RNA–Protein interactions for RNA: ENST00000485373.5

RTCB-204, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, human

TSL 4

Gene RTCB, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTCB-204	ENST00000485373	ROCK1	Q13464	1354 aa		13.84	□□□□□ -0.19
RTCB-204	ENST00000485373	RNF17	Q9BXT8	1623 aa	Known RBP	13.84	□□□□□ -0.19
RTCB-204	ENST00000485373	CLTC	Q00610	1675 aa	Known RBP	13.84	□□□□□ -0.19
RTCB-204	ENST00000485373	CNTLN	Q9NXG0	1405 aa		13.82	□□□□□ -0.2
RTCB-204	ENST00000485373	ANKRD50	Q9ULJ7	1429 aa		13.82	□□□□□ -0.2
RTCB-204	ENST00000485373	MROH2A	A6NES4	1674 aa		13.81	□□□□□ -0.2
RTCB-204	ENST00000485373	KDM5D	Q9BY66	1539 aa		13.8	□□□□□ -0.2
RTCB-204	ENST00000485373	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.8	□□□□□ -0.2	7e-9	■□□□□ 8.1
RTCB-204	ENST00000485373	PPP6R1	Q9UPN7	881 aa		13.8	□□□□□ -0.2
RTCB-204	ENST00000485373	C3	P01024	1663 aa		13.79	□□□□□ -0.2
RTCB-204	ENST00000485373	CEP152	O94986	1710 aa		13.79	□□□□□ -0.2
RTCB-204	ENST00000485373	WASHC2C	Q9Y4E1	1318 aa		13.79	□□□□□ -0.2
RTCB-204	ENST00000485373	KANK1	Q14678	1352 aa		13.79	□□□□□ -0.2
RTCB-204	ENST00000485373	FAM135A	Q9P2D6	1515 aa		13.79	□□□□□ -0.2
RTCB-204	ENST00000485373	MROH1	Q8NDA8	1641 aa		13.79	□□□□□ -0.2
RTCB-204	ENST00000485373	GCC2	Q8IWJ2	1684 aa		13.79	□□□□□ -0.2
RTCB-204	ENST00000485373	CEBPA	P49715	358 aa	Predicted RBP	13.78	□□□□□ -0.2
RTCB-204	ENST00000485373	PRDM15	P57071	1507 aa	Predicted RBP	13.78	□□□□□ -0.2
RTCB-204	ENST00000485373	DEPDC5	O75140	1603 aa		13.78	□□□□□ -0.2
RTCB-204	ENST00000485373	ZC3H13	Q5T200	1668 aa	Known RBP	13.78	□□□□□ -0.2
RTCB-204	ENST00000485373	ABCC3	O15438	1527 aa		13.76	□□□□□ -0.21
RTCB-204	ENST00000485373	ZMYM3	Q14202	1370 aa		13.76	□□□□□ -0.21
RTCB-204	ENST00000485373	CFAP65	Q6ZU64	1925 aa	Known RBP	13.74	□□□□□ -0.21
RTCB-204	ENST00000485373	HFM1	A2PYH4	1435 aa		13.74	□□□□□ -0.21
RTCB-204	ENST00000485373	NAIP	Q13075	1403 aa		13.74	□□□□□ -0.21
RTCB-204	ENST00000485373	CAMSAP1	Q5T5Y3	1602 aa		13.74	□□□□□ -0.21
RTCB-204	ENST00000485373	SETD1B	Q9UPS6	1966 aa	Known RBP	13.74	□□□□□ -0.21
RTCB-204	ENST00000485373	UNC13B	O14795	1591 aa		13.74	□□□□□ -0.21
RTCB-204	ENST00000485373	PZP	P20742	1482 aa		13.71	□□□□□ -0.21
RTCB-204	ENST00000485373	VWDE	Q8N2E2	1590 aa		13.71	□□□□□ -0.22
RTCB-204	ENST00000485373	PREX1	Q8TCU6	1659 aa		13.7	□□□□□ -0.22
RTCB-204	ENST00000485373	NUP155	O75694	1391 aa		13.7	□□□□□ -0.22
RTCB-204	ENST00000485373	NPAT	Q14207	1427 aa		13.69	□□□□□ -0.22
RTCB-204	ENST00000485373	LMTK2	Q8IWU2	1503 aa		13.69	□□□□□ -0.22
RTCB-204	ENST00000485373	TET3	O43151	1660 aa		13.69	□□□□□ -0.22
RTCB-204	ENST00000485373	IQGAP3	Q86VI3	1631 aa		13.68	□□□□□ -0.22
RTCB-204	ENST00000485373	UHRF1BP1	Q6BDS2	1440 aa		13.68	□□□□□ -0.22
RTCB-204	ENST00000485373	TRIM52	Q96A61	297 aa		13.68	□□□□□ -0.22
RTCB-204	ENST00000485373	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.67	□□□□□ -0.22
RTCB-204	ENST00000485373	EFCAB6	Q5THR3	1501 aa		13.67	□□□□□ -0.22
RTCB-204	ENST00000485373	TNR	Q92752	1358 aa		13.67	□□□□□ -0.22
RTCB-204	ENST00000485373	SETD5	Q9C0A6	1442 aa		13.66	□□□□□ -0.22
RTCB-204	ENST00000485373	MYO3A	Q8NEV4	1616 aa		13.66	□□□□□ -0.22
RTCB-204	ENST00000485373	ERVK-7	P63135	1459 aa		13.66	□□□□□ -0.22
RTCB-204	ENST00000485373	ARHGAP31	Q2M1Z3	1444 aa		13.65	□□□□□ -0.22
RTCB-204	ENST00000485373	SPATA31D1	Q6ZQQ2	1576 aa		13.64	□□□□□ -0.23
RTCB-204	ENST00000485373	LMTK3	Q96Q04	1460 aa		13.64	□□□□□ -0.23
RTCB-204	ENST00000485373		E9PCH4	1651 aa		13.63	□□□□□ -0.23
RTCB-204	ENST00000485373	RAB3GAP2	Q9H2M9	1393 aa		13.62	□□□□□ -0.23
RTCB-204	ENST00000485373	ZNF142	P52746	1687 aa	Predicted RBP	13.62	□□□□□ -0.23
RTCB-204	ENST00000485373	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.62	□□□□□ -0.23
RTCB-204	ENST00000485373	RPRD2	Q5VT52	1461 aa	Known RBP	13.61	□□□□□ -0.23
RTCB-204	ENST00000485373	HSPA2	P54652	639 aa		13.61	□□□□□ -0.23
RTCB-204	ENST00000485373	TRIM26	Q12899	539 aa	Predicted RBP	13.61	□□□□□ -0.23
RTCB-204	ENST00000485373	A2ML1	A8K2U0	1454 aa		13.6	□□□□□ -0.23
RTCB-204	ENST00000485373	NLRP1	Q9C000	1473 aa		13.6	□□□□□ -0.23
RTCB-204	ENST00000485373	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.59	□□□□□ -0.23
RTCB-204	ENST00000485373	ACIN1	Q9UKV3	1341 aa	Known RBP	13.59	□□□□□ -0.23
RTCB-204	ENST00000485373	SYNM	O15061	1565 aa		13.58	□□□□□ -0.24
RTCB-204	ENST00000485373	NOS1	P29475	1434 aa		13.57	□□□□□ -0.24
RTCB-204	ENST00000485373	SPHKAP	Q2M3C7	1700 aa		13.57	□□□□□ -0.24
RTCB-204	ENST00000485373	PKD2	Q13563	968 aa		13.56	□□□□□ -0.24
RTCB-204	ENST00000485373	STAG3	Q9UJ98	1225 aa		13.56	□□□□□ -0.24
RTCB-204	ENST00000485373	UGGT1	Q9NYU2	1555 aa		13.56	□□□□□ -0.24
RTCB-204	ENST00000485373	PIK3C2B	O00750	1634 aa		13.55	□□□□□ -0.24
RTCB-204	ENST00000485373	UBR1	Q8IWV7	1749 aa		13.53	□□□□□ -0.24
RTCB-204	ENST00000485373	MPHOSPH9	Q99550	1183 aa		13.53	□□□□□ -0.24
RTCB-204	ENST00000485373	SLC52A1	Q9NWF4	448 aa		13.53	□□□□□ -0.24
RTCB-204	ENST00000485373	CHGA	P10645	457 aa	Known RBP	13.52	□□□□□ -0.25
RTCB-204	ENST00000485373	IDI1	Q13907	227 aa		13.52	□□□□□ -0.25
RTCB-204	ENST00000485373	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.52	□□□□□ -0.25
RTCB-204	ENST00000485373	ADGRB3	O60242	1522 aa		13.51	□□□□□ -0.25
RTCB-204	ENST00000485373	HRC	P23327	699 aa		13.51	□□□□□ -0.25
RTCB-204	ENST00000485373	FOXD1	Q16676	465 aa		13.51	□□□□□ -0.25
RTCB-204	ENST00000485373	MYO5B	Q9ULV0	1848 aa		13.5	□□□□□ -0.25
RTCB-204	ENST00000485373	TRPM2	O94759	1503 aa		13.5	□□□□□ -0.25
RTCB-204	ENST00000485373	PLA2R1	Q13018	1463 aa		13.5	□□□□□ -0.25
RTCB-204	ENST00000485373	STRC	Q7RTU9	1775 aa		13.5	□□□□□ -0.25
RTCB-204	ENST00000485373	PTPRT	O14522	1441 aa		13.49	□□□□□ -0.25
RTCB-204	ENST00000485373	POLR1A	O95602	1720 aa	Predicted RBP	13.49	□□□□□ -0.25
RTCB-204	ENST00000485373	KDM5A	P29375	1690 aa	Known RBP	13.49	□□□□□ -0.25
RTCB-204	ENST00000485373	CLTCL1	P53675	1640 aa		13.49	□□□□□ -0.25
RTCB-204	ENST00000485373	KIF1B	O60333	1816 aa		13.48	□□□□□ -0.25
RTCB-204	ENST00000485373	NCKAP5L	Q9HCH0	1330 aa		13.47	□□□□□ -0.25
RTCB-204	ENST00000485373	TMEM131L	A2VDJ0	1609 aa		13.46	□□□□□ -0.25
RTCB-204	ENST00000485373	ANKLE2	Q86XL3	938 aa		13.46	□□□□□ -0.25
RTCB-204	ENST00000485373	CCDC144A	A2RUR9	1427 aa		13.45	□□□□□ -0.26
RTCB-204	ENST00000485373	SLIT1	O75093	1534 aa		13.44	□□□□□ -0.26
RTCB-204	ENST00000485373	ZNF326	Q5BKZ1	582 aa	Known RBP	13.44	□□□□□ -0.26
RTCB-204	ENST00000485373	PCGF6	Q9BYE7	350 aa		13.44	□□□□□ -0.26
RTCB-204	ENST00000485373	DMRT2	Q9Y5R5	561 aa		13.44	□□□□□ -0.26
RTCB-204	ENST00000485373	EID1	Q9Y6B2	187 aa		13.44	□□□□□ -0.26
RTCB-204	ENST00000485373	TMEM2	Q9UHN6	1383 aa		13.44	□□□□□ -0.26
RTCB-204	ENST00000485373	SCAF11	Q99590	1463 aa	Known RBP	13.43	□□□□□ -0.26
RTCB-204	ENST00000485373	ARHGAP23	Q9P227	1491 aa		13.43	□□□□□ -0.26
RTCB-204	ENST00000485373	TXNDC2	Q86VQ3	553 aa		13.43	□□□□□ -0.26
RTCB-204	ENST00000485373	NEURL4	Q96JN8	1562 aa		13.42	□□□□□ -0.26
RTCB-204	ENST00000485373	RIMS2	Q9UQ26	1411 aa		13.42	□□□□□ -0.26
RTCB-204	ENST00000485373	PPP1R15A	O75807	674 aa	Predicted RBP	13.42	□□□□□ -0.26
RTCB-204	ENST00000485373	IQGAP1	P46940	1657 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms