RNA–Protein interactions for RNA: ENST00000484968.1

NEB-213, Transcript of nebulin, humanhuman

TSL 4

Gene NEB, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-213ENST00000484968 DEPDC5O75140 1603 aa13.99□□□□□ -0.17
NEB-213ENST00000484968 EIF2AK4Q9P2K8 1649 aaKnown RBP13.99□□□□□ -0.17
NEB-213ENST00000484968 PZPP20742 1482 aa13.99□□□□□ -0.17
NEB-213ENST00000484968 RNF17Q9BXT8 1623 aaKnown RBP13.98□□□□□ -0.17
NEB-213ENST00000484968 UNC13BO14795 1591 aa13.98□□□□□ -0.17
NEB-213ENST00000484968 MLECQ14165 292 aa13.98□□□□□ -0.17
NEB-213ENST00000484968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.98□□□□□ -0.17
NEB-213ENST00000484968 VWDEQ8N2E2 1590 aa13.97□□□□□ -0.17
NEB-213ENST00000484968 NUP155O75694 1391 aa13.96□□□□□ -0.17
NEB-213ENST00000484968 PRDM15P57071 1507 aaPredicted RBP13.96□□□□□ -0.17
NEB-213ENST00000484968 KDM5DQ9BY66 1539 aa13.95□□□□□ -0.18
NEB-213ENST00000484968 ARID4BQ4LE39 1312 aaPredicted RBP13.95□□□□□ -0.18
NEB-213ENST00000484968 TRIM52Q96A61 297 aa13.95□□□□□ -0.18
NEB-213ENST00000484968 DHX57Q6P158 1386 aaKnown RBP13.94□□□□□ -0.18
NEB-213ENST00000484968 MPHOSPH9Q99550 1183 aa13.93□□□□□ -0.18
NEB-213ENST00000484968 FAM135AQ9P2D6 1515 aa13.93□□□□□ -0.18
NEB-213ENST00000484968 ABCC3O15438 1527 aa13.92□□□□□ -0.18
NEB-213ENST00000484968 FOXD1Q16676 465 aa13.92□□□□□ -0.18
NEB-213ENST00000484968 IQGAP3Q86VI3 1631 aa13.92□□□□□ -0.18
NEB-213ENST00000484968 LMTK2Q8IWU2 1503 aa13.9□□□□□ -0.18
NEB-213ENST00000484968 WASHC2CQ9Y4E1 1318 aa13.9□□□□□ -0.19
NEB-213ENST00000484968 SLC4A1APQ9BWU0 796 aaKnown RBP13.89□□□□□ -0.19
NEB-213ENST00000484968 CEP152O94986 1710 aa13.88□□□□□ -0.19
NEB-213ENST00000484968 PKD2Q13563 968 aa13.88□□□□□ -0.19
NEB-213ENST00000484968 ADAMTSL3P82987 1691 aa13.88□□□□□ -0.19
NEB-213ENST00000484968 PLA2R1Q13018 1463 aa13.87□□□□□ -0.19
NEB-213ENST00000484968 KDM4FA0A1W2PPD8 638 aa13.87□□□□□ -0.19
NEB-213ENST00000484968 PPP6R1Q9UPN7 881 aa13.87□□□□□ -0.19
NEB-213ENST00000484968 KANK1Q14678 1352 aa13.86□□□□□ -0.19
NEB-213ENST00000484968 CLTCQ00610 1675 aaKnown RBP13.86□□□□□ -0.19
NEB-213ENST00000484968 FBXO31Q5XUX0 539 aaPredicted RBP13.86□□□□□ -0.19
NEB-213ENST00000484968 NPATQ14207 1427 aa13.86□□□□□ -0.19
NEB-213ENST00000484968 MADDQ8WXG6 1647 aa13.86□□□□□ -0.19
NEB-213ENST00000484968 EFCAB6Q5THR3 1501 aa13.85□□□□□ -0.19
NEB-213ENST00000484968 CEBPAP49715 358 aaPredicted RBP13.85□□□□□ -0.19
NEB-213ENST00000484968 E9PCH4 1651 aa13.85□□□□□ -0.19
NEB-213ENST00000484968 TET3O43151 1660 aa13.85□□□□□ -0.19
NEB-213ENST00000484968 ZMYM3Q14202 1370 aa13.84□□□□□ -0.19
NEB-213ENST00000484968 CAMSAP1Q5T5Y3 1602 aa13.84□□□□□ -0.19
NEB-213ENST00000484968 ARHGAP31Q2M1Z3 1444 aa13.83□□□□□ -0.2
NEB-213ENST00000484968 ACIN1Q9UKV3 1341 aaKnown RBP13.83□□□□□ -0.2
NEB-213ENST00000484968 ANKRD30BQ9BXX2 1392 aa13.83□□□□□ -0.2
NEB-213ENST00000484968 ZC3H13Q5T200 1668 aaKnown RBP13.82□□□□□ -0.2
NEB-213ENST00000484968 PTPRTO14522 1441 aa13.81□□□□□ -0.2
NEB-213ENST00000484968 SIN3AQ96ST3 1273 aa13.8□□□□□ -0.2
NEB-213ENST00000484968 FER1L4A9Z1Z3 1794 aa13.8□□□□□ -0.2
NEB-213ENST00000484968 NOS1P29475 1434 aa13.8□□□□□ -0.2
NEB-213ENST00000484968 CNTLNQ9NXG0 1405 aa13.8□□□□□ -0.2
NEB-213ENST00000484968 RIMS1Q86UR5 1692 aaKnown RBP13.79□□□□□ -0.2
NEB-213ENST00000484968 UGGT1Q9NYU2 1555 aa13.79□□□□□ -0.2
NEB-213ENST00000484968 CCER1Q8TC90 406 aaPredicted RBP13.78□□□□□ -0.2
NEB-213ENST00000484968 ERVK-7P63135 1459 aa13.78□□□□□ -0.2
NEB-213ENST00000484968 RPRD2Q5VT52 1461 aaKnown RBP13.78□□□□□ -0.2
NEB-213ENST00000484968 SYNMO15061 1565 aa13.78□□□□□ -0.2
NEB-213ENST00000484968 C3P01024 1663 aa13.78□□□□□ -0.2
NEB-213ENST00000484968 MROH2AA6NES4 1674 aa13.77□□□□□ -0.21
NEB-213ENST00000484968 PTPRMP28827 1452 aa13.77□□□□□ -0.21
NEB-213ENST00000484968 PLPPR3Q6T4P5 718 aa13.77□□□□□ -0.21
NEB-213ENST00000484968 ESF1Q9H501 851 aaKnown RBP13.77□□□□□ -0.21
NEB-213ENST00000484968 SPATA31D1Q6ZQQ2 1576 aa13.75□□□□□ -0.21
NEB-213ENST00000484968 PREX1Q8TCU6 1659 aa13.75□□□□□ -0.21
NEB-213ENST00000484968 TRPM2O94759 1503 aa13.74□□□□□ -0.21
NEB-213ENST00000484968 CLTCL1P53675 1640 aa13.73□□□□□ -0.21
NEB-213ENST00000484968 IDI1Q13907 227 aa13.73□□□□□ -0.21
NEB-213ENST00000484968 SPHKAPQ2M3C7 1700 aa13.73□□□□□ -0.21
NEB-213ENST00000484968 CFAP65Q6ZU64 1925 aaKnown RBP13.72□□□□□ -0.21
NEB-213ENST00000484968 PIK3C2BO00750 1634 aa13.72□□□□□ -0.21
NEB-213ENST00000484968 NEUROD1Q13562 356 aa13.71□□□□□ -0.21
NEB-213ENST00000484968 TNRQ92752 1358 aa13.71□□□□□ -0.22
NEB-213ENST00000484968 CLSPNQ9HAW4 1339 aa13.69□□□□□ -0.22
NEB-213ENST00000484968 SPATA31E1Q6ZUB1 1445 aa13.69□□□□□ -0.22
NEB-213ENST00000484968 CCDC144AA2RUR9 1427 aa13.68□□□□□ -0.22
NEB-213ENST00000484968 SLC52A1Q9NWF4 448 aa13.67□□□□□ -0.22
NEB-213ENST00000484968 TMEM131LA2VDJ0 1609 aa13.64□□□□□ -0.23
NEB-213ENST00000484968 A2ML1A8K2U0 1454 aa13.64□□□□□ -0.23
NEB-213ENST00000484968 RGL3Q3MIN7 710 aa13.64□□□□□ -0.23
NEB-213ENST00000484968 L3MBTL2Q969R5 705 aa13.64□□□□□ -0.23
NEB-213ENST00000484968 MYO3AQ8NEV4 1616 aa13.64□□□□□ -0.23
NEB-213ENST00000484968 ADGRB3O60242 1522 aa13.64□□□□□ -0.23
NEB-213ENST00000484968 NLRP1Q9C000 1473 aa13.62□□□□□ -0.23
NEB-213ENST00000484968 CHGAP10645 457 aaKnown RBP13.62□□□□□ -0.23
NEB-213ENST00000484968 UBR1Q8IWV7 1749 aa13.6□□□□□ -0.23
NEB-213ENST00000484968 NEURL4Q96JN8 1562 aa13.6□□□□□ -0.23
NEB-213ENST00000484968 CEP170BQ9Y4F5 1589 aaPredicted RBP13.6□□□□□ -0.23
NEB-213ENST00000484968 NUTM2DQ5VT03 806 aaPredicted RBP13.59□□□□□ -0.23
NEB-213ENST00000484968 MYO5BQ9ULV0 1848 aa13.59□□□□□ -0.23
NEB-213ENST00000484968 ZFYVE9O95405 1425 aa13.58□□□□□ -0.24
NEB-213ENST00000484968 NEXMIFQ5QGS0 1516 aa13.58□□□□□ -0.24
NEB-213ENST00000484968 LMTK3Q96Q04 1460 aa13.57□□□□□ -0.24
NEB-213ENST00000484968 LTKP29376 864 aa13.57□□□□□ -0.24
NEB-213ENST00000484968 NBPF8Q3BBV2 869 aa13.57□□□□□ -0.24
NEB-213ENST00000484968 DCAF11Q8TEB1 546 aa13.57□□□□□ -0.24
NEB-213ENST00000484968 ZNF142P52746 1687 aaPredicted RBP13.56□□□□□ -0.24
NEB-213ENST00000484968 UHRF1BP1Q6BDS2 1440 aa13.56□□□□□ -0.24
NEB-213ENST00000484968 ARHGAP23Q9P227 1491 aa13.56□□□□□ -0.24
NEB-213ENST00000484968 KIF1BO60333 1816 aa13.56□□□□□ -0.24
NEB-213ENST00000484968 PPP1R15AO75807 674 aaPredicted RBP13.56□□□□□ -0.24
NEB-213ENST00000484968 HSPA2P54652 639 aa13.56□□□□□ -0.24
NEB-213ENST00000484968 ZNF326Q5BKZ1 582 aaKnown RBP13.56□□□□□ -0.24
NEB-213ENST00000484968 ADGRF5Q8IZF2 1346 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms