RNA–Protein interactions for RNA: ENST00000483145.1

CCDC57-209, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-209ENST00000483145 PCGF6Q9BYE7 350 aa15.75■□□□□ 0.11
CCDC57-209ENST00000483145 ESF1Q9H501 851 aaKnown RBP15.75■□□□□ 0.11
CCDC57-209ENST00000483145 DHX29Q7Z478 1369 aaKnown RBP15.75■□□□□ 0.11
CCDC57-209ENST00000483145 ANKRD50Q9ULJ7 1429 aa15.74■□□□□ 0.11
CCDC57-209ENST00000483145 LMTK3Q96Q04 1460 aa15.73■□□□□ 0.11
CCDC57-209ENST00000483145 SETD5Q9C0A6 1442 aa15.73■□□□□ 0.11
CCDC57-209ENST00000483145 AGLP35573 1532 aa15.72■□□□□ 0.11
CCDC57-209ENST00000483145 RNF17Q9BXT8 1623 aaKnown RBP15.7■□□□□ 0.1
CCDC57-209ENST00000483145 DEPDC5O75140 1603 aa15.69■□□□□ 0.1
CCDC57-209ENST00000483145 RAB3GAP2Q9H2M9 1393 aa15.68■□□□□ 0.1
CCDC57-209ENST00000483145 CEBPAP49715 358 aaPredicted RBP15.68■□□□□ 0.1
CCDC57-209ENST00000483145 HSPA2P54652 639 aa15.68■□□□□ 0.1
CCDC57-209ENST00000483145 UNC13BO14795 1591 aa15.67■□□□□ 0.1
CCDC57-209ENST00000483145 ILDR1Q86SU0 546 aaPredicted RBP15.67■□□□□ 0.1
CCDC57-209ENST00000483145 HRCP23327 699 aa15.66■□□□□ 0.1
CCDC57-209ENST00000483145 PRDM15P57071 1507 aaPredicted RBP15.66■□□□□ 0.1
CCDC57-209ENST00000483145 ACIN1Q9UKV3 1341 aaKnown RBP15.66■□□□□ 0.1
CCDC57-209ENST00000483145 MROH1Q8NDA8 1641 aa15.65■□□□□ 0.1
CCDC57-209ENST00000483145 PREX1Q8TCU6 1659 aa15.64■□□□□ 0.09
CCDC57-209ENST00000483145 KDM5DQ9BY66 1539 aa15.63■□□□□ 0.09
CCDC57-209ENST00000483145 UHRF1BP1Q6BDS2 1440 aa15.63■□□□□ 0.09
CCDC57-209ENST00000483145 CNTLNQ9NXG0 1405 aa15.63■□□□□ 0.09
CCDC57-209ENST00000483145 KIF3BO15066 747 aa15.63■□□□□ 0.09
CCDC57-209ENST00000483145 FAM135AQ9P2D6 1515 aa15.63■□□□□ 0.09
CCDC57-209ENST00000483145 VWDEQ8N2E2 1590 aa15.62■□□□□ 0.09
CCDC57-209ENST00000483145 C3P01024 1663 aa15.61■□□□□ 0.09
CCDC57-209ENST00000483145 SETD1BQ9UPS6 1966 aaKnown RBP15.61■□□□□ 0.09
CCDC57-209ENST00000483145 IQGAP3Q86VI3 1631 aa15.61■□□□□ 0.09
CCDC57-209ENST00000483145 GGT6Q6P531 493 aa15.59■□□□□ 0.09
CCDC57-209ENST00000483145 ZC3H13Q5T200 1668 aaKnown RBP15.59■□□□□ 0.09
CCDC57-209ENST00000483145 PPP6R1Q9UPN7 881 aa15.57■□□□□ 0.08
CCDC57-209ENST00000483145 NUP155O75694 1391 aa15.57■□□□□ 0.08
CCDC57-209ENST00000483145 KANK1Q14678 1352 aa15.57■□□□□ 0.08
CCDC57-209ENST00000483145 LMTK2Q8IWU2 1503 aa15.57■□□□□ 0.08
CCDC57-209ENST00000483145 MROH2AA6NES4 1674 aa15.57■□□□□ 0.08
CCDC57-209ENST00000483145 PZPP20742 1482 aa15.56■□□□□ 0.08
CCDC57-209ENST00000483145 ABCC3O15438 1527 aa15.56■□□□□ 0.08
CCDC57-209ENST00000483145 CEP152O94986 1710 aa15.56■□□□□ 0.08
CCDC57-209ENST00000483145 TET3O43151 1660 aa15.55■□□□□ 0.08
CCDC57-209ENST00000483145 ZMYM3Q14202 1370 aa15.55■□□□□ 0.08
CCDC57-209ENST00000483145 CLTCQ00610 1675 aaKnown RBP15.54■□□□□ 0.08
CCDC57-209ENST00000483145 TRIM52Q96A61 297 aa15.54■□□□□ 0.08
CCDC57-209ENST00000483145 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.54■□□□□ 0.08
CCDC57-209ENST00000483145 DMRT2Q9Y5R5 561 aa15.53■□□□□ 0.08
CCDC57-209ENST00000483145 NPATQ14207 1427 aa15.52■□□□□ 0.08
CCDC57-209ENST00000483145 FBXO41Q8TF61 875 aa15.52■□□□□ 0.08
CCDC57-209ENST00000483145 CAMSAP1Q5T5Y3 1602 aa15.52■□□□□ 0.08
CCDC57-209ENST00000483145 EFCAB6Q5THR3 1501 aa15.52■□□□□ 0.07
CCDC57-209ENST00000483145 WASHC2CQ9Y4E1 1318 aa15.5■□□□□ 0.07
CCDC57-209ENST00000483145 E9PCH4 1651 aa15.49■□□□□ 0.07
CCDC57-209ENST00000483145 ARHGAP31Q2M1Z3 1444 aa15.49■□□□□ 0.07
CCDC57-209ENST00000483145 DHX57Q6P158 1386 aaKnown RBP15.49■□□□□ 0.07
CCDC57-209ENST00000483145 RPRD2Q5VT52 1461 aaKnown RBP15.48■□□□□ 0.07
CCDC57-209ENST00000483145 MPHOSPH9Q99550 1183 aa15.48■□□□□ 0.07
CCDC57-209ENST00000483145 SLC4A1APQ9BWU0 796 aaKnown RBP15.48■□□□□ 0.07
CCDC57-209ENST00000483145 STRCQ7RTU9 1775 aa15.47■□□□□ 0.07
CCDC57-209ENST00000483145 PKD2Q13563 968 aa15.44■□□□□ 0.06
CCDC57-209ENST00000483145 CERKQ8TCT0 537 aa15.44■□□□□ 0.06
CCDC57-209ENST00000483145 MYO3AQ8NEV4 1616 aa15.43■□□□□ 0.06
CCDC57-209ENST00000483145 CFAP65Q6ZU64 1925 aaKnown RBP15.43■□□□□ 0.06
CCDC57-209ENST00000483145 SPHKAPQ2M3C7 1700 aa15.43■□□□□ 0.06
CCDC57-209ENST00000483145 PTPRTO14522 1441 aa15.43■□□□□ 0.06
CCDC57-209ENST00000483145 ZNF142P52746 1687 aaPredicted RBP15.41■□□□□ 0.06
CCDC57-209ENST00000483145 CEP170BQ9Y4F5 1589 aaPredicted RBP15.41■□□□□ 0.06
CCDC57-209ENST00000483145 TRPM2O94759 1503 aa15.4■□□□□ 0.06
CCDC57-209ENST00000483145 SPATA31D1Q6ZQQ2 1576 aa15.4■□□□□ 0.06
CCDC57-209ENST00000483145 ERVK-7P63135 1459 aa15.4■□□□□ 0.06
CCDC57-209ENST00000483145 NOS1P29475 1434 aa15.39■□□□□ 0.05
CCDC57-209ENST00000483145 TNRQ92752 1358 aa15.38■□□□□ 0.05
CCDC57-209ENST00000483145 ANKRD30BQ9BXX2 1392 aa15.38■□□□□ 0.05
CCDC57-209ENST00000483145 FOXD1Q16676 465 aa15.38■□□□□ 0.05
CCDC57-209ENST00000483145 PLA2R1Q13018 1463 aa15.38■□□□□ 0.05
CCDC57-209ENST00000483145 CLSPNQ9HAW4 1339 aa15.38■□□□□ 0.05
CCDC57-209ENST00000483145 NCKAP5LQ9HCH0 1330 aa15.38■□□□□ 0.05
CCDC57-209ENST00000483145 SYNMO15061 1565 aa15.37■□□□□ 0.05
CCDC57-209ENST00000483145 FBXO31Q5XUX0 539 aaPredicted RBP15.37■□□□□ 0.05
CCDC57-209ENST00000483145 A2ML1A8K2U0 1454 aa15.37■□□□□ 0.05
CCDC57-209ENST00000483145 CCER1Q8TC90 406 aaPredicted RBP15.35■□□□□ 0.05
CCDC57-209ENST00000483145 PIK3C2BO00750 1634 aa15.35■□□□□ 0.05
CCDC57-209ENST00000483145 CLTCL1P53675 1640 aa15.33■□□□□ 0.04
CCDC57-209ENST00000483145 CCDC144AA2RUR9 1427 aa15.33■□□□□ 0.04
CCDC57-209ENST00000483145 NLRP1Q9C000 1473 aa15.31■□□□□ 0.04
CCDC57-209ENST00000483145 UGGT1Q9NYU2 1555 aa15.31■□□□□ 0.04
CCDC57-209ENST00000483145 THEMISQ8N1K5 641 aaPredicted RBP15.3■□□□□ 0.04
CCDC57-209ENST00000483145 KIF1BO60333 1816 aa15.29■□□□□ 0.04
CCDC57-209ENST00000483145 NEURL4Q96JN8 1562 aa15.29■□□□□ 0.04
CCDC57-209ENST00000483145 SLC52A1Q9NWF4 448 aa15.29■□□□□ 0.04
CCDC57-209ENST00000483145 KDM5AP29375 1690 aaKnown RBP15.28■□□□□ 0.04
CCDC57-209ENST00000483145 ANKLE2Q86XL3 938 aa15.28■□□□□ 0.04
CCDC57-209ENST00000483145 LTBP4Q8N2S1 1624 aa15.28■□□□□ 0.04
CCDC57-209ENST00000483145 ZNF335Q9H4Z2 1342 aaPredicted RBP15.27■□□□□ 0.04
CCDC57-209ENST00000483145 POLR1AO95602 1720 aaPredicted RBP15.27■□□□□ 0.04
CCDC57-209ENST00000483145 ADGRB3O60242 1522 aa15.27■□□□□ 0.03
CCDC57-209ENST00000483145 IQSEC2Q5JU85 1478 aa15.25■□□□□ 0.03
CCDC57-209ENST00000483145 SPATA31E1Q6ZUB1 1445 aa15.25■□□□□ 0.03
CCDC57-209ENST00000483145 TMEM131LA2VDJ0 1609 aa15.25■□□□□ 0.03
CCDC57-209ENST00000483145 IDI1Q13907 227 aa15.24■□□□□ 0.03
CCDC57-209ENST00000483145 SIN3AQ96ST3 1273 aa15.24■□□□□ 0.03
CCDC57-209ENST00000483145 MYO5BQ9ULV0 1848 aa15.24■□□□□ 0.03
CCDC57-209ENST00000483145 UBR1Q8IWV7 1749 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms