RNA–Protein interactions for RNA: ENST00000483062.5

SYN3-212, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-212ENST00000483062 FBXO31Q5XUX0 539 aaPredicted RBP12.95□□□□□ -0.34
SYN3-212ENST00000483062 ZNF777Q9ULD5 760 aaPredicted RBP12.95□□□□□ -0.34
SYN3-212ENST00000483062 CCDC18Q5T9S5 1454 aa12.95□□□□□ -0.34
SYN3-212ENST00000483062 VWDEQ8N2E2 1590 aa12.94□□□□□ -0.34
SYN3-212ENST00000483062 CDC42BPAQ5VT25 1732 aa12.94□□□□□ -0.34
SYN3-212ENST00000483062 INO80Q9ULG1 1556 aaPredicted RBP12.94□□□□□ -0.34
SYN3-212ENST00000483062 MED14O60244 1454 aa12.93□□□□□ -0.34
SYN3-212ENST00000483062 SUPT6HQ7KZ85 1726 aaKnown RBP12.93□□□□□ -0.34
SYN3-212ENST00000483062 TNRQ92752 1358 aa12.93□□□□□ -0.34
SYN3-212ENST00000483062 ANKLE2Q86XL3 938 aa12.92□□□□□ -0.34
SYN3-212ENST00000483062 PLEKHH2Q8IVE3 1493 aa12.91□□□□□ -0.34
SYN3-212ENST00000483062 EHMT2Q96KQ7 1210 aa12.91□□□□□ -0.34
SYN3-212ENST00000483062 CFDP1Q9UEE9 299 aaPredicted RBP12.91□□□□□ -0.34
SYN3-212ENST00000483062 DHX29Q7Z478 1369 aaKnown RBP12.91□□□□□ -0.34
SYN3-212ENST00000483062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.91□□□□□ -0.34
SYN3-212ENST00000483062 NCBP3Q53F19 620 aaKnown RBP12.9□□□□□ -0.34
SYN3-212ENST00000483062 THEMISQ8N1K5 641 aaPredicted RBP12.9□□□□□ -0.34
SYN3-212ENST00000483062 MBD5Q9P267 1494 aa12.9□□□□□ -0.34
SYN3-212ENST00000483062 RTEL1-TNFRSF6BF6WH68 1400 aa12.89□□□□□ -0.35
SYN3-212ENST00000483062 PZPP20742 1482 aa12.89□□□□□ -0.35
SYN3-212ENST00000483062 NPHP4O75161 1426 aaPredicted RBP12.88□□□□□ -0.35
SYN3-212ENST00000483062 MIA2Q96PC5 1412 aa12.88□□□□□ -0.35
SYN3-212ENST00000483062 LRRC7Q96NW7 1537 aa12.88□□□□□ -0.35
SYN3-212ENST00000483062 ZNF644Q9H582 1327 aaPredicted RBP12.88□□□□□ -0.35
SYN3-212ENST00000483062 FYCO1Q9BQS8 1478 aa12.86□□□□□ -0.35
SYN3-212ENST00000483062 NLRP1Q9C000 1473 aa12.85□□□□□ -0.35
SYN3-212ENST00000483062 DEPDC5O75140 1603 aa12.85□□□□□ -0.35
SYN3-212ENST00000483062 POLR1AO95602 1720 aaPredicted RBP12.85□□□□□ -0.35
SYN3-212ENST00000483062 CCNB3Q8WWL7 1395 aa12.84□□□□□ -0.35
SYN3-212ENST00000483062 FAM135AQ9P2D6 1515 aa12.84□□□□□ -0.35
SYN3-212ENST00000483062 KIF3BO15066 747 aa12.84□□□□□ -0.35
SYN3-212ENST00000483062 POTEAQ6S8J7 498 aa12.84□□□□□ -0.35
SYN3-212ENST00000483062 HOXD11P31277 338 aaPredicted RBP12.83□□□□□ -0.36
SYN3-212ENST00000483062 ADGBQ8N7X0 1667 aa12.83□□□□□ -0.36
SYN3-212ENST00000483062 UGGT1Q9NYU2 1555 aa12.82□□□□□ -0.36
SYN3-212ENST00000483062 WASHC2CQ9Y4E1 1318 aa12.82□□□□□ -0.36
SYN3-212ENST00000483062 KDM5DQ9BY66 1539 aa12.82□□□□□ -0.36
SYN3-212ENST00000483062 RNF216Q9NWF9 866 aaPredicted RBP12.81□□□□□ -0.36
SYN3-212ENST00000483062 STRCP1A6NGW2 1772 aa12.81□□□□□ -0.36
SYN3-212ENST00000483062 FAM135BQ49AJ0 1406 aa12.79□□□□□ -0.36
SYN3-212ENST00000483062 RNF17Q9BXT8 1623 aaKnown RBP12.79□□□□□ -0.36
SYN3-212ENST00000483062 IQGAP1P46940 1657 aa12.77□□□□□ -0.36
SYN3-212ENST00000483062 SYNMO15061 1565 aa12.77□□□□□ -0.37
SYN3-212ENST00000483062 LTKP29376 864 aa12.76□□□□□ -0.37
SYN3-212ENST00000483062 RSPH4AQ5TD94 716 aa12.76□□□□□ -0.37
SYN3-212ENST00000483062 MTUS2Q5JR59 1369 aa12.76□□□□□ -0.37
SYN3-212ENST00000483062 DCAF8L1A6NGE4 600 aa12.75□□□□□ -0.37
SYN3-212ENST00000483062 TIAM1Q13009 1591 aa12.75□□□□□ -0.37
SYN3-212ENST00000483062 NCOA2Q15596 1464 aa12.74□□□□□ -0.37
SYN3-212ENST00000483062 ARHGAP23Q9P227 1491 aa12.74□□□□□ -0.37
SYN3-212ENST00000483062 CEP162Q5TB80 1403 aa12.74□□□□□ -0.37
SYN3-212ENST00000483062 ZC3H13Q5T200 1668 aaKnown RBP12.73□□□□□ -0.37
SYN3-212ENST00000483062 ERVK-7P63135 1459 aa12.72□□□□□ -0.37
SYN3-212ENST00000483062 CCDC141Q6ZP82 1450 aa12.72□□□□□ -0.37
SYN3-212ENST00000483062 KCNA4P22459 653 aa12.72□□□□□ -0.37
SYN3-212ENST00000483062 ABCC3O15438 1527 aa12.72□□□□□ -0.37
SYN3-212ENST00000483062 SCAF11Q99590 1463 aaKnown RBP12.72□□□□□ -0.37
SYN3-212ENST00000483062 SRCAPQ6ZRS2 3230 aa12.71□□□□□ -0.37
SYN3-212ENST00000483062 NPM3O75607 178 aaKnown RBP12.71□□□□□ -0.37
SYN3-212ENST00000483062 CACNB1Q02641 598 aaPredicted RBP12.71□□□□□ -0.37
SYN3-212ENST00000483062 SLIT1O75093 1534 aa12.71□□□□□ -0.38
SYN3-212ENST00000483062 TXNDC2Q86VQ3 553 aa12.7□□□□□ -0.38
SYN3-212ENST00000483062 XIRP1Q702N8 1843 aaKnown RBP12.68□□□□□ -0.38
SYN3-212ENST00000483062 TMEM94Q12767 1356 aa12.68□□□□□ -0.38
SYN3-212ENST00000483062 CAMSAP2Q08AD1 1489 aa12.67□□□□□ -0.38
SYN3-212ENST00000483062 EHBP1L1Q8N3D4 1523 aa12.67□□□□□ -0.38
SYN3-212ENST00000483062 KCNA6P17658 529 aa12.66□□□□□ -0.38
SYN3-212ENST00000483062 UPF1Q92900 1129 aaKnown RBP eCLIP12.66□□□□□ -0.38
SYN3-212ENST00000483062 UBR1Q8IWV7 1749 aa12.65□□□□□ -0.38
SYN3-212ENST00000483062 ARHGAP31Q2M1Z3 1444 aa12.65□□□□□ -0.38
SYN3-212ENST00000483062 TSPY4P0CV99 314 aa12.65□□□□□ -0.38
SYN3-212ENST00000483062 TSPY10P0CW01 314 aa12.65□□□□□ -0.38
SYN3-212ENST00000483062 MAP3K1Q13233 1512 aa12.65□□□□□ -0.38
SYN3-212ENST00000483062 MROH1Q8NDA8 1641 aa12.65□□□□□ -0.38
SYN3-212ENST00000483062 ARHGEF5Q12774 1597 aa12.64□□□□□ -0.39
SYN3-212ENST00000483062 TMEM2Q9UHN6 1383 aa12.64□□□□□ -0.39
SYN3-212ENST00000483062 EID1Q9Y6B2 187 aa12.63□□□□□ -0.39
SYN3-212ENST00000483062 TET3O43151 1660 aa12.61□□□□□ -0.39
SYN3-212ENST00000483062 JCADQ9P266 1359 aa12.61□□□□□ -0.39
SYN3-212ENST00000483062 RBM33Q96EV2 1170 aaKnown RBP12.61□□□□□ -0.39
SYN3-212ENST00000483062 SLAIN2Q9P270 581 aa12.61□□□□□ -0.39
SYN3-212ENST00000483062 ROBO1Q9Y6N7 1651 aa12.61□□□□□ -0.39
SYN3-212ENST00000483062 LRRC9Q6ZRR7 1453 aa12.6□□□□□ -0.39
SYN3-212ENST00000483062 PROSER2Q86WR7 435 aaPredicted RBP12.6□□□□□ -0.39
SYN3-212ENST00000483062 PRDM15P57071 1507 aaPredicted RBP12.6□□□□□ -0.39
SYN3-212ENST00000483062 MAST1Q9Y2H9 1570 aa12.6□□□□□ -0.39
SYN3-212ENST00000483062 SETD1AO15047 1707 aaKnown RBP12.59□□□□□ -0.39
SYN3-212ENST00000483062 IDI1Q13907 227 aa12.58□□□□□ -0.4
SYN3-212ENST00000483062 SLC26A8Q96RN1 970 aa12.58□□□□□ -0.4
SYN3-212ENST00000483062 EIF2AK4Q9P2K8 1649 aaKnown RBP12.58□□□□□ -0.4
SYN3-212ENST00000483062 LRP6O75581 1613 aa12.57□□□□□ -0.4
SYN3-212ENST00000483062 NKTRP30414 1462 aaKnown RBP12.57□□□□□ -0.4
SYN3-212ENST00000483062 ZNF772Q68DY9 489 aaPredicted RBP12.56□□□□□ -0.4
SYN3-212ENST00000483062 SPATA31A6Q5VVP1 1343 aa12.56□□□□□ -0.4
SYN3-212ENST00000483062 FGD6Q6ZV73 1430 aa12.55□□□□□ -0.4
SYN3-212ENST00000483062 NWD1Q149M9 1564 aa12.55□□□□□ -0.4
SYN3-212ENST00000483062 MSH6P52701 1360 aa12.55□□□□□ -0.4
SYN3-212ENST00000483062 DUOX2Q9NRD8 1548 aa12.53□□□□□ -0.4
SYN3-212ENST00000483062 PIK3C2BO00750 1634 aa12.53□□□□□ -0.4
SYN3-212ENST00000483062 COL16A1Q07092 1604 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms