RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 MBD5Q9P267 1494 aa20.18■□□□□ 0.82
SSR4-211ENST00000486204 ARHGEF5Q12774 1597 aa20.17■□□□□ 0.82
SSR4-211ENST00000486204 ZNF777Q9ULD5 760 aaPredicted RBP20.17■□□□□ 0.82
SSR4-211ENST00000486204 ZNF644Q9H582 1327 aaPredicted RBP20.17■□□□□ 0.82
SSR4-211ENST00000486204 MIA2Q96PC5 1412 aa20.17■□□□□ 0.82
SSR4-211ENST00000486204 CPS1P31327 1500 aa20.17■□□□□ 0.82
SSR4-211ENST00000486204 CROCC2H7BZ55 1655 aa20.16■□□□□ 0.82
SSR4-211ENST00000486204 GGT6Q6P531 493 aa20.16■□□□□ 0.82
SSR4-211ENST00000486204 SPAG9O60271 1321 aaKnown RBP20.16■□□□□ 0.82
SSR4-211ENST00000486204 CLTCQ00610 1675 aaKnown RBP20.16■□□□□ 0.82
SSR4-211ENST00000486204 SHANK2Q9UPX8 1470 aa20.14■□□□□ 0.81
SSR4-211ENST00000486204 ATP7AQ04656 1500 aa20.13■□□□□ 0.81
SSR4-211ENST00000486204 ADGBQ8N7X0 1667 aa20.13■□□□□ 0.81
SSR4-211ENST00000486204 A2ML1A8K2U0 1454 aa20.11■□□□□ 0.81
SSR4-211ENST00000486204 FGD6Q6ZV73 1430 aa20.11■□□□□ 0.81
SSR4-211ENST00000486204 HNRNPMP52272 730 aaKnown RBP eCLIP20.11■□□□□ 0.81
SSR4-211ENST00000486204 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
SSR4-211ENST00000486204 CCDC141Q6ZP82 1450 aa20.1■□□□□ 0.81
SSR4-211ENST00000486204 DNMT1P26358 1616 aaKnown RBP20.09■□□□□ 0.81
SSR4-211ENST00000486204 MAST1Q9Y2H9 1570 aa20.08■□□□□ 0.81
SSR4-211ENST00000486204 A2MP01023 1474 aa20.08■□□□□ 0.81
SSR4-211ENST00000486204 ANKLE2Q86XL3 938 aa20.06■□□□□ 0.8
SSR4-211ENST00000486204 RGS17Q9UGC6 210 aaPredicted RBP20.06■□□□□ 0.8
SSR4-211ENST00000486204 PLXNC1O60486 1568 aa20.05■□□□□ 0.8
SSR4-211ENST00000486204 ALKQ9UM73 1620 aa20.04■□□□□ 0.8
SSR4-211ENST00000486204 NEURL4Q96JN8 1562 aa20.04■□□□□ 0.8
SSR4-211ENST00000486204 RTEL1-TNFRSF6BF6WH68 1400 aa20.02■□□□□ 0.79
SSR4-211ENST00000486204 FBXO31Q5XUX0 539 aaPredicted RBP20.01■□□□□ 0.79
SSR4-211ENST00000486204 POLR1AO95602 1720 aaPredicted RBP20.01■□□□□ 0.79
SSR4-211ENST00000486204 VWDEQ8N2E2 1590 aa20■□□□□ 0.79
SSR4-211ENST00000486204 TNRQ92752 1358 aa20■□□□□ 0.79
SSR4-211ENST00000486204 PPARGC1BQ86YN6 1023 aaKnown RBP20■□□□□ 0.79
SSR4-211ENST00000486204 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.99■□□□□ 0.79
SSR4-211ENST00000486204 THEMISQ8N1K5 641 aaPredicted RBP19.99■□□□□ 0.79
SSR4-211ENST00000486204 ABCC5O15440 1437 aa19.97■□□□□ 0.79
SSR4-211ENST00000486204 NPHP4O75161 1426 aaPredicted RBP19.97■□□□□ 0.79
SSR4-211ENST00000486204 DAPK1P53355 1430 aa19.97■□□□□ 0.79
SSR4-211ENST00000486204 RSPH4AQ5TD94 716 aa19.97■□□□□ 0.79
SSR4-211ENST00000486204 MED14O60244 1454 aa19.93■□□□□ 0.78
SSR4-211ENST00000486204 LRRC7Q96NW7 1537 aa19.92■□□□□ 0.78
SSR4-211ENST00000486204 EIF2AK4Q9P2K8 1649 aaKnown RBP19.91■□□□□ 0.78
SSR4-211ENST00000486204 POTEAQ6S8J7 498 aa19.91■□□□□ 0.78
SSR4-211ENST00000486204 RRBP1Q9P2E9 1410 aaKnown RBP19.91■□□□□ 0.78
SSR4-211ENST00000486204 PZPP20742 1482 aa19.9■□□□□ 0.78
SSR4-211ENST00000486204 KIF3BO15066 747 aa19.89■□□□□ 0.77
SSR4-211ENST00000486204 DHX29Q7Z478 1369 aaKnown RBP19.89■□□□□ 0.77
SSR4-211ENST00000486204 FAM135AQ9P2D6 1515 aa19.89■□□□□ 0.77
SSR4-211ENST00000486204 UGGT1Q9NYU2 1555 aa19.88■□□□□ 0.77
SSR4-211ENST00000486204 ADGRL2O95490 1459 aa19.88■□□□□ 0.77
SSR4-211ENST00000486204 WASHC2CQ9Y4E1 1318 aa19.88■□□□□ 0.77
SSR4-211ENST00000486204 DEPDC5O75140 1603 aa19.87■□□□□ 0.77
SSR4-211ENST00000486204 RNF17Q9BXT8 1623 aaKnown RBP19.87■□□□□ 0.77
SSR4-211ENST00000486204 TSPY4P0CV99 314 aa19.87■□□□□ 0.77
SSR4-211ENST00000486204 TSPY10P0CW01 314 aa19.87■□□□□ 0.77
SSR4-211ENST00000486204 NLRP1Q9C000 1473 aa19.86■□□□□ 0.77
SSR4-211ENST00000486204 DUOX2Q9NRD8 1548 aa19.86■□□□□ 0.77
SSR4-211ENST00000486204 FAM50AQ14320 339 aaKnown RBP19.85■□□□□ 0.77
SSR4-211ENST00000486204 STRCP1A6NGW2 1772 aa19.85■□□□□ 0.77
SSR4-211ENST00000486204 IQGAP1P46940 1657 aa19.84■□□□□ 0.77
SSR4-211ENST00000486204 MROH1Q8NDA8 1641 aa19.84■□□□□ 0.77
SSR4-211ENST00000486204 KDM5DQ9BY66 1539 aa19.82■□□□□ 0.76
SSR4-211ENST00000486204 SYNMO15061 1565 aa19.82■□□□□ 0.76
SSR4-211ENST00000486204 KIF15Q9NS87 1388 aa19.8■□□□□ 0.76
SSR4-211ENST00000486204 CEP152O94986 1710 aa19.79■□□□□ 0.76
SSR4-211ENST00000486204 ZC3H13Q5T200 1668 aaKnown RBP19.78■□□□□ 0.76
SSR4-211ENST00000486204 ERBINQ96RT1 1412 aa19.78■□□□□ 0.76
SSR4-211ENST00000486204 ANKRD30AQ9BXX3 1397 aa19.78■□□□□ 0.76
SSR4-211ENST00000486204 GCC2Q8IWJ2 1684 aa19.77■□□□□ 0.76
SSR4-211ENST00000486204 FAM135BQ49AJ0 1406 aa19.76■□□□□ 0.75
SSR4-211ENST00000486204 PRDM15P57071 1507 aaPredicted RBP19.76■□□□□ 0.75
SSR4-211ENST00000486204 CHIC2Q9UKJ5 165 aa19.75■□□□□ 0.75
SSR4-211ENST00000486204 ROCK1Q13464 1354 aa19.74■□□□□ 0.75
SSR4-211ENST00000486204 RRP7BPQ9NSQ0 103 aa19.72■□□□□ 0.75
SSR4-211ENST00000486204 UNC13BO14795 1591 aa19.71■□□□□ 0.75
SSR4-211ENST00000486204 TXNDC2Q86VQ3 553 aa19.7■□□□□ 0.74
SSR4-211ENST00000486204 LTKP29376 864 aa19.69■□□□□ 0.74
SSR4-211ENST00000486204 ABCC3O15438 1527 aa19.69■□□□□ 0.74
SSR4-211ENST00000486204 SETD1AO15047 1707 aaKnown RBP19.68■□□□□ 0.74
SSR4-211ENST00000486204 SCAF11Q99590 1463 aaKnown RBP19.68■□□□□ 0.74
SSR4-211ENST00000486204 UPF1Q92900 1129 aaKnown RBP eCLIP19.67■□□□□ 0.74
SSR4-211ENST00000486204 ANKRD50Q9ULJ7 1429 aa19.67■□□□□ 0.74
SSR4-211ENST00000486204 CFAP65Q6ZU64 1925 aaKnown RBP19.66■□□□□ 0.74
SSR4-211ENST00000486204 ITGAEP38570 1179 aa19.66■□□□□ 0.74
SSR4-211ENST00000486204 XIRP1Q702N8 1843 aaKnown RBP19.65■□□□□ 0.74
SSR4-211ENST00000486204 ERVK-7P63135 1459 aa19.64■□□□□ 0.73
SSR4-211ENST00000486204 TMEM94Q12767 1356 aa19.63■□□□□ 0.73
SSR4-211ENST00000486204 EID1Q9Y6B2 187 aa19.63■□□□□ 0.73
SSR4-211ENST00000486204 IQGAP3Q86VI3 1631 aa19.62■□□□□ 0.73
SSR4-211ENST00000486204 LMTK2Q8IWU2 1503 aa19.61■□□□□ 0.73
SSR4-211ENST00000486204 NAIPQ13075 1403 aa19.61■□□□□ 0.73
SSR4-211ENST00000486204 ARHGAP23Q9P227 1491 aa19.6■□□□□ 0.73
SSR4-211ENST00000486204 UBR1Q8IWV7 1749 aa19.6■□□□□ 0.73
SSR4-211ENST00000486204 TET3O43151 1660 aa19.6■□□□□ 0.73
SSR4-211ENST00000486204 ROBO1Q9Y6N7 1651 aa19.6■□□□□ 0.73
SSR4-211ENST00000486204 HFM1A2PYH4 1435 aa19.59■□□□□ 0.73
SSR4-211ENST00000486204 PROSER2Q86WR7 435 aaPredicted RBP19.59■□□□□ 0.73
SSR4-211ENST00000486204 RBM33Q96EV2 1170 aaKnown RBP19.59■□□□□ 0.73
SSR4-211ENST00000486204 JCADQ9P266 1359 aa19.58■□□□□ 0.73
SSR4-211ENST00000486204 SLIT1O75093 1534 aa19.58■□□□□ 0.73
SSR4-211ENST00000486204 EFCAB6Q5THR3 1501 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms