RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 LMTK3Q96Q04 1460 aa16.85■□□□□ 0.29
SND1-212ENST00000485871 DHX29Q7Z478 1369 aaKnown RBP16.84■□□□□ 0.29
SND1-212ENST00000485871 MROH1Q8NDA8 1641 aa16.83■□□□□ 0.28
SND1-212ENST00000485871 RNF17Q9BXT8 1623 aaKnown RBP16.83■□□□□ 0.28
SND1-212ENST00000485871 SIGLEC1Q9BZZ2 1709 aa16.83■□□□□ 0.28
SND1-212ENST00000485871 PTPRMP28827 1452 aa16.82■□□□□ 0.28
SND1-212ENST00000485871 PZPP20742 1482 aa16.81■□□□□ 0.28
SND1-212ENST00000485871 IQGAP3Q86VI3 1631 aa16.81■□□□□ 0.28
SND1-212ENST00000485871 ARID4BQ4LE39 1312 aaPredicted RBP16.8■□□□□ 0.28
SND1-212ENST00000485871 ACIN1Q9UKV3 1341 aaKnown RBP16.8■□□□□ 0.28
SND1-212ENST00000485871 VWDEQ8N2E2 1590 aa16.8■□□□□ 0.28
SND1-212ENST00000485871 ZEB1P37275 1124 aaPredicted RBP16.79■□□□□ 0.28
SND1-212ENST00000485871 PRDM15P57071 1507 aaPredicted RBP16.79■□□□□ 0.28
SND1-212ENST00000485871 ATP10AO60312 1499 aa16.79■□□□□ 0.28
SND1-212ENST00000485871 AGLP35573 1532 aa16.77■□□□□ 0.28
SND1-212ENST00000485871 MYT1LQ9UL68 1186 aa16.76■□□□□ 0.27
SND1-212ENST00000485871 FAM135AQ9P2D6 1515 aa16.75■□□□□ 0.27
SND1-212ENST00000485871 ADAMTSL3P82987 1691 aa16.72■□□□□ 0.27
SND1-212ENST00000485871 TRIM52Q96A61 297 aa16.72■□□□□ 0.27
SND1-212ENST00000485871 CEP152O94986 1710 aa16.72■□□□□ 0.27
SND1-212ENST00000485871 NUP155O75694 1391 aa16.72■□□□□ 0.27
SND1-212ENST00000485871 TET3O43151 1660 aa16.72■□□□□ 0.27
SND1-212ENST00000485871 CLSPNQ9HAW4 1339 aa16.71■□□□□ 0.27
SND1-212ENST00000485871 PLPPR3Q6T4P5 718 aa16.71■□□□□ 0.27
SND1-212ENST00000485871 CCER1Q8TC90 406 aaPredicted RBP16.71■□□□□ 0.27
SND1-212ENST00000485871 CERKQ8TCT0 537 aa16.71■□□□□ 0.27
SND1-212ENST00000485871 MPHOSPH9Q99550 1183 aa16.71■□□□□ 0.27
SND1-212ENST00000485871 LMTK2Q8IWU2 1503 aa16.7■□□□□ 0.26
SND1-212ENST00000485871 KIF3BO15066 747 aa16.7■□□□□ 0.26
SND1-212ENST00000485871 HSPA2P54652 639 aa16.7■□□□□ 0.26
SND1-212ENST00000485871 E9PCH4 1651 aa16.69■□□□□ 0.26
SND1-212ENST00000485871 ZC3H13Q5T200 1668 aaKnown RBP16.69■□□□□ 0.26
SND1-212ENST00000485871 DISP3Q9P2K9 1392 aa16.68■□□□□ 0.26
SND1-212ENST00000485871 SOCS7O14512 581 aa16.68■□□□□ 0.26
SND1-212ENST00000485871 ABCC3O15438 1527 aa16.66■□□□□ 0.26
SND1-212ENST00000485871 ILDR2Q71H61 639 aa16.66■□□□□ 0.26
SND1-212ENST00000485871 SLC4A1APQ9BWU0 796 aaKnown RBP16.65■□□□□ 0.26
SND1-212ENST00000485871 CAMSAP1Q5T5Y3 1602 aa16.65■□□□□ 0.26
SND1-212ENST00000485871 EFCAB6Q5THR3 1501 aa16.65■□□□□ 0.26
SND1-212ENST00000485871 MADDQ8WXG6 1647 aa16.64■□□□□ 0.25
SND1-212ENST00000485871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.63■□□□□ 0.25
SND1-212ENST00000485871 ANKRD30BQ9BXX2 1392 aa16.63■□□□□ 0.25
SND1-212ENST00000485871 KANK1Q14678 1352 aa16.62■□□□□ 0.25
SND1-212ENST00000485871 SPHKAPQ2M3C7 1700 aa16.62■□□□□ 0.25
SND1-212ENST00000485871 PKD2Q13563 968 aa16.61■□□□□ 0.25
SND1-212ENST00000485871 FOXD1Q16676 465 aa16.6■□□□□ 0.25
SND1-212ENST00000485871 PLA2R1Q13018 1463 aa16.6■□□□□ 0.25
SND1-212ENST00000485871 CLTCQ00610 1675 aaKnown RBP16.59■□□□□ 0.25
SND1-212ENST00000485871 GGT6Q6P531 493 aa16.59■□□□□ 0.25
SND1-212ENST00000485871 RIMS1Q86UR5 1692 aaKnown RBP16.57■□□□□ 0.24
SND1-212ENST00000485871 RPRD2Q5VT52 1461 aaKnown RBP16.57■□□□□ 0.24
SND1-212ENST00000485871 ARHGAP31Q2M1Z3 1444 aa16.57■□□□□ 0.24
SND1-212ENST00000485871 PTPRTO14522 1441 aa16.56■□□□□ 0.24
SND1-212ENST00000485871 NPATQ14207 1427 aa16.56■□□□□ 0.24
SND1-212ENST00000485871 PPP6R1Q9UPN7 881 aa16.56■□□□□ 0.24
SND1-212ENST00000485871 MROH2AA6NES4 1674 aa16.56■□□□□ 0.24
SND1-212ENST00000485871 TRPM2O94759 1503 aa16.55■□□□□ 0.24
SND1-212ENST00000485871 MLECQ14165 292 aa16.55■□□□□ 0.24
SND1-212ENST00000485871 SIN3AQ96ST3 1273 aa16.55■□□□□ 0.24
SND1-212ENST00000485871 CFAP65Q6ZU64 1925 aaKnown RBP16.55■□□□□ 0.24
SND1-212ENST00000485871 FER1L4A9Z1Z3 1794 aa16.54■□□□□ 0.24
SND1-212ENST00000485871 PREX1Q8TCU6 1659 aa16.53■□□□□ 0.24
SND1-212ENST00000485871 WASHC2CQ9Y4E1 1318 aa16.52■□□□□ 0.24
SND1-212ENST00000485871 CLTCL1P53675 1640 aa16.52■□□□□ 0.23
SND1-212ENST00000485871 NOS1P29475 1434 aa16.51■□□□□ 0.23
SND1-212ENST00000485871 SYNMO15061 1565 aa16.51■□□□□ 0.23
SND1-212ENST00000485871 PIK3C2BO00750 1634 aa16.5■□□□□ 0.23
SND1-212ENST00000485871 DMRT2Q9Y5R5 561 aa16.5■□□□□ 0.23
SND1-212ENST00000485871 SPATA31D1Q6ZQQ2 1576 aa16.47■□□□□ 0.23
SND1-212ENST00000485871 UGGT1Q9NYU2 1555 aa16.47■□□□□ 0.23
SND1-212ENST00000485871 C3P01024 1663 aa16.47■□□□□ 0.23
SND1-212ENST00000485871 CNTLNQ9NXG0 1405 aa16.47■□□□□ 0.23
SND1-212ENST00000485871 NEURL4Q96JN8 1562 aa16.47■□□□□ 0.23
SND1-212ENST00000485871 KIF1BO60333 1816 aa16.46■□□□□ 0.23
SND1-212ENST00000485871 ERVK-7P63135 1459 aa16.46■□□□□ 0.23
SND1-212ENST00000485871 CCDC144AA2RUR9 1427 aa16.45■□□□□ 0.22
SND1-212ENST00000485871 NEUROD1Q13562 356 aa16.45■□□□□ 0.22
SND1-212ENST00000485871 TIMELESSQ9UNS1 1208 aa16.44■□□□□ 0.22
SND1-212ENST00000485871 ZMYM3Q14202 1370 aa16.43■□□□□ 0.22
SND1-212ENST00000485871 SPATA31E1Q6ZUB1 1445 aa16.43■□□□□ 0.22
SND1-212ENST00000485871 ADGRB3O60242 1522 aa16.41■□□□□ 0.22
SND1-212ENST00000485871 CEBPAP49715 358 aaPredicted RBP16.41■□□□□ 0.22
SND1-212ENST00000485871 IFT172Q9UG01 1749 aa16.41■□□□□ 0.22
SND1-212ENST00000485871 TONSLQ96HA7 1378 aa16.4■□□□□ 0.22
SND1-212ENST00000485871 MYO5BQ9ULV0 1848 aa16.4■□□□□ 0.22
SND1-212ENST00000485871 FBXO31Q5XUX0 539 aaPredicted RBP16.38■□□□□ 0.21
SND1-212ENST00000485871 TMEM131LA2VDJ0 1609 aa16.37■□□□□ 0.21
SND1-212ENST00000485871 L3MBTL2Q969R5 705 aa16.37■□□□□ 0.21
SND1-212ENST00000485871 KDM5AP29375 1690 aaKnown RBP16.35■□□□□ 0.21
SND1-212ENST00000485871 PPP1R15AO75807 674 aaPredicted RBP16.35■□□□□ 0.21
SND1-212ENST00000485871 ESF1Q9H501 851 aaKnown RBP16.35■□□□□ 0.21
SND1-212ENST00000485871 PPLO60437 1756 aa16.35■□□□□ 0.21
SND1-212ENST00000485871 UHRF1BP1Q6BDS2 1440 aa16.35■□□□□ 0.21
SND1-212ENST00000485871 IDI1Q13907 227 aa16.32■□□□□ 0.2
SND1-212ENST00000485871 SLC52A1Q9NWF4 448 aa16.32■□□□□ 0.2
SND1-212ENST00000485871 UBR1Q8IWV7 1749 aa16.31■□□□□ 0.2
SND1-212ENST00000485871 MYO3AQ8NEV4 1616 aa16.31■□□□□ 0.2
SND1-212ENST00000485871 TNRQ92752 1358 aa16.31■□□□□ 0.2
SND1-212ENST00000485871 NEXMIFQ5QGS0 1516 aa16.3■□□□□ 0.2
SND1-212ENST00000485871 STRCQ7RTU9 1775 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms