RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 A2ML1A8K2U0 1454 aa11.85□□□□□ -0.51
CSDE1-206ENST00000483030 WASHC2CQ9Y4E1 1318 aa11.85□□□□□ -0.51
CSDE1-206ENST00000483030 TNRQ92752 1358 aa11.84□□□□□ -0.51
CSDE1-206ENST00000483030 PIP4K2BP78356 416 aa11.84□□□□□ -0.51
CSDE1-206ENST00000483030 MYO3AQ8NEV4 1616 aa11.84□□□□□ -0.51
CSDE1-206ENST00000483030 HSPA1LP34931 641 aa11.83□□□□□ -0.52
CSDE1-206ENST00000483030 RSPH4AQ5TD94 716 aa11.83□□□□□ -0.52
CSDE1-206ENST00000483030 ANKLE2Q86XL3 938 aa11.83□□□□□ -0.52
CSDE1-206ENST00000483030 CEP162Q5TB80 1403 aa11.83□□□□□ -0.52
CSDE1-206ENST00000483030 TOM1O60784 492 aa11.82□□□□□ -0.52
CSDE1-206ENST00000483030 THEMISQ8N1K5 641 aaPredicted RBP11.82□□□□□ -0.52
CSDE1-206ENST00000483030 TIAM1Q13009 1591 aa11.82□□□□□ -0.52
CSDE1-206ENST00000483030 TSPY4P0CV99 314 aa11.81□□□□□ -0.52
CSDE1-206ENST00000483030 TSPY10P0CW01 314 aa11.81□□□□□ -0.52
CSDE1-206ENST00000483030 ZNF142P52746 1687 aaPredicted RBP11.81□□□□□ -0.52
CSDE1-206ENST00000483030 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.8□□□□□ -0.52
CSDE1-206ENST00000483030 MIA2Q96PC5 1412 aa11.8□□□□□ -0.52
CSDE1-206ENST00000483030 DNMT1P26358 1616 aaKnown RBP11.8□□□□□ -0.52
CSDE1-206ENST00000483030 ADGBQ8N7X0 1667 aa11.8□□□□□ -0.52
CSDE1-206ENST00000483030 EHBP1L1Q8N3D4 1523 aa11.8□□□□□ -0.52
CSDE1-206ENST00000483030 PZPP20742 1482 aa11.79□□□□□ -0.52
CSDE1-206ENST00000483030 CCDC141Q6ZP82 1450 aa11.79□□□□□ -0.52
CSDE1-206ENST00000483030 NCOA2Q15596 1464 aa11.78□□□□□ -0.52
CSDE1-206ENST00000483030 SHANK2Q9UPX8 1470 aa11.78□□□□□ -0.52
CSDE1-206ENST00000483030 CAMSAP2Q08AD1 1489 aa11.76□□□□□ -0.53
CSDE1-206ENST00000483030 CPS1P31327 1500 aa11.76□□□□□ -0.53
CSDE1-206ENST00000483030 KDM5DQ9BY66 1539 aa11.76□□□□□ -0.53
CSDE1-206ENST00000483030 ADRA2BP18089 450 aa11.75□□□□□ -0.53
CSDE1-206ENST00000483030 NPHP4O75161 1426 aaPredicted RBP11.75□□□□□ -0.53
CSDE1-206ENST00000483030 NEURL4Q96JN8 1562 aa11.75□□□□□ -0.53
CSDE1-206ENST00000483030 NLRP1Q9C000 1473 aa11.74□□□□□ -0.53
CSDE1-206ENST00000483030 FAM135AQ9P2D6 1515 aa11.74□□□□□ -0.53
CSDE1-206ENST00000483030 UGGT1Q9NYU2 1555 aa11.73□□□□□ -0.53
CSDE1-206ENST00000483030 MED14O60244 1454 aa11.71□□□□□ -0.53
CSDE1-206ENST00000483030 KANK4Q5T7N3 995 aaPredicted RBP11.71□□□□□ -0.53
CSDE1-206ENST00000483030 VWDEQ8N2E2 1590 aa11.71□□□□□ -0.54
CSDE1-206ENST00000483030 LOC105371045A0A1W2PR82 267 aa11.7□□□□□ -0.54
CSDE1-206ENST00000483030 ARHGEF5Q12774 1597 aa11.7□□□□□ -0.54
CSDE1-206ENST00000483030 TXNDC2Q86VQ3 553 aa11.69□□□□□ -0.54
CSDE1-206ENST00000483030 MED1Q15648 1581 aaPredicted RBP11.69□□□□□ -0.54
CSDE1-206ENST00000483030 LRRC9Q6ZRR7 1453 aa11.69□□□□□ -0.54
CSDE1-206ENST00000483030 LTKP29376 864 aa11.68□□□□□ -0.54
CSDE1-206ENST00000483030 ABCC3O15438 1527 aa11.68□□□□□ -0.54
CSDE1-206ENST00000483030 POLR1AO95602 1720 aaPredicted RBP11.68□□□□□ -0.54
CSDE1-206ENST00000483030 ERVK-7P63135 1459 aa11.67□□□□□ -0.54
CSDE1-206ENST00000483030 DEPDC5O75140 1603 aa11.67□□□□□ -0.54
CSDE1-206ENST00000483030 LRRC7Q96NW7 1537 aa11.66□□□□□ -0.54
CSDE1-206ENST00000483030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.66□□□□□ -0.541e-9■□□□□ 9.9
CSDE1-206ENST00000483030 RRP7BPQ9NSQ0 103 aa11.66□□□□□ -0.54
CSDE1-206ENST00000483030 ALKQ9UM73 1620 aa11.66□□□□□ -0.54
CSDE1-206ENST00000483030 VPS8Q8N3P4 1428 aa11.66□□□□□ -0.54
CSDE1-206ENST00000483030 EID1Q9Y6B2 187 aa11.65□□□□□ -0.54
CSDE1-206ENST00000483030 MYOM3Q5VTT5 1437 aa11.64□□□□□ -0.55
CSDE1-206ENST00000483030 RNF17Q9BXT8 1623 aaKnown RBP11.64□□□□□ -0.55
CSDE1-206ENST00000483030 SCAF11Q99590 1463 aaKnown RBP11.63□□□□□ -0.55
CSDE1-206ENST00000483030 MAST1Q9Y2H9 1570 aa11.63□□□□□ -0.55
CSDE1-206ENST00000483030 IQGAP1P46940 1657 aa11.63□□□□□ -0.55
CSDE1-206ENST00000483030 STAG3Q9UJ98 1225 aa11.63□□□□□ -0.55
CSDE1-206ENST00000483030 KIF15Q9NS87 1388 aa11.62□□□□□ -0.55
CSDE1-206ENST00000483030 DUOX2Q9NRD8 1548 aa11.61□□□□□ -0.55
CSDE1-206ENST00000483030 ABCC5O15440 1437 aa11.6□□□□□ -0.55
CSDE1-206ENST00000483030 ARHGAP31Q2M1Z3 1444 aa11.6□□□□□ -0.55
CSDE1-206ENST00000483030 MROH1Q8NDA8 1641 aa11.6□□□□□ -0.55
CSDE1-206ENST00000483030 STRCP1A6NGW2 1772 aa11.6□□□□□ -0.55
CSDE1-206ENST00000483030 ARHGAP23Q9P227 1491 aa11.6□□□□□ -0.55
CSDE1-206ENST00000483030 IDI1Q13907 227 aa11.6□□□□□ -0.55
CSDE1-206ENST00000483030 RGS17Q9UGC6 210 aaPredicted RBP11.6□□□□□ -0.55
CSDE1-206ENST00000483030 EIF2AK4Q9P2K8 1649 aaKnown RBP11.6□□□□□ -0.55
CSDE1-206ENST00000483030 ZC3H13Q5T200 1668 aaKnown RBP11.59□□□□□ -0.55
CSDE1-206ENST00000483030 TMEM2Q9UHN6 1383 aa11.59□□□□□ -0.55
CSDE1-206ENST00000483030 APLP2Q06481 763 aa11.59□□□□□ -0.55
CSDE1-206ENST00000483030 CHIC2Q9UKJ5 165 aa11.59□□□□□ -0.55
CSDE1-206ENST00000483030 MAP3K1Q13233 1512 aa11.59□□□□□ -0.55
CSDE1-206ENST00000483030 KANK1Q14678 1352 aa11.58□□□□□ -0.56
CSDE1-206ENST00000483030 KCNA6P17658 529 aa11.58□□□□□ -0.56
CSDE1-206ENST00000483030 PROSER2Q86WR7 435 aaPredicted RBP11.58□□□□□ -0.56
CSDE1-206ENST00000483030 RBM33Q96EV2 1170 aaKnown RBP11.58□□□□□ -0.56
CSDE1-206ENST00000483030 SLC26A8Q96RN1 970 aa11.58□□□□□ -0.56
CSDE1-206ENST00000483030 SLIT1O75093 1534 aa11.58□□□□□ -0.56
CSDE1-206ENST00000483030 ERBINQ96RT1 1412 aa11.57□□□□□ -0.56
CSDE1-206ENST00000483030 UBR1Q8IWV7 1749 aa11.57□□□□□ -0.56
CSDE1-206ENST00000483030 TMEM94Q12767 1356 aa11.56□□□□□ -0.56
CSDE1-206ENST00000483030 SYNMO15061 1565 aa11.56□□□□□ -0.56
CSDE1-206ENST00000483030 CEP152O94986 1710 aa11.56□□□□□ -0.56
CSDE1-206ENST00000483030 FAM135BQ49AJ0 1406 aa11.56□□□□□ -0.56
CSDE1-206ENST00000483030 CFAP65Q6ZU64 1925 aaKnown RBP11.55□□□□□ -0.56
CSDE1-206ENST00000483030 DAPK1P53355 1430 aa11.55□□□□□ -0.56
CSDE1-206ENST00000483030 BCANQ96GW7 911 aa11.55□□□□□ -0.56
CSDE1-206ENST00000483030 ANKRD30AQ9BXX3 1397 aa11.54□□□□□ -0.56
CSDE1-206ENST00000483030 PRDM15P57071 1507 aaPredicted RBP11.54□□□□□ -0.56
CSDE1-206ENST00000483030 POTEAQ6S8J7 498 aa11.53□□□□□ -0.56
CSDE1-206ENST00000483030 SLC52A1Q9NWF4 448 aa11.53□□□□□ -0.56
CSDE1-206ENST00000483030 PIK3C2BO00750 1634 aa11.52□□□□□ -0.57
CSDE1-206ENST00000483030 FGD6Q6ZV73 1430 aa11.52□□□□□ -0.57
CSDE1-206ENST00000483030 EFCAB6Q5THR3 1501 aa11.51□□□□□ -0.57
CSDE1-206ENST00000483030 PTPN23Q9H3S7 1636 aa11.51□□□□□ -0.57
CSDE1-206ENST00000483030 SLAIN2Q9P270 581 aa11.51□□□□□ -0.57
CSDE1-206ENST00000483030 NOS1P29475 1434 aa11.51□□□□□ -0.57
CSDE1-206ENST00000483030 FAM50AQ14320 339 aaKnown RBP11.49□□□□□ -0.57
CSDE1-206ENST00000483030 LMTK2Q8IWU2 1503 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms