RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 RNF17Q9BXT8 1623 aaKnown RBP30.78■■■□□ 2.52
RXRB-204ENST00000483281 UNC13BO14795 1591 aa30.78■■■□□ 2.52
RXRB-204ENST00000483281 PPP6R1Q9UPN7 881 aa30.73■■■□□ 2.51
RXRB-204ENST00000483281 KDM5DQ9BY66 1539 aa30.71■■■□□ 2.51
RXRB-204ENST00000483281 TRIM52Q96A61 297 aa30.71■■■□□ 2.51
RXRB-204ENST00000483281 MROH1Q8NDA8 1641 aa30.71■■■□□ 2.51
RXRB-204ENST00000483281 PRDM15P57071 1507 aaPredicted RBP30.7■■■□□ 2.51
RXRB-204ENST00000483281 NUP155O75694 1391 aa30.7■■■□□ 2.5
RXRB-204ENST00000483281 GGT6Q6P531 493 aa30.68■■■□□ 2.5
RXRB-204ENST00000483281 VWDEQ8N2E2 1590 aa30.68■■■□□ 2.5
RXRB-204ENST00000483281 KANK1Q14678 1352 aa30.67■■■□□ 2.5
RXRB-204ENST00000483281 ARID4BQ4LE39 1312 aaPredicted RBP30.67■■■□□ 2.5
RXRB-204ENST00000483281 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.66■■■□□ 2.51e-7■□□□□ 10.6
RXRB-204ENST00000483281 IQGAP3Q86VI3 1631 aa30.66■■■□□ 2.5
RXRB-204ENST00000483281 FAM135AQ9P2D6 1515 aa30.64■■■□□ 2.49
RXRB-204ENST00000483281 PZPP20742 1482 aa30.62■■■□□ 2.49
RXRB-204ENST00000483281 MPHOSPH9Q99550 1183 aa30.6■■■□□ 2.49
RXRB-204ENST00000483281 LMTK2Q8IWU2 1503 aa30.6■■■□□ 2.49
RXRB-204ENST00000483281 ZC3H13Q5T200 1668 aaKnown RBP30.58■■■□□ 2.49
RXRB-204ENST00000483281 WASHC2CQ9Y4E1 1318 aa30.58■■■□□ 2.49
RXRB-204ENST00000483281 SLC4A1APQ9BWU0 796 aaKnown RBP30.57■■■□□ 2.48
RXRB-204ENST00000483281 MLECQ14165 292 aa30.56■■■□□ 2.48
RXRB-204ENST00000483281 DHX57Q6P158 1386 aaKnown RBP30.55■■■□□ 2.48
RXRB-204ENST00000483281 ABCC3O15438 1527 aa30.54■■■□□ 2.48
RXRB-204ENST00000483281 TET3O43151 1660 aa30.54■■■□□ 2.48
RXRB-204ENST00000483281 CEP152O94986 1710 aa30.53■■■□□ 2.48
RXRB-204ENST00000483281 CNTLNQ9NXG0 1405 aa30.49■■■□□ 2.47
RXRB-204ENST00000483281 PKD2Q13563 968 aa30.48■■■□□ 2.47
RXRB-204ENST00000483281 ESF1Q9H501 851 aaKnown RBP30.48■■■□□ 2.47
RXRB-204ENST00000483281 ARHGAP31Q2M1Z3 1444 aa30.47■■■□□ 2.47
RXRB-204ENST00000483281 ADAMTSL3P82987 1691 aa30.47■■■□□ 2.47
RXRB-204ENST00000483281 CLTCQ00610 1675 aaKnown RBP30.46■■■□□ 2.47
RXRB-204ENST00000483281 CAMSAP1Q5T5Y3 1602 aa30.46■■■□□ 2.47
RXRB-204ENST00000483281 EFCAB6Q5THR3 1501 aa30.45■■■□□ 2.47
RXRB-204ENST00000483281 MROH2AA6NES4 1674 aa30.44■■■□□ 2.46
RXRB-204ENST00000483281 E9PCH4 1651 aa30.44■■■□□ 2.46
RXRB-204ENST00000483281 FER1L4A9Z1Z3 1794 aa30.43■■■□□ 2.46
RXRB-204ENST00000483281 RPRD2Q5VT52 1461 aaKnown RBP30.43■■■□□ 2.46
RXRB-204ENST00000483281 CLSPNQ9HAW4 1339 aa30.4■■■□□ 2.46
RXRB-204ENST00000483281 ZMYM3Q14202 1370 aa30.39■■■□□ 2.46
RXRB-204ENST00000483281 NPATQ14207 1427 aa30.38■■■□□ 2.45
RXRB-204ENST00000483281 CCER1Q8TC90 406 aaPredicted RBP30.37■■■□□ 2.45
RXRB-204ENST00000483281 MADDQ8WXG6 1647 aa30.36■■■□□ 2.45
RXRB-204ENST00000483281 FOXD1Q16676 465 aa30.35■■■□□ 2.45
RXRB-204ENST00000483281 ANKRD30BQ9BXX2 1392 aa30.34■■■□□ 2.45
RXRB-204ENST00000483281 PTPRTO14522 1441 aa30.34■■■□□ 2.45
RXRB-204ENST00000483281 CFAP65Q6ZU64 1925 aaKnown RBP30.32■■■□□ 2.44
RXRB-204ENST00000483281 RIMS1Q86UR5 1692 aaKnown RBP30.3■■■□□ 2.44
RXRB-204ENST00000483281 SPHKAPQ2M3C7 1700 aa30.29■■■□□ 2.44
RXRB-204ENST00000483281 PLA2R1Q13018 1463 aa30.28■■■□□ 2.44
RXRB-204ENST00000483281 NOS1P29475 1434 aa30.28■■■□□ 2.44
RXRB-204ENST00000483281 C3P01024 1663 aa30.28■■■□□ 2.44
RXRB-204ENST00000483281 PREX1Q8TCU6 1659 aa30.27■■■□□ 2.44
RXRB-204ENST00000483281 TRPM2O94759 1503 aa30.24■■■□□ 2.43
RXRB-204ENST00000483281 SPATA31D1Q6ZQQ2 1576 aa30.24■■■□□ 2.43
RXRB-204ENST00000483281 ERVK-7P63135 1459 aa30.23■■■□□ 2.43
RXRB-204ENST00000483281 FBXO31Q5XUX0 539 aaPredicted RBP30.23■■■□□ 2.43
RXRB-204ENST00000483281 KDM4FA0A1W2PPD8 638 aa30.21■■■□□ 2.43
RXRB-204ENST00000483281 CEBPAP49715 358 aaPredicted RBP30.19■■■□□ 2.42
RXRB-204ENST00000483281 PTPRMP28827 1452 aa30.18■■■□□ 2.42
RXRB-204ENST00000483281 SLC52A1Q9NWF4 448 aa30.18■■■□□ 2.42
RXRB-204ENST00000483281 SYNMO15061 1565 aa30.18■■■□□ 2.42
RXRB-204ENST00000483281 CCDC144AA2RUR9 1427 aa30.17■■■□□ 2.42
RXRB-204ENST00000483281 SIN3AQ96ST3 1273 aa30.15■■■□□ 2.42
RXRB-204ENST00000483281 SETD1BQ9UPS6 1966 aaKnown RBP30.14■■■□□ 2.42
RXRB-204ENST00000483281 PIK3C2BO00750 1634 aa30.14■■■□□ 2.42
RXRB-204ENST00000483281 TNRQ92752 1358 aa30.12■■■□□ 2.41
RXRB-204ENST00000483281 CLTCL1P53675 1640 aa30.12■■■□□ 2.41
RXRB-204ENST00000483281 IDI1Q13907 227 aa30.09■■■□□ 2.41
RXRB-204ENST00000483281 KIF1BO60333 1816 aa30.07■■■□□ 2.4
RXRB-204ENST00000483281 NEURL4Q96JN8 1562 aa30.07■■■□□ 2.4
RXRB-204ENST00000483281 UGGT1Q9NYU2 1555 aa30.07■■■□□ 2.4
RXRB-204ENST00000483281 NEUROD1Q13562 356 aa30.06■■■□□ 2.4
RXRB-204ENST00000483281 TIMELESSQ9UNS1 1208 aa30.06■■■□□ 2.4
RXRB-204ENST00000483281 NLRP1Q9C000 1473 aa30.05■■■□□ 2.4
RXRB-204ENST00000483281 PLPPR3Q6T4P5 718 aa30.03■■■□□ 2.4
RXRB-204ENST00000483281 SPATA31E1Q6ZUB1 1445 aa30.01■■■□□ 2.39
RXRB-204ENST00000483281 KDM5AP29375 1690 aaKnown RBP30■■■□□ 2.39
RXRB-204ENST00000483281 TMEM131LA2VDJ0 1609 aa29.97■■■□□ 2.39
RXRB-204ENST00000483281 MYO3AQ8NEV4 1616 aa29.96■■■□□ 2.39
RXRB-204ENST00000483281 ADGRB3O60242 1522 aa29.96■■■□□ 2.39
RXRB-204ENST00000483281 A2ML1A8K2U0 1454 aa29.93■■■□□ 2.38
RXRB-204ENST00000483281 TONSLQ96HA7 1378 aa29.93■■■□□ 2.38
RXRB-204ENST00000483281 CHGAP10645 457 aaKnown RBP29.92■■■□□ 2.38
RXRB-204ENST00000483281 ZEB1P37275 1124 aaPredicted RBP29.92■■■□□ 2.38
RXRB-204ENST00000483281 UBR1Q8IWV7 1749 aa29.91■■■□□ 2.38
RXRB-204ENST00000483281 RPGRIP1LQ68CZ1 1315 aa29.91■■■□□ 2.38
RXRB-204ENST00000483281 STAG3Q9UJ98 1225 aa29.91■■■□□ 2.38
RXRB-204ENST00000483281 MYO5BQ9ULV0 1848 aa29.91■■■□□ 2.38
RXRB-204ENST00000483281 STAC3Q96MF2 364 aa29.9■■■□□ 2.38
RXRB-204ENST00000483281 ZNF142P52746 1687 aaPredicted RBP29.9■■■□□ 2.38
RXRB-204ENST00000483281 RGL3Q3MIN7 710 aa29.9■■■□□ 2.38
RXRB-204ENST00000483281 L3MBTL2Q969R5 705 aa29.9■■■□□ 2.38
RXRB-204ENST00000483281 CEP170BQ9Y4F5 1589 aaPredicted RBP29.88■■■□□ 2.37
RXRB-204ENST00000483281 UHRF1BP1Q6BDS2 1440 aa29.87■■■□□ 2.37
RXRB-204ENST00000483281 THEMISQ8N1K5 641 aaPredicted RBP29.86■■■□□ 2.37
RXRB-204ENST00000483281 ZNF326Q5BKZ1 582 aaKnown RBP29.84■■■□□ 2.37
RXRB-204ENST00000483281 IFT172Q9UG01 1749 aa29.82■■■□□ 2.36
RXRB-204ENST00000483281 DCAF11Q8TEB1 546 aa29.81■■■□□ 2.36
RXRB-204ENST00000483281 PPLO60437 1756 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms