RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 ZNF316A6NFI3 1004 aaPredicted RBP8.03□□□□□ -1.12
R3HDM1-216ENST00000483065 PDE4DQ08499 809 aa8.03□□□□□ -1.12
R3HDM1-216ENST00000483065 TRAF7Q6Q0C0 670 aa8.03□□□□□ -1.12
R3HDM1-216ENST00000483065 RGS22Q8NE09 1264 aa8.03□□□□□ -1.12
R3HDM1-216ENST00000483065 E9PSI1 815 aa8.02□□□□□ -1.13
R3HDM1-216ENST00000483065 NUBP1P53384 320 aa8.02□□□□□ -1.13
R3HDM1-216ENST00000483065 GPIHBP1Q8IV16 184 aa8.02□□□□□ -1.13
R3HDM1-216ENST00000483065 GPR153Q6NV75 609 aa8.01□□□□□ -1.13
R3HDM1-216ENST00000483065 TRIM66O15016 1216 aa8□□□□□ -1.13
R3HDM1-216ENST00000483065 MFAP1P55081 439 aaKnown RBP8□□□□□ -1.13
R3HDM1-216ENST00000483065 ZNF775Q96BV0 537 aaPredicted RBP8□□□□□ -1.13
R3HDM1-216ENST00000483065 PUS7Q96PZ0 661 aaKnown RBP8□□□□□ -1.13
R3HDM1-216ENST00000483065 RBM25P49756 843 aaKnown RBP7.99□□□□□ -1.13
R3HDM1-216ENST00000483065 GOPCQ9HD26 462 aa7.98□□□□□ -1.13
R3HDM1-216ENST00000483065 MTMR7Q9Y216 660 aa7.98□□□□□ -1.13
R3HDM1-216ENST00000483065 IGSF3O75054 1194 aa7.96□□□□□ -1.14
R3HDM1-216ENST00000483065 FBXW7Q969H0 707 aa7.95□□□□□ -1.14
R3HDM1-216ENST00000483065 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.95□□□□□ -1.14
R3HDM1-216ENST00000483065 ARIH1Q9Y4X5 557 aaPredicted RBP7.95□□□□□ -1.14
R3HDM1-216ENST00000483065 PBX2P40425 430 aa7.94□□□□□ -1.14
R3HDM1-216ENST00000483065 GZF1Q9H116 711 aaPredicted RBP7.94□□□□□ -1.14
R3HDM1-216ENST00000483065 LAPTM4AQ15012 233 aa7.92□□□□□ -1.14
R3HDM1-216ENST00000483065 POTEEQ6S8J3 1075 aa7.92□□□□□ -1.14
R3HDM1-216ENST00000483065 PCMTD1Q96MG8 357 aaPredicted RBP7.91□□□□□ -1.14
R3HDM1-216ENST00000483065 FAM117AQ9C073 453 aa7.91□□□□□ -1.14
R3HDM1-216ENST00000483065 ACIN1Q9UKV3 1341 aaKnown RBP7.91□□□□□ -1.14
R3HDM1-216ENST00000483065 PPP1R15AO75807 674 aaPredicted RBP7.9□□□□□ -1.14
R3HDM1-216ENST00000483065 ZNF787Q6DD87 383 aa7.9□□□□□ -1.14
R3HDM1-216ENST00000483065 ZNF467Q7Z7K2 595 aaPredicted RBP7.9□□□□□ -1.14
R3HDM1-216ENST00000483065 PROSER2Q86WR7 435 aaPredicted RBP7.9□□□□□ -1.14
R3HDM1-216ENST00000483065 CLUAP1Q96AJ1 413 aa7.9□□□□□ -1.14
R3HDM1-216ENST00000483065 ONECUT3O60422 494 aaPredicted RBP7.89□□□□□ -1.15
R3HDM1-216ENST00000483065 PDE4AP27815 886 aa7.89□□□□□ -1.15
R3HDM1-216ENST00000483065 DPY19L2Q6NUT2 758 aa7.89□□□□□ -1.15
R3HDM1-216ENST00000483065 ILDR1Q86SU0 546 aaPredicted RBP7.89□□□□□ -1.15
R3HDM1-216ENST00000483065 BOLA1Q9Y3E2 137 aa7.89□□□□□ -1.15
R3HDM1-216ENST00000483065 RSPH4AQ5TD94 716 aa7.88□□□□□ -1.15
R3HDM1-216ENST00000483065 AMOTL2Q9Y2J4 779 aa7.88□□□□□ -1.15
R3HDM1-216ENST00000483065 ADGRD1Q6QNK2 874 aa7.87□□□□□ -1.15
R3HDM1-216ENST00000483065 MINK1Q8N4C8 1332 aaPredicted RBP7.86□□□□□ -1.15
R3HDM1-216ENST00000483065 GOLGA2Q08379 1002 aa7.86□□□□□ -1.15
R3HDM1-216ENST00000483065 FOXD4L5Q5VV16 416 aaPredicted RBP7.86□□□□□ -1.15
R3HDM1-216ENST00000483065 FOXD4L4Q8WXT5 416 aaPredicted RBP7.86□□□□□ -1.15
R3HDM1-216ENST00000483065 KCTD12Q96CX2 325 aaKnown RBP7.86□□□□□ -1.15
R3HDM1-216ENST00000483065 G3V3G9 751 aa7.85□□□□□ -1.15
R3HDM1-216ENST00000483065 RBM26Q5T8P6 1007 aaKnown RBP7.85□□□□□ -1.15
R3HDM1-216ENST00000483065 ZNF777Q9ULD5 760 aaPredicted RBP7.85□□□□□ -1.15
R3HDM1-216ENST00000483065 AXIN2Q9Y2T1 843 aa7.85□□□□□ -1.15
R3HDM1-216ENST00000483065 PDAP1Q13442 181 aaKnown RBP7.84□□□□□ -1.15
R3HDM1-216ENST00000483065 RETREG2Q8NC44 543 aa7.84□□□□□ -1.15
R3HDM1-216ENST00000483065 USP35Q9P2H5 1018 aa7.84□□□□□ -1.15
R3HDM1-216ENST00000483065 PLEKHG3A1L390 1219 aa7.83□□□□□ -1.16
R3HDM1-216ENST00000483065 KCNA1Q09470 495 aa7.83□□□□□ -1.16
R3HDM1-216ENST00000483065 ARSIQ5FYB1 569 aa7.83□□□□□ -1.16
R3HDM1-216ENST00000483065 PYGBP11216 843 aa7.82□□□□□ -1.16
R3HDM1-216ENST00000483065 NLRP6P59044 892 aa7.82□□□□□ -1.16
R3HDM1-216ENST00000483065 MCM6Q14566 821 aa7.82□□□□□ -1.16
R3HDM1-216ENST00000483065 LARP6Q9BRS8 491 aaKnown RBP7.82□□□□□ -1.16
R3HDM1-216ENST00000483065 PCDHB8Q9UN66 801 aa7.82□□□□□ -1.16
R3HDM1-216ENST00000483065 WWC1Q8IX03 1113 aa7.81□□□□□ -1.16
R3HDM1-216ENST00000483065 DDX27Q96GQ7 796 aaKnown RBP7.81□□□□□ -1.16
R3HDM1-216ENST00000483065 CANXP27824 592 aaKnown RBP7.8□□□□□ -1.16
R3HDM1-216ENST00000483065 MFSD10Q14728 455 aa7.8□□□□□ -1.16
R3HDM1-216ENST00000483065 AMHR2Q16671 573 aa7.8□□□□□ -1.16
R3HDM1-216ENST00000483065 HRO43593 1189 aa7.79□□□□□ -1.16
R3HDM1-216ENST00000483065 MFRPQ9BY79 579 aa7.79□□□□□ -1.16
R3HDM1-216ENST00000483065 MAP2K5Q13163 448 aa7.78□□□□□ -1.16
R3HDM1-216ENST00000483065 SPDYE16A6NNV3 312 aaPredicted RBP7.77□□□□□ -1.17
R3HDM1-216ENST00000483065 FNBP4Q8N3X1 1017 aaPredicted RBP7.77□□□□□ -1.17
R3HDM1-216ENST00000483065 SOX12O15370 315 aa7.76□□□□□ -1.17
R3HDM1-216ENST00000483065 GFRA3O60609 400 aa7.76□□□□□ -1.17
R3HDM1-216ENST00000483065 BRD1O95696 1058 aa7.76□□□□□ -1.17
R3HDM1-216ENST00000483065 PTPN5P54829 565 aa7.76□□□□□ -1.17
R3HDM1-216ENST00000483065 CAMK2BQ13554 666 aa7.76□□□□□ -1.17
R3HDM1-216ENST00000483065 IRF5Q13568 498 aa7.75□□□□□ -1.17
R3HDM1-216ENST00000483065 CCDC27Q2M243 656 aa7.75□□□□□ -1.17
R3HDM1-216ENST00000483065 ZNF428Q96B54 188 aa7.75□□□□□ -1.17
R3HDM1-216ENST00000483065 IRF6O14896 467 aa7.74□□□□□ -1.17
R3HDM1-216ENST00000483065 TTLL12Q14166 644 aaPredicted RBP7.74□□□□□ -1.17
R3HDM1-216ENST00000483065 PARP9Q8IXQ6 854 aa7.74□□□□□ -1.17
R3HDM1-216ENST00000483065 KHSRPQ92945 711 aaKnown RBP eCLIP7.74□□□□□ -1.17
R3HDM1-216ENST00000483065 SH3D19Q5HYK7 790 aa7.73□□□□□ -1.17
R3HDM1-216ENST00000483065 CCDC102AQ96A19 550 aa7.73□□□□□ -1.17
R3HDM1-216ENST00000483065 USTQ9Y2C2 406 aa7.73□□□□□ -1.17
R3HDM1-216ENST00000483065 ZNF330Q9Y3S2 320 aaPredicted RBP7.73□□□□□ -1.17
R3HDM1-216ENST00000483065 TK2O00142 265 aa7.72□□□□□ -1.17
R3HDM1-216ENST00000483065 MLLT3P42568 568 aaPredicted RBP7.72□□□□□ -1.17
R3HDM1-216ENST00000483065 SPDYE5A6NIY4 337 aa7.71□□□□□ -1.18
R3HDM1-216ENST00000483065 PRM3Q9NNZ6 103 aa7.71□□□□□ -1.18
R3HDM1-216ENST00000483065 NCKAP5LQ9HCH0 1330 aa7.71□□□□□ -1.18
R3HDM1-216ENST00000483065 SUZ12Q15022 739 aaKnown RBP7.7□□□□□ -1.18
R3HDM1-216ENST00000483065 ATP1B4Q9UN42 357 aaPredicted RBP7.7□□□□□ -1.18
R3HDM1-216ENST00000483065 PPP1R37O75864 691 aa7.69□□□□□ -1.18
R3HDM1-216ENST00000483065 TMEM92Q6UXU6 159 aa7.69□□□□□ -1.18
R3HDM1-216ENST00000483065 CRISPLD2Q9H0B8 497 aa7.69□□□□□ -1.18
R3HDM1-216ENST00000483065 CSB-PGBD3P0DP91 1061 aa7.68□□□□□ -1.18
R3HDM1-216ENST00000483065 PSEN1P49768 467 aa7.68□□□□□ -1.18
R3HDM1-216ENST00000483065 LCE2AQ5TA79 106 aaPredicted RBP7.68□□□□□ -1.18
R3HDM1-216ENST00000483065 STK17AQ9UEE5 414 aa7.68□□□□□ -1.18
R3HDM1-216ENST00000483065 ARHGAP33O14559 1287 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms