■□□□ 1.45
THBS3-207ENST00000486260 TRPM2O94759 1503 aa24.08■■□□□ 1.45
THBS3-207ENST00000486260 SYNMO15061 1565 aa24.05■■□□□ 1.44
THBS3-207ENST00000486260 CCDC144AA2RUR9 1427 aa24.05■■□□□ 1.44
THBS3-207ENST00000486260 SPATA31D1Q6ZQQ2 1576 aa24.04■■□□□ 1.44
THBS3-207ENST00000486260 KDM4FA0A1W2PPD8 638 aa24.04■■□□□ 1.44
THBS3-207ENST00000486260 UGGT1Q9NYU2 1555 aa24.04■■□□□ 1.44
THBS3-207ENST00000486260 CLTCL1P53675 1640 aa24.02■■□□□ 1.44
THBS3-207ENST00000486260 PTPRMP28827 1452 aa24.02■■□□□ 1.44
THBS3-207ENST00000486260 TNRQ92752 1358 aa23.99■■□□□ 1.43
THBS3-207ENST00000486260 IDI1Q13907 227 aa23.98■■□□□ 1.43
THBS3-207ENST00000486260 SLC52A1Q9NWF4 448 aa23.98■■□□□ 1.43
THBS3-207ENST00000486260 PIK3C2BO00750 1634 aa23.97■■□□□ 1.43
THBS3-207ENST00000486260 CHGAP10645 457 aaKnown RBP23.93■■□□□ 1.42
THBS3-207ENST00000486260 RGL3Q3MIN7 710 aa23.91■■□□□ 1.42
THBS3-207ENST00000486260 KIF1BO60333 1816 aa23.91■■□□□ 1.42
THBS3-207ENST00000486260 TONSLQ96HA7 1378 aa23.91■■□□□ 1.42
THBS3-207ENST00000486260 SPATA31E1Q6ZUB1 1445 aa23.9■■□□□ 1.42
THBS3-207ENST00000486260 NLRP1Q9C000 1473 aa23.87■■□□□ 1.41
THBS3-207ENST00000486260 L3MBTL2Q969R5 705 aa23.87■■□□□ 1.41
THBS3-207ENST00000486260 ADGRB3O60242 1522 aa23.87■■□□□ 1.41
THBS3-207ENST00000486260 STAG3Q9UJ98 1225 aa23.86■■□□□ 1.41
THBS3-207ENST00000486260 TMEM131LA2VDJ0 1609 aa23.86■■□□□ 1.41
THBS3-207ENST00000486260 MYO3AQ8NEV4 1616 aa23.86■■□□□ 1.41
THBS3-207ENST00000486260 TIMELESSQ9UNS1 1208 aa23.86■■□□□ 1.41
THBS3-207ENST00000486260 SETD1BQ9UPS6 1966 aaKnown RBP23.84■■□□□ 1.41
THBS3-207ENST00000486260 ZEB1P37275 1124 aaPredicted RBP23.84■■□□□ 1.41
THBS3-207ENST00000486260 NEURL4Q96JN8 1562 aa23.84■■□□□ 1.41
THBS3-207ENST00000486260 ZNF326Q5BKZ1 582 aaKnown RBP23.83■■□□□ 1.41
THBS3-207ENST00000486260 MYO5BQ9ULV0 1848 aa23.83■■□□□ 1.41
THBS3-207ENST00000486260 A2ML1A8K2U0 1454 aa23.81■■□□□ 1.4
THBS3-207ENST00000486260 DCAF11Q8TEB1 546 aa23.8■■□□□ 1.4
THBS3-207ENST00000486260 UBR1Q8IWV7 1749 aa23.8■■□□□ 1.4
THBS3-207ENST00000486260 KDM2AQ9Y2K7 1162 aa23.79■■□□□ 1.4
THBS3-207ENST00000486260 CEP170BQ9Y4F5 1589 aaPredicted RBP23.78■■□□□ 1.4
THBS3-207ENST00000486260 KDM5AP29375 1690 aaKnown RBP23.77■■□□□ 1.4
THBS3-207ENST00000486260 UHRF1BP1Q6BDS2 1440 aa23.77■■□□□ 1.4
THBS3-207ENST00000486260 PPP1R15AO75807 674 aaPredicted RBP23.75■■□□□ 1.39
THBS3-207ENST00000486260 RPGRIP1LQ68CZ1 1315 aa23.75■■□□□ 1.39
THBS3-207ENST00000486260 ZNF142P52746 1687 aaPredicted RBP23.75■■□□□ 1.39
THBS3-207ENST00000486260 NUTM2DQ5VT03 806 aaPredicted RBP23.73■■□□□ 1.39
THBS3-207ENST00000486260 THEMISQ8N1K5 641 aaPredicted RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms