RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 DUOX2Q9NRD8 1548 aa40.74■■■■■ 4.11
SMDT1-203ENST00000484235 CERKQ8TCT0 537 aa40.73■■■■■ 4.11
SMDT1-203ENST00000484235 NCOA1Q15788 1441 aa40.73■■■■■ 4.11
SMDT1-203ENST00000484235 SETD1BQ9UPS6 1966 aaKnown RBP40.7■■■■■ 4.11
SMDT1-203ENST00000484235 RRBP1Q9P2E9 1410 aaKnown RBP40.7■■■■■ 4.11
SMDT1-203ENST00000484235 ADGRL2O95490 1459 aa40.68■■■■■ 4.1
SMDT1-203ENST00000484235 PTPRKQ15262 1439 aa40.66■■■■■ 4.1
SMDT1-203ENST00000484235 UHRF1BP1Q6BDS2 1440 aa40.65■■■■■ 4.1
SMDT1-203ENST00000484235 ZMYM3Q14202 1370 aa40.63■■■■■ 4.1
SMDT1-203ENST00000484235 ERBINQ96RT1 1412 aa40.63■■■■■ 4.09
SMDT1-203ENST00000484235 ITGAEP38570 1179 aa40.62■■■■■ 4.09
SMDT1-203ENST00000484235 STRCQ7RTU9 1775 aa40.61■■■■■ 4.09
SMDT1-203ENST00000484235 EIF2AK4Q9P2K8 1649 aaKnown RBP40.6■■■■■ 4.09
SMDT1-203ENST00000484235 C3P01024 1663 aa40.6■■■■■ 4.09
SMDT1-203ENST00000484235 WASHC2CQ9Y4E1 1318 aa40.6■■■■■ 4.09
SMDT1-203ENST00000484235 DMRT2Q9Y5R5 561 aa40.57■■■■■ 4.09
SMDT1-203ENST00000484235 ROCK1Q13464 1354 aa40.57■■■■■ 4.08
SMDT1-203ENST00000484235 MROH2AA6NES4 1674 aa40.54■■■■■ 4.08
SMDT1-203ENST00000484235 CLTCQ00610 1675 aaKnown RBP40.54■■■■■ 4.08
SMDT1-203ENST00000484235 FAM135AQ9P2D6 1515 aa40.54■■■■■ 4.08
SMDT1-203ENST00000484235 RNF17Q9BXT8 1623 aaKnown RBP40.53■■■■■ 4.08
SMDT1-203ENST00000484235 KDM5DQ9BY66 1539 aa40.5■■■■■ 4.07
SMDT1-203ENST00000484235 ANKRD50Q9ULJ7 1429 aa40.47■■■■■ 4.07
SMDT1-203ENST00000484235 NPATQ14207 1427 aa40.44■■■■■ 4.06
SMDT1-203ENST00000484235 PTPRTO14522 1441 aa40.43■■■■■ 4.06
SMDT1-203ENST00000484235 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.43■■■■■ 4.06
SMDT1-203ENST00000484235 MROH1Q8NDA8 1641 aa40.42■■■■■ 4.06
SMDT1-203ENST00000484235 KANK1Q14678 1352 aa40.38■■■■■ 4.06
SMDT1-203ENST00000484235 ABCC3O15438 1527 aa40.38■■■■■ 4.06
SMDT1-203ENST00000484235 PRDM15P57071 1507 aaPredicted RBP40.37■■■■■ 4.05
SMDT1-203ENST00000484235 DEPDC5O75140 1603 aa40.34■■■■■ 4.05
SMDT1-203ENST00000484235 PZPP20742 1482 aa40.33■■■■■ 4.05
SMDT1-203ENST00000484235 ZC3H13Q5T200 1668 aaKnown RBP40.32■■■■■ 4.05
SMDT1-203ENST00000484235 FBXO31Q5XUX0 539 aaPredicted RBP40.32■■■■■ 4.05
SMDT1-203ENST00000484235 LTBP4Q8N2S1 1624 aa40.24■■■■■ 4.03
SMDT1-203ENST00000484235 VWDEQ8N2E2 1590 aa40.23■■■■■ 4.03
SMDT1-203ENST00000484235 ARHGAP31Q2M1Z3 1444 aa40.21■■■■■ 4.03
SMDT1-203ENST00000484235 TNRQ92752 1358 aa40.21■■■■■ 4.03
SMDT1-203ENST00000484235 CEP152O94986 1710 aa40.2■■■■■ 4.03
SMDT1-203ENST00000484235 LMTK2Q8IWU2 1503 aa40.2■■■■■ 4.03
SMDT1-203ENST00000484235 CAMSAP1Q5T5Y3 1602 aa40.19■■■■■ 4.02
SMDT1-203ENST00000484235 NAIPQ13075 1403 aa40.18■■■■■ 4.02
SMDT1-203ENST00000484235 HFM1A2PYH4 1435 aa40.14■■■■■ 4.02
SMDT1-203ENST00000484235 UNC13BO14795 1591 aa40.12■■■■■ 4.01
SMDT1-203ENST00000484235 NCKAP5LQ9HCH0 1330 aa40.12■■■■■ 4.01
SMDT1-203ENST00000484235 ERVK-7P63135 1459 aa40.1■■■■■ 4.01
SMDT1-203ENST00000484235 NUP155O75694 1391 aa40.1■■■■■ 4.01
SMDT1-203ENST00000484235 SPATA31D1Q6ZQQ2 1576 aa40.09■■■■■ 4.01
SMDT1-203ENST00000484235 MYO3AQ8NEV4 1616 aa40.09■■■■■ 4.01
SMDT1-203ENST00000484235 PLA2R1Q13018 1463 aa40.06■■■■■ 4
SMDT1-203ENST00000484235 A2ML1A8K2U0 1454 aa40.05■■■■■ 4
SMDT1-203ENST00000484235 IQSEC2Q5JU85 1478 aa40.05■■■■■ 4
SMDT1-203ENST00000484235 ZNF142P52746 1687 aaPredicted RBP40.05■■■■■ 4
SMDT1-203ENST00000484235 NLRP1Q9C000 1473 aa40.04■■■■■ 4
SMDT1-203ENST00000484235 CEP170BQ9Y4F5 1589 aaPredicted RBP40.04■■■■■ 4
SMDT1-203ENST00000484235 EFCAB6Q5THR3 1501 aa40.03■■■■■ 4
SMDT1-203ENST00000484235 PKD2Q13563 968 aa40.03■■■■■ 4
SMDT1-203ENST00000484235 GCC2Q8IWJ2 1684 aa40.02■■■■■ 4
SMDT1-203ENST00000484235 RPRD2Q5VT52 1461 aaKnown RBP39.98■■■■□ 3.99
SMDT1-203ENST00000484235 ZNF335Q9H4Z2 1342 aaPredicted RBP39.97■■■■□ 3.99
SMDT1-203ENST00000484235 IQGAP3Q86VI3 1631 aa39.97■■■■□ 3.99
SMDT1-203ENST00000484235 TET3O43151 1660 aa39.96■■■■□ 3.99
SMDT1-203ENST00000484235 CFAP65Q6ZU64 1925 aaKnown RBP39.96■■■■□ 3.99
SMDT1-203ENST00000484235 THEMISQ8N1K5 641 aaPredicted RBP39.95■■■■□ 3.99
SMDT1-203ENST00000484235 NOS1P29475 1434 aa39.91■■■■□ 3.98
SMDT1-203ENST00000484235 TRIM52Q96A61 297 aa39.9■■■■□ 3.98
SMDT1-203ENST00000484235 SLC52A1Q9NWF4 448 aa39.87■■■■□ 3.97
SMDT1-203ENST00000484235 UGGT1Q9NYU2 1555 aa39.87■■■■□ 3.97
SMDT1-203ENST00000484235 DISP3Q9P2K9 1392 aa39.86■■■■□ 3.97
SMDT1-203ENST00000484235 IDI1Q13907 227 aa39.85■■■■□ 3.97
SMDT1-203ENST00000484235 ILDR2Q71H61 639 aa39.84■■■■□ 3.97
SMDT1-203ENST00000484235 SETD5Q9C0A6 1442 aa39.82■■■■□ 3.96
SMDT1-203ENST00000484235 ACIN1Q9UKV3 1341 aaKnown RBP39.8■■■■□ 3.96
SMDT1-203ENST00000484235 SYNMO15061 1565 aa39.8■■■■□ 3.96
SMDT1-203ENST00000484235 E9PCH4 1651 aa39.8■■■■□ 3.96
SMDT1-203ENST00000484235 ANKLE2Q86XL3 938 aa39.77■■■■□ 3.96
SMDT1-203ENST00000484235 STAG3Q9UJ98 1225 aa39.77■■■■□ 3.96
SMDT1-203ENST00000484235 SLC4A1APQ9BWU0 796 aaKnown RBP39.74■■■■□ 3.95
SMDT1-203ENST00000484235 UBAP1LF5GYI3 381 aa39.72■■■■□ 3.95
SMDT1-203ENST00000484235 UBR1Q8IWV7 1749 aa39.7■■■■□ 3.95
SMDT1-203ENST00000484235 PIK3C2BO00750 1634 aa39.69■■■■□ 3.94
SMDT1-203ENST00000484235 NEURL4Q96JN8 1562 aa39.69■■■■□ 3.94
SMDT1-203ENST00000484235 RAB3GAP2Q9H2M9 1393 aa39.66■■■■□ 3.94
SMDT1-203ENST00000484235 KDM5AP29375 1690 aaKnown RBP39.62■■■■□ 3.93
SMDT1-203ENST00000484235 MPHOSPH9Q99550 1183 aa39.62■■■■□ 3.93
SMDT1-203ENST00000484235 TMEM2Q9UHN6 1383 aa39.61■■■■□ 3.93
SMDT1-203ENST00000484235 HRCP23327 699 aa39.6■■■■□ 3.93
SMDT1-203ENST00000484235 TXNDC2Q86VQ3 553 aa39.6■■■■□ 3.93
SMDT1-203ENST00000484235 EID1Q9Y6B2 187 aa39.6■■■■□ 3.93
SMDT1-203ENST00000484235 ARHGAP23Q9P227 1491 aa39.6■■■■□ 3.93
SMDT1-203ENST00000484235 SLIT1O75093 1534 aa39.6■■■■□ 3.93
SMDT1-203ENST00000484235 POLR1AO95602 1720 aaPredicted RBP39.59■■■■□ 3.93
SMDT1-203ENST00000484235 ADGRB3O60242 1522 aa39.58■■■■□ 3.93
SMDT1-203ENST00000484235 SOCS7O14512 581 aa39.57■■■■□ 3.93
SMDT1-203ENST00000484235 LTKP29376 864 aa39.57■■■■□ 3.93
SMDT1-203ENST00000484235 MED14O60244 1454 aa39.56■■■■□ 3.92
SMDT1-203ENST00000484235 CHGAP10645 457 aaKnown RBP39.55■■■■□ 3.92
SMDT1-203ENST00000484235 SPHKAPQ2M3C7 1700 aa39.52■■■■□ 3.92
SMDT1-203ENST00000484235 CPS1P31327 1500 aa39.52■■■■□ 3.92
SMDT1-203ENST00000484235 SCAF11Q99590 1463 aaKnown RBP39.52■■■■□ 3.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms