RNA–Protein interactions for RNA: ENST00000484752.5

RFTN1-210, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-210ENST00000484752 NUP155O75694 1391 aa17.03■□□□□ 0.32
RFTN1-210ENST00000484752 UNC13BO14795 1591 aa17.03■□□□□ 0.32
RFTN1-210ENST00000484752 KDM5DQ9BY66 1539 aa17.02■□□□□ 0.32
RFTN1-210ENST00000484752 AGLP35573 1532 aa17.01■□□□□ 0.31
RFTN1-210ENST00000484752 BCORL1Q5H9F3 1711 aa17.01■□□□□ 0.31
RFTN1-210ENST00000484752 DHX57Q6P158 1386 aaKnown RBP17.01■□□□□ 0.31
RFTN1-210ENST00000484752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.31
RFTN1-210ENST00000484752 SLC4A1APQ9BWU0 796 aaKnown RBP17■□□□□ 0.31
RFTN1-210ENST00000484752 CLSPNQ9HAW4 1339 aa16.99■□□□□ 0.31
RFTN1-210ENST00000484752 PRDM15P57071 1507 aaPredicted RBP16.99■□□□□ 0.31
RFTN1-210ENST00000484752 DEPDC5O75140 1603 aa16.99■□□□□ 0.31
RFTN1-210ENST00000484752 RNF17Q9BXT8 1623 aaKnown RBP16.99■□□□□ 0.31
RFTN1-210ENST00000484752 ARID4BQ4LE39 1312 aaPredicted RBP16.97■□□□□ 0.31
RFTN1-210ENST00000484752 FAM135AQ9P2D6 1515 aa16.97■□□□□ 0.31
RFTN1-210ENST00000484752 MPHOSPH9Q99550 1183 aa16.97■□□□□ 0.31
RFTN1-210ENST00000484752 IQGAP3Q86VI3 1631 aa16.96■□□□□ 0.31
RFTN1-210ENST00000484752 GGT6Q6P531 493 aa16.96■□□□□ 0.31
RFTN1-210ENST00000484752 PPP6R1Q9UPN7 881 aa16.96■□□□□ 0.31
RFTN1-210ENST00000484752 PZPP20742 1482 aa16.94■□□□□ 0.3
RFTN1-210ENST00000484752 ESF1Q9H501 851 aaKnown RBP16.93■□□□□ 0.3
RFTN1-210ENST00000484752 WASHC2CQ9Y4E1 1318 aa16.93■□□□□ 0.3
RFTN1-210ENST00000484752 ZC3H13Q5T200 1668 aaKnown RBP16.91■□□□□ 0.3
RFTN1-210ENST00000484752 VWDEQ8N2E2 1590 aa16.91■□□□□ 0.3
RFTN1-210ENST00000484752 PKD2Q13563 968 aa16.91■□□□□ 0.3
RFTN1-210ENST00000484752 MROH1Q8NDA8 1641 aa16.91■□□□□ 0.3
RFTN1-210ENST00000484752 LMTK2Q8IWU2 1503 aa16.91■□□□□ 0.3
RFTN1-210ENST00000484752 TET3O43151 1660 aa16.89■□□□□ 0.29
RFTN1-210ENST00000484752 ZEB1P37275 1124 aaPredicted RBP16.89■□□□□ 0.29
RFTN1-210ENST00000484752 ABCC3O15438 1527 aa16.87■□□□□ 0.29
RFTN1-210ENST00000484752 MLECQ14165 292 aa16.87■□□□□ 0.29
RFTN1-210ENST00000484752 CNTLNQ9NXG0 1405 aa16.86■□□□□ 0.29
RFTN1-210ENST00000484752 RPRD2Q5VT52 1461 aaKnown RBP16.86■□□□□ 0.29
RFTN1-210ENST00000484752 EFCAB6Q5THR3 1501 aa16.86■□□□□ 0.29
RFTN1-210ENST00000484752 CEP152O94986 1710 aa16.82■□□□□ 0.28
RFTN1-210ENST00000484752 SIGLEC1Q9BZZ2 1709 aa16.82■□□□□ 0.28
RFTN1-210ENST00000484752 CAMSAP1Q5T5Y3 1602 aa16.82■□□□□ 0.28
RFTN1-210ENST00000484752 ARHGAP31Q2M1Z3 1444 aa16.82■□□□□ 0.28
RFTN1-210ENST00000484752 ANKRD30BQ9BXX2 1392 aa16.81■□□□□ 0.28
RFTN1-210ENST00000484752 FOXD1Q16676 465 aa16.81■□□□□ 0.28
RFTN1-210ENST00000484752 CCDC144AA2RUR9 1427 aa16.8■□□□□ 0.28
RFTN1-210ENST00000484752 E9PCH4 1651 aa16.79■□□□□ 0.28
RFTN1-210ENST00000484752 NPATQ14207 1427 aa16.79■□□□□ 0.28
RFTN1-210ENST00000484752 CLTCQ00610 1675 aaKnown RBP16.78■□□□□ 0.28
RFTN1-210ENST00000484752 TIMELESSQ9UNS1 1208 aa16.77■□□□□ 0.28
RFTN1-210ENST00000484752 TRPM2O94759 1503 aa16.76■□□□□ 0.27
RFTN1-210ENST00000484752 NEUROD1Q13562 356 aa16.76■□□□□ 0.27
RFTN1-210ENST00000484752 PTPRTO14522 1441 aa16.76■□□□□ 0.27
RFTN1-210ENST00000484752 TONSLQ96HA7 1378 aa16.76■□□□□ 0.27
RFTN1-210ENST00000484752 MROH2AA6NES4 1674 aa16.75■□□□□ 0.27
RFTN1-210ENST00000484752 SPHKAPQ2M3C7 1700 aa16.75■□□□□ 0.27
RFTN1-210ENST00000484752 ZMYM3Q14202 1370 aa16.74■□□□□ 0.27
RFTN1-210ENST00000484752 FER1L4A9Z1Z3 1794 aa16.74■□□□□ 0.27
RFTN1-210ENST00000484752 SIN3AQ96ST3 1273 aa16.72■□□□□ 0.27
RFTN1-210ENST00000484752 NOS1P29475 1434 aa16.7■□□□□ 0.26
RFTN1-210ENST00000484752 ERVK-7P63135 1459 aa16.7■□□□□ 0.26
RFTN1-210ENST00000484752 PLA2R1Q13018 1463 aa16.7■□□□□ 0.26
RFTN1-210ENST00000484752 SLC52A1Q9NWF4 448 aa16.7■□□□□ 0.26
RFTN1-210ENST00000484752 PREX1Q8TCU6 1659 aa16.69■□□□□ 0.26
RFTN1-210ENST00000484752 MADDQ8WXG6 1647 aa16.68■□□□□ 0.26
RFTN1-210ENST00000484752 ADAMTSL3P82987 1691 aa16.68■□□□□ 0.26
RFTN1-210ENST00000484752 SPATA31D1Q6ZQQ2 1576 aa16.68■□□□□ 0.26
RFTN1-210ENST00000484752 CLTCL1P53675 1640 aa16.65■□□□□ 0.26
RFTN1-210ENST00000484752 RIMS1Q86UR5 1692 aaKnown RBP16.65■□□□□ 0.26
RFTN1-210ENST00000484752 TNRQ92752 1358 aa16.64■□□□□ 0.26
RFTN1-210ENST00000484752 SYNMO15061 1565 aa16.64■□□□□ 0.25
RFTN1-210ENST00000484752 NEURL4Q96JN8 1562 aa16.64■□□□□ 0.25
RFTN1-210ENST00000484752 FBXO31Q5XUX0 539 aaPredicted RBP16.63■□□□□ 0.25
RFTN1-210ENST00000484752 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
RFTN1-210ENST00000484752 C3P01024 1663 aa16.62■□□□□ 0.25
RFTN1-210ENST00000484752 CHGAP10645 457 aaKnown RBP16.62■□□□□ 0.25
RFTN1-210ENST00000484752 STAC3Q96MF2 364 aa16.62■□□□□ 0.25
RFTN1-210ENST00000484752 PIK3C2BO00750 1634 aa16.62■□□□□ 0.25
RFTN1-210ENST00000484752 KIF1BO60333 1816 aa16.61■□□□□ 0.25
RFTN1-210ENST00000484752 NLRP1Q9C000 1473 aa16.61■□□□□ 0.25
RFTN1-210ENST00000484752 UGGT1Q9NYU2 1555 aa16.6■□□□□ 0.25
RFTN1-210ENST00000484752 RGL3Q3MIN7 710 aa16.59■□□□□ 0.25
RFTN1-210ENST00000484752 ZNF326Q5BKZ1 582 aaKnown RBP16.59■□□□□ 0.25
RFTN1-210ENST00000484752 PLPPR3Q6T4P5 718 aa16.59■□□□□ 0.25
RFTN1-210ENST00000484752 L3MBTL2Q969R5 705 aa16.59■□□□□ 0.25
RFTN1-210ENST00000484752 SPATA31E1Q6ZUB1 1445 aa16.59■□□□□ 0.25
RFTN1-210ENST00000484752 ADGRB3O60242 1522 aa16.59■□□□□ 0.25
RFTN1-210ENST00000484752 CFAP65Q6ZU64 1925 aaKnown RBP16.58■□□□□ 0.25
RFTN1-210ENST00000484752 CEBPAP49715 358 aaPredicted RBP16.58■□□□□ 0.24
RFTN1-210ENST00000484752 IDI1Q13907 227 aa16.58■□□□□ 0.24
RFTN1-210ENST00000484752 RPGRIP1LQ68CZ1 1315 aa16.58■□□□□ 0.24
RFTN1-210ENST00000484752 PTPRMP28827 1452 aa16.57■□□□□ 0.24
RFTN1-210ENST00000484752 DCAF11Q8TEB1 546 aa16.56■□□□□ 0.24
RFTN1-210ENST00000484752 PPP1R15AO75807 674 aaPredicted RBP16.55■□□□□ 0.24
RFTN1-210ENST00000484752 KDM4FA0A1W2PPD8 638 aa16.54■□□□□ 0.24
RFTN1-210ENST00000484752 HDGFP51858 240 aaKnown RBP16.54■□□□□ 0.24
RFTN1-210ENST00000484752 KDM5AP29375 1690 aaKnown RBP16.53■□□□□ 0.24
RFTN1-210ENST00000484752 TMEM131LA2VDJ0 1609 aa16.52■□□□□ 0.23
RFTN1-210ENST00000484752 MYO3AQ8NEV4 1616 aa16.52■□□□□ 0.23
RFTN1-210ENST00000484752 A2ML1A8K2U0 1454 aa16.51■□□□□ 0.23
RFTN1-210ENST00000484752 MYOM2P54296 1465 aa16.51■□□□□ 0.23
RFTN1-210ENST00000484752 KDM2AQ9Y2K7 1162 aa16.51■□□□□ 0.23
RFTN1-210ENST00000484752 VGFO15240 615 aaPredicted RBP16.5■□□□□ 0.23
RFTN1-210ENST00000484752 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.5■□□□□ 0.23
RFTN1-210ENST00000484752 UHRF1BP1Q6BDS2 1440 aa16.5■□□□□ 0.23
RFTN1-210ENST00000484752 THEMISQ8N1K5 641 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms