RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 UGGT1Q9NYU2 1555 aa17.34■□□□□ 0.37
EXOSC1-210ENST00000485122 ATP7AQ04656 1500 aa17.31■□□□□ 0.36
EXOSC1-210ENST00000485122 A2MP01023 1474 aa17.31■□□□□ 0.36
EXOSC1-210ENST00000485122 TROQ12816 1431 aaPredicted RBP17.31■□□□□ 0.36
EXOSC1-210ENST00000485122 INO80Q9ULG1 1556 aaPredicted RBP17.3■□□□□ 0.36
EXOSC1-210ENST00000485122 FAM135AQ9P2D6 1515 aa17.3■□□□□ 0.36
EXOSC1-210ENST00000485122 SYCP2Q9BX26 1530 aa17.29■□□□□ 0.36
EXOSC1-210ENST00000485122 JCADQ9P266 1359 aa17.28■□□□□ 0.36
EXOSC1-210ENST00000485122 ZNF772Q68DY9 489 aaPredicted RBP17.28■□□□□ 0.36
EXOSC1-210ENST00000485122 ATP1B4Q9UN42 357 aaPredicted RBP17.28■□□□□ 0.36
EXOSC1-210ENST00000485122 CDC42BPAQ5VT25 1732 aa17.27■□□□□ 0.36
EXOSC1-210ENST00000485122 LRRIQ1Q96JM4 1722 aa17.27■□□□□ 0.36
EXOSC1-210ENST00000485122 CDK12Q9NYV4 1490 aaPredicted RBP17.27■□□□□ 0.36
EXOSC1-210ENST00000485122 THEMISQ8N1K5 641 aaPredicted RBP17.27■□□□□ 0.36
EXOSC1-210ENST00000485122 PZPP20742 1482 aa17.26■□□□□ 0.35
EXOSC1-210ENST00000485122 RXRBP28702 533 aa17.26■□□□□ 0.35
EXOSC1-210ENST00000485122 COL16A1Q07092 1604 aaPredicted RBP17.25■□□□□ 0.35
EXOSC1-210ENST00000485122 SPAG9O60271 1321 aaKnown RBP17.25■□□□□ 0.35
EXOSC1-210ENST00000485122 RGS12O14924 1447 aa17.25■□□□□ 0.35
EXOSC1-210ENST00000485122 CLIP1P30622 1438 aa17.25■□□□□ 0.35
EXOSC1-210ENST00000485122 MEX3CQ5U5Q3 659 aaKnown RBP17.25■□□□□ 0.35
EXOSC1-210ENST00000485122 MAP3K1Q13233 1512 aa17.24■□□□□ 0.35
EXOSC1-210ENST00000485122 NLRP1Q9C000 1473 aa17.24■□□□□ 0.35
EXOSC1-210ENST00000485122 ZRANB1Q9UGI0 708 aa17.23■□□□□ 0.35
EXOSC1-210ENST00000485122 ADGBQ8N7X0 1667 aa17.21■□□□□ 0.35
EXOSC1-210ENST00000485122 TMEM94Q12767 1356 aa17.2■□□□□ 0.34
EXOSC1-210ENST00000485122 RBM33Q96EV2 1170 aaKnown RBP17.2■□□□□ 0.34
EXOSC1-210ENST00000485122 CDK11AQ9UQ88 783 aaPredicted RBP17.2■□□□□ 0.34
EXOSC1-210ENST00000485122 KDM5DQ9BY66 1539 aa17.2■□□□□ 0.34
EXOSC1-210ENST00000485122 MIA2Q96PC5 1412 aa17.2■□□□□ 0.34
EXOSC1-210ENST00000485122 LRRC9Q6ZRR7 1453 aa17.18■□□□□ 0.34
EXOSC1-210ENST00000485122 ZNF777Q9ULD5 760 aaPredicted RBP17.18■□□□□ 0.34
EXOSC1-210ENST00000485122 NUTM2BA6NNL0 878 aaPredicted RBP17.16■□□□□ 0.34
EXOSC1-210ENST00000485122 NUTM2EB1AL46 878 aaPredicted RBP17.16■□□□□ 0.34
EXOSC1-210ENST00000485122 HNRNPMP52272 730 aaKnown RBP eCLIP17.16■□□□□ 0.34
EXOSC1-210ENST00000485122 NUTM2DQ5VT03 806 aaPredicted RBP17.16■□□□□ 0.34
EXOSC1-210ENST00000485122 NUTM2AQ8IVF1 878 aaPredicted RBP17.16■□□□□ 0.34
EXOSC1-210ENST00000485122 SCAF11Q99590 1463 aaKnown RBP17.15■□□□□ 0.34
EXOSC1-210ENST00000485122 SHPRHQ149N8 1683 aa17.15■□□□□ 0.34
EXOSC1-210ENST00000485122 SPATA31A6Q5VVP1 1343 aa17.14■□□□□ 0.33
EXOSC1-210ENST00000485122 UBR1Q8IWV7 1749 aa17.13■□□□□ 0.33
EXOSC1-210ENST00000485122 TIAM1Q13009 1591 aa17.11■□□□□ 0.33
EXOSC1-210ENST00000485122 LRP5O75197 1615 aa17.11■□□□□ 0.33
EXOSC1-210ENST00000485122 FGD6Q6ZV73 1430 aa17.11■□□□□ 0.33
EXOSC1-210ENST00000485122 AFF2P51816 1311 aa17.1■□□□□ 0.33
EXOSC1-210ENST00000485122 LTKP29376 864 aa17.08■□□□□ 0.32
EXOSC1-210ENST00000485122 FMN1Q68DA7 1419 aa17.06■□□□□ 0.32
EXOSC1-210ENST00000485122 ATAD2Q6PL18 1390 aa17.06■□□□□ 0.32
EXOSC1-210ENST00000485122 IFFO2Q5TF58 517 aa17.06■□□□□ 0.32
EXOSC1-210ENST00000485122 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
EXOSC1-210ENST00000485122 CSRNP3Q8WYN3 585 aa17.05■□□□□ 0.32
EXOSC1-210ENST00000485122 NCOA2Q15596 1464 aa17.05■□□□□ 0.32
EXOSC1-210ENST00000485122 FOXD1Q16676 465 aa17.04■□□□□ 0.32
EXOSC1-210ENST00000485122 SLAIN2Q9P270 581 aa17.04■□□□□ 0.32
EXOSC1-210ENST00000485122 PRDM15P57071 1507 aaPredicted RBP17.04■□□□□ 0.32
EXOSC1-210ENST00000485122 ARHGAP23Q9P227 1491 aa17.04■□□□□ 0.32
EXOSC1-210ENST00000485122 WASHC2CQ9Y4E1 1318 aa17.03■□□□□ 0.32
EXOSC1-210ENST00000485122 KIF3BO15066 747 aa17.03■□□□□ 0.32
EXOSC1-210ENST00000485122 PROSER2Q86WR7 435 aaPredicted RBP17.03■□□□□ 0.32
EXOSC1-210ENST00000485122 DIP2AQ14689 1571 aa17.02■□□□□ 0.32
EXOSC1-210ENST00000485122 KDM5AP29375 1690 aaKnown RBP17.02■□□□□ 0.32
EXOSC1-210ENST00000485122 AHDC1Q5TGY3 1603 aaPredicted RBP17.02■□□□□ 0.31
EXOSC1-210ENST00000485122 MSH6P52701 1360 aa17.02■□□□□ 0.31
EXOSC1-210ENST00000485122 SLIT1O75093 1534 aa17.01■□□□□ 0.31
EXOSC1-210ENST00000485122 GPATCH8Q9UKJ3 1502 aaKnown RBP17.01■□□□□ 0.31
EXOSC1-210ENST00000485122 RBM6P78332 1123 aaKnown RBP17.01■□□□□ 0.31
EXOSC1-210ENST00000485122 TXNDC2Q86VQ3 553 aa17.01■□□□□ 0.31
EXOSC1-210ENST00000485122 ERVK-7P63135 1459 aa17■□□□□ 0.31
EXOSC1-210ENST00000485122 CFAP65Q6ZU64 1925 aaKnown RBP17■□□□□ 0.31
EXOSC1-210ENST00000485122 KIAA1107Q9UPP5 1409 aa17■□□□□ 0.31
EXOSC1-210ENST00000485122 DHX29Q7Z478 1369 aaKnown RBP17■□□□□ 0.31
EXOSC1-210ENST00000485122 NWD1Q149M9 1564 aa16.99■□□□□ 0.31
EXOSC1-210ENST00000485122 QTRT2Q9H974 415 aaKnown RBP16.98■□□□□ 0.31
EXOSC1-210ENST00000485122 ARHGAP35Q9NRY4 1499 aa16.98■□□□□ 0.31
EXOSC1-210ENST00000485122 KCNA6P17658 529 aa16.97■□□□□ 0.31
EXOSC1-210ENST00000485122 NKTRP30414 1462 aaKnown RBP16.97■□□□□ 0.31
EXOSC1-210ENST00000485122 PLEKHH2Q8IVE3 1493 aa16.96■□□□□ 0.31
EXOSC1-210ENST00000485122 C8orf37Q96NL8 207 aa16.95■□□□□ 0.3
EXOSC1-210ENST00000485122 ABCC3O15438 1527 aa16.93■□□□□ 0.3
EXOSC1-210ENST00000485122 MAST1Q9Y2H9 1570 aa16.93■□□□□ 0.3
EXOSC1-210ENST00000485122 SLC26A8Q96RN1 970 aa16.92■□□□□ 0.3
EXOSC1-210ENST00000485122 YY1P25490 414 aa16.91■□□□□ 0.3
EXOSC1-210ENST00000485122 CEP152O94986 1710 aa16.9■□□□□ 0.3
EXOSC1-210ENST00000485122 NHSL1Q5SYE7 1610 aa16.9■□□□□ 0.3
EXOSC1-210ENST00000485122 EP400Q96L91 3159 aa16.89■□□□□ 0.3
EXOSC1-210ENST00000485122 PIK3C2BO00750 1634 aa16.89■□□□□ 0.29
EXOSC1-210ENST00000485122 TET3O43151 1660 aa16.89■□□□□ 0.29
EXOSC1-210ENST00000485122 CCDC18Q5T9S5 1454 aa16.89■□□□□ 0.29
EXOSC1-210ENST00000485122 RTEL1-TNFRSF6BF6WH68 1400 aa16.88■□□□□ 0.29
EXOSC1-210ENST00000485122 MBD5Q9P267 1494 aa16.88■□□□□ 0.29
EXOSC1-210ENST00000485122 CFDP1Q9UEE9 299 aaPredicted RBP16.88■□□□□ 0.29
EXOSC1-210ENST00000485122 EID1Q9Y6B2 187 aa16.88■□□□□ 0.29
EXOSC1-210ENST00000485122 ZNF644Q9H582 1327 aaPredicted RBP16.88■□□□□ 0.29
EXOSC1-210ENST00000485122 NGLY1Q96IV0 654 aa16.86■□□□□ 0.29
EXOSC1-210ENST00000485122 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.85■□□□□ 0.29
EXOSC1-210ENST00000485122 TMEM2Q9UHN6 1383 aa16.85■□□□□ 0.29
EXOSC1-210ENST00000485122 PSDA5PKW4 1024 aaPredicted RBP16.84■□□□□ 0.29
EXOSC1-210ENST00000485122 DEFB132Q7Z7B7 95 aa16.84■□□□□ 0.29
EXOSC1-210ENST00000485122 CAMSAP2Q08AD1 1489 aa16.83■□□□□ 0.28
EXOSC1-210ENST00000485122 CCDC125Q86Z20 511 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms